def test_iop_issueletter(self):
test_infile = os.path.join(self.inputdir, 'iop_ansnn_issueletter.xml')
parser = iop.IOPJATSParser()
with open(test_infile, open_mode_u) as fp:
input_data = fp.read()
test_data = parser.parse(input_data)
output_bibcode = '2021ANSNN..12b5001V'
self.assertEqual(test_data['bibcode'], output_bibcode)
return
def test_iop_parser(self):
test_infile = os.path.join(self.inputdir, 'iop_apj.xml')
parser = iop.IOPJATSParser()
config.REFERENCE_TOPDIR = '/dev/null/'
with open(test_infile) as fp:
test_data = parser.parse(fp)
output_bibcode = '2019ApJ...882...74H'
output_pub = u'The Astrophysical Journal, Volume 882, Issue 2, id.74, <NUMPAGES>13</NUMPAGES> pp.'
output_aff = [u'Department of Physics, The George Washington University, 725 21st St. NW, Washington, DC 20052, USA; The George Washington Astronomy, Physics, and Statistics Institute of Sciences (APSIS), The George Washington University, Washington, DC 20052, USA; Space Sciences Laboratory, 7 Gauss Way, University of California, Berkeley, CA 94720-7450, USA; <id system="ORCID">0000-0002-8548-482X</id>; <email>[email protected]</email>', u'Department of Physics, The George Washington University, 725 21st St. NW, Washington, DC 20052, USA; The George Washington Astronomy, Physics, and Statistics Institute of Sciences (APSIS), The George Washington University, Washington, DC 20052, USA; <id system="ORCID">0000-0002-6447-4251</id>', u'Department of Astronomy & Astrophysics, Pennsylvania State University, 525 Davey Lab, University Park, PA 16802, USA; <id system="ORCID">0000-0002-7481-5259</id>', u'Department of Physics, The George Washington University, 725 21st St. NW, Washington, DC 20052, USA; The George Washington Astronomy, Physics, and Statistics Institute of Sciences (APSIS), The George Washington University, Washington, DC 20052, USA; <id system="ORCID">0000-0001-7833-1043</id>']
self.assertEqual(test_data['bibcode'], output_bibcode)
self.assertEqual(test_data['publication'], output_pub)
self.assertEqual(test_data['affiliations'], output_aff)
return
def test_iop_entities(self):
test_infile = os.path.join(self.inputdir, 'iop_aj_accentnames.xml')
parser = iop.IOPJATSParser()
with open(test_infile, open_mode_u) as fp:
input_data = fp.read()
# Note the earlier format of IOP/STACKS content was NLM, not JATS
# For this particular test, you need to specify the 'lxml' parser,
# to override the jats default 'lxml-xml' (strict) parser
# test_data = parser.parse(input_data)
test_data = parser.parse(input_data, parser='lxml')
output_title = 'Meteoroid Stream of Comet C/1961 T1 (Seki) and Its Relation to the December &rgr;-Virginids and γ-Sagittariids'
output_authors = 'Neslušan, Luboš; Hajduková, Mária'
output_affiliations = [
'Astronomical Institute, Slovak Academy of Science, 05960 Tatranská Lomnica, Slovakia; <ID system="ORCID">0000-0001-9758-1144</ID> <EMAIL>[email protected]</EMAIL>',
'Astronomical Institute, Slovak Academy of Science, Dúbravská cesta 9, 84504 Bratislava, Slovakia; <ID system="ORCID">0000-0002-7837-2627</ID>'
]
self.assertEqual(test_data['title'], output_title)
self.assertEqual(test_data['authors'], output_authors)
self.assertEqual(test_data['affiliations'], output_affiliations)
return
def test_iop_parser(self):
test_infile = os.path.join(self.inputdir, 'iop_apj.xml')
parser = iop.IOPJATSParser()
with open(test_infile, open_mode_u) as fp:
input_data = fp.read()
test_data = parser.parse(input_data)
# # save temporary copy of data structure
# target_saved = test_infile.replace('input','parsed') + '.parsed.NEW'
# with open(target_saved, 'w') as fp:
# json.dump(test_data, fp, sort_keys=True, indent=4)
output_bibcode = '2019ApJ...882...74H'
output_pub = u'The Astrophysical Journal, Volume 882, Issue 2, id.74, <NUMPAGES>13</NUMPAGES> pp.'
output_aff = [
u'Department of Physics, The George Washington University, 725 21st St. NW, Washington, DC 20052, USA; The George Washington Astronomy, Physics, and Statistics Institute of Sciences (APSIS), The George Washington University, Washington, DC 20052, USA; Space Sciences Laboratory, 7 Gauss Way, University of California, Berkeley, CA 94720-7450, USA; <ID system="ORCID">0000-0002-8548-482X</ID> <EMAIL>[email protected]</EMAIL>',
u'Department of Physics, The George Washington University, 725 21st St. NW, Washington, DC 20052, USA; The George Washington Astronomy, Physics, and Statistics Institute of Sciences (APSIS), The George Washington University, Washington, DC 20052, USA; <ID system="ORCID">0000-0002-6447-4251</ID>',
u'Department of Astronomy & Astrophysics, Pennsylvania State University, 525 Davey Lab, University Park, PA 16802, USA; <ID system="ORCID">0000-0002-7481-5259</ID>',
u'Department of Physics, The George Washington University, 725 21st St. NW, Washington, DC 20052, USA; The George Washington Astronomy, Physics, and Statistics Institute of Sciences (APSIS), The George Washington University, Washington, DC 20052, USA; <ID system="ORCID">0000-0001-7833-1043</ID>'
]
self.assertEqual(test_data['bibcode'], output_bibcode)
self.assertEqual(test_data['publication'], output_pub)
self.assertEqual(test_data['affiliations'], output_aff)
return