class MasterTrigger(db.Model):
__tablename__ = 'MasterTrigger'
masterTriggerId = db.Column(db.Integer, primary_key=True, unique=True)
nameInEventLog = db.Column(db.String(255))
triggerDevice = db.Column(db.Integer)
descriptionJson = db.Column(db.JSON)
class SampleDeliveryDevice(db.Model):
__tablename__ = 'SampleDeliveryDevice'
sampleDeliveryDeviceId = db.Column(db.Integer,
primary_key=True,
unique=True)
type = db.Column(
db.ENUM('photoChip', 'microFluidics', 'viscoousJet', 'tapeDevice'))
descriptionJson = db.Column(db.JSON)
class CrystalSizeDistribution(db.Model):
__tablename__ = 'CrystalSizeDistribution'
crystalSizeDistributionId = db.Column(db.Integer,
primary_key=True,
unique=True)
crystalHabit = db.Column(db.String(255))
characteristicDimensions = db.Column(db.String(255))
minDimension = db.Column(db.String(255), info='comma separated floats')
maxDimension = db.Column(db.String(255), info='comma separated floats')
class CrystalSlurryHasCrystal(db.Model):
__tablename__ = 'CrystalSlurry_has_Crystal'
CrystalSlurryHasCrystalId = db.Column(db.Integer,
primary_key=True,
unique=True)
crystalSlurryId = db.Column(db.ForeignKey('CrystalSlurry.crystalSlurryId'),
nullable=False,
index=True)
crystalId = db.Column(db.Integer, nullable=False)
CrystalSlurry = db.relationship(
'CrystalSlurry',
primaryjoin=
'CrystalSlurryHasCrystal.crystalSlurryId == CrystalSlurry.crystalSlurryId'
)
class CrystalSlurry(db.Model):
__tablename__ = 'CrystalSlurry'
crystalSlurryId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(db.String(255))
crystalSizeDistributionId = db.Column(
db.ForeignKey('CrystalSizeDistribution.crystalSizeDistributionId'),
index=True)
crystalDensity = db.Column(db.Float, info='1/mm3')
bufferId = db.Column(db.Float, info='reference to Buffer.bufferId')
CrystalSizeDistribution = db.relationship(
'CrystalSizeDistribution',
primaryjoin=
'CrystalSlurry.crystalSizeDistributionId == CrystalSizeDistribution.crystalSizeDistributionId'
)
class Micrograph(db.Model):
__tablename__ = 'Micrograph'
micrographId = db.Column(db.Integer, primary_key=True, unique=True)
crystalSlurryId = db.Column(db.ForeignKey('CrystalSlurry.crystalSlurryId'),
nullable=False,
index=True)
url = db.Column(db.String(255))
objectSidePixelSize = db.Column(db.String(255),
info='comma separated two floats')
descriptionJson = db.Column(db.JSON)
CrystalSlurry = db.relationship(
'CrystalSlurry',
primaryjoin=
'Micrograph.crystalSlurryId == CrystalSlurry.crystalSlurryId')
class EventTrain(db.Model):
__tablename__ = 'EventTrain'
eventTrainId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(db.String(255))
timeOn = db.Column(db.Float, info='sec')
duration = db.Column(db.Float, info='sec')
period = db.Column(db.Float)
numberOfRepetitions = db.Column(db.Float)
nameInEventLog = db.Column(db.String(255))
triggerDevice = db.Column(db.String(255))
class TimedExcitation(db.Model):
__tablename__ = 'TimedExcitation'
timedExcitationId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(db.String(255))
repeatedSequenceId = db.Column(
db.ForeignKey('RepeatedSequence.repeatedSequenceId'), index=True)
eventTrainId = db.Column(db.ForeignKey('EventTrain.eventTrainId'),
index=True)
ssxExcitation = db.Column(db.String(255))
EventTrain = db.relationship(
'EventTrain',
primaryjoin='TimedExcitation.eventTrainId == EventTrain.eventTrainId')
RepeatedSequence = db.relationship(
'RepeatedSequence',
primaryjoin=
'TimedExcitation.repeatedSequenceId == RepeatedSequence.repeatedSequenceId'
)
class ExperimentalPlan(db.Model):
__tablename__ = 'ExperimentalPlan'
experimentalPlanId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(db.String(255))
numberOfRepetitions = db.Column(
db.Integer, info='for micro-fluidic, jet, tape but not for chip')
period = db.Column(db.Float,
info='seconds but unknown/self adjusting for chip')
masterTriggerId = db.Column(db.ForeignKey('MasterTrigger.masterTriggerId'),
index=True)
repeatedSequenceId = db.Column(
db.ForeignKey('RepeatedSequence.repeatedSequenceId'),
nullable=False,
index=True)
MasterTrigger = db.relationship(
'MasterTrigger',
primaryjoin=
'ExperimentalPlan.masterTriggerId == MasterTrigger.masterTriggerId')
RepeatedSequence = db.relationship(
'RepeatedSequence',
primaryjoin=
'ExperimentalPlan.repeatedSequenceId == RepeatedSequence.repeatedSequenceId'
)
class SampleStock(db.Model):
__tablename__ = 'SampleStock'
sampleStockId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(db.String(255), nullable=False)
crystalSlurryId = db.Column(db.ForeignKey('CrystalSlurry.crystalSlurryId'),
nullable=False,
index=True)
concentrationFactor = db.Column(db.Float, nullable=False)
crystalDensity = db.Column(db.Float, nullable=False)
additiveId = db.Column(db.Integer, info='reference to Additive.additiveId')
note = db.Column(db.String(255))
CrystalSlurry = db.relationship(
'CrystalSlurry',
primaryjoin=
'SampleStock.crystalSlurryId == CrystalSlurry.crystalSlurryId')
class TimedXrayDetection(db.Model):
__tablename__ = 'TimedXrayDetection'
timedXrayDetectionId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(db.String(255))
repeatedSequenceId = db.Column(
db.ForeignKey('RepeatedSequence.repeatedSequenceId'), index=True)
eventTrainId = db.Column(db.ForeignKey('EventTrain.eventTrainId'),
index=True)
numberOfInternalTriggers = db.Column(db.Integer)
internalTriggerPeriod = db.Column(db.Integer)
internalGateDuration = db.Column(db.Integer)
EventTrain = db.relationship(
'EventTrain',
primaryjoin='TimedXrayDetection.eventTrainId == EventTrain.eventTrainId'
)
RepeatedSequence = db.relationship(
'RepeatedSequence',
primaryjoin=
'TimedXrayDetection.repeatedSequenceId == RepeatedSequence.repeatedSequenceId'
)
class SsxDataAcquisition(db.Model):
__tablename__ = 'SsxDataAcquisition'
ssxDataAcquisitionId = db.Column(db.Integer, primary_key=True, unique=True)
loadedSampleId = db.Column(db.ForeignKey('LoadedSample.loadedSampleId'),
nullable=False,
index=True)
dataCollectionId = db.Column(
db.Integer,
nullable=False,
info='reference to DataCollection.dataCollectionId')
experimentalPlanId = db.Column(
db.ForeignKey('ExperimentalPlan.experimentalPlanId'),
nullable=False,
index=True)
eventLogFilename = db.Column(db.String(255),
nullable=False,
info='url to shorlist file')
dataSetId = db.Column(db.ForeignKey('DataSet.dataSetId'),
nullable=False,
index=True)
autoprocessingProgrammId = db.Column(
db.Integer, info='reference to AutoProcProgram.autoProcProgramId')
DataSet = db.relationship(
'DataSet',
primaryjoin='SsxDataAcquisition.dataSetId == DataSet.dataSetId')
ExperimentalPlan = db.relationship(
'ExperimentalPlan',
primaryjoin=
'SsxDataAcquisition.experimentalPlanId == ExperimentalPlan.experimentalPlanId'
)
LoadedSample = db.relationship(
'LoadedSample',
primaryjoin=
'SsxDataAcquisition.loadedSampleId == LoadedSample.loadedSampleId')
class TimedXrayExposure(db.Model):
__tablename__ = 'TimedXrayExposure'
timedXrayExposureId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(db.String(255))
repeatedSequenceId = db.Column(
db.ForeignKey('RepeatedSequence.repeatedSequenceId'), index=True)
eventTrainId = db.Column(db.ForeignKey('EventTrain.eventTrainId'),
index=True)
timedBunches = db.Column(db.String(255))
shutter = db.Column(db.String(255))
EventTrain = db.relationship(
'EventTrain',
primaryjoin='TimedXrayExposure.eventTrainId == EventTrain.eventTrainId'
)
RepeatedSequence = db.relationship(
'RepeatedSequence',
primaryjoin=
'TimedXrayExposure.repeatedSequenceId == RepeatedSequence.repeatedSequenceId'
)
class LoadedSample(db.Model):
__tablename__ = 'LoadedSample'
loadedSampleId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(
db.String(255),
info='to be used as part of the image and processing file names')
sampleStockId = db.Column(db.ForeignKey('SampleStock.sampleStockId'),
index=True)
sampleDeliveryDeviceId = db.Column(
db.ForeignKey('SampleDeliveryDevice.sampleDeliveryDeviceId'),
index=True)
loadingPattern = db.Column(db.Integer)
descriptionJson = db.Column(db.JSON)
SampleDeliveryDevice = db.relationship(
'SampleDeliveryDevice',
primaryjoin=
'LoadedSample.sampleDeliveryDeviceId == SampleDeliveryDevice.sampleDeliveryDeviceId'
)
SampleStock = db.relationship(
'SampleStock',
primaryjoin='LoadedSample.sampleStockId == SampleStock.sampleStockId')
class DataSet(db.Model):
__tablename__ = 'DataSet'
dataSetId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(db.String(255), nullable=False)
mergedResultsFilename = db.Column(db.String(255))
class RepeatedSequence(db.Model):
__tablename__ = 'RepeatedSequence'
repeatedSequenceId = db.Column(db.Integer, primary_key=True, unique=True)
name = db.Column(db.String(255))
