Beispiel #1
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 def test_poisson_ratio_setter(self, strain_stress_object_0):
     facade = StressFacade(strain_stress_object_0['stresses']['diagonal'])
     facade.poisson_ratio = 0.0
     assert facade.poisson_ratio == pytest.approx(0.0)
     for selection in ('11', '22', '33'):
         facade.selection = selection
         assert_allclose(facade.stress.values,
                         to_megapascal(facade.youngs_modulus *
                                       facade.strain.values),
                         atol=1)
Beispiel #2
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    def test_x_y_z(self, strain_stress_object_1):
        facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])
        assert_allclose(facade.x, np.arange(10))
        assert_allclose(facade.y, np.zeros(10))
        assert_allclose(facade.z, np.zeros(10))

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-strain'])
        assert_allclose(facade.x, np.arange(9))
        assert_allclose(facade.y, np.zeros(9))
        assert_allclose(facade.z, np.zeros(9))
Beispiel #3
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 def test_youngs_modulus_setter(self, strain_stress_object_0):
     facade = StressFacade(strain_stress_object_0['stresses']['diagonal'])
     facade.youngs_modulus *= 2
     assert facade.youngs_modulus == pytest.approx(8. / 3)
     facade.selection = '11'
     assert_allclose(facade.stress.values,
                     2 * np.array([300, 340, 380, 420, 460]),
                     atol=1)
     facade.selection = '22'
     assert_allclose(facade.stress.values,
                     2 * np.array([400, 440, 480, 520, 560]),
                     atol=1)
     facade.selection = '33'
     assert_allclose(facade.stress.values,
                     2 * np.array([500, 540, 580, 620, 660]),
                     atol=1)
Beispiel #4
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    def test_d_reference_field(self, strain_stress_object_1):
        r"""Get the reference lattice spacing"""

        for stress_type in ('diagonal', 'in-plane-strain', 'in-plane-stress'):
            facade = StressFacade(
                strain_stress_object_1['stresses'][stress_type])
            assert_allclose(facade.d_reference.values, np.ones(facade.size))

        # "pollute" the reference spacing of run 1235
        stress = strain_stress_object_1['stresses']['diagonal']
        strain_single_1235 = stress.strain22.strains[0]
        strain_single_1235.set_d_reference([1.001, 0.1])
        facade = StressFacade(stress)
        with pytest.raises(AssertionError) as exception_info:
            facade.d_reference
        assert 'reference spacings are different on different directions' in str(
            exception_info.value)
Beispiel #5
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 def test_extend_to_stacked_point_list(self, strain_stress_object_1):
     stress = strain_stress_object_1['stresses']['diagonal']
     facade = StressFacade(stress)
     facade.selection == '1235'
     field = stress.strain22.strains[
         0].field  # scalar field sample for run 1235
     assert_allclose(field.values,
                     to_microstrain([0.01, 0.02, 0.03, 0.04]),
                     atol=1)
     field_extended = facade._extend_to_stacked_point_list(field)
     nan = float('nan')
     assert_allclose(field_extended.values,
                     to_microstrain([
                         nan, 0.01, 0.02, 0.03, 0.04, nan, nan, nan, nan,
                         nan
                     ]),
                     atol=1)
Beispiel #6
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    def test_strain_workspace(self, strain_stress_object_1):
        r"""Export the strains to a MDHistoWorkspace"""
        facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])
        for selection, expected in [
            ('11', [0.0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, nanf,
                    nanf]),
            ('1234',
             [0.0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, nanf, nanf]),
            ('22',
             [nanf, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, nanf]),
            ('1235',
             [nanf, 0.01, 0.02, 0.03, 0.04, nanf, nanf, nanf, nanf, nanf]),
            ('1236',
             [nanf, nanf, nanf, nanf, 0.045, 0.05, 0.06, 0.07, 0.08, nanf]),
            ('33',
             [nanf, nanf, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, 0.09]),
            ('1237',
             [nanf, nanf, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, 0.09])
        ]:
            facade.selection = selection
            assert_workspace(facade, 'strain', to_microstrain(expected))

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-strain'])
        for selection, expected in [
            ('11', [0.0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, nanf]),
            ('1234', [0.0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, nanf]),
            ('22', [nanf, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08]),
            ('1235', [nanf, 0.01, 0.02, 0.03, 0.04, nanf, nanf, nanf, nanf]),
            ('1236', [nanf, nanf, nanf, nanf, 0.045, 0.05, 0.06, 0.07, 0.08]),
            ('33', [0.00, 0.00, 0.00, 0.00, 0.00, 0.00, 0.00, 0.00, 0.00])
        ]:
            facade.selection = selection
            assert_workspace(facade, 'strain', to_microstrain(expected))

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-stress'])
        for selection, expected in [
            ('11', [0.0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, nanf]),
            ('1234', [0.0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, nanf]),
            ('22', [nanf, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08]),
            ('1235', [nanf, 0.01, 0.02, 0.03, 0.04, nanf, nanf, nanf, nanf]),
            ('1236', [nanf, nanf, nanf, nanf, 0.045, 0.05, 0.06, 0.07, 0.08]),
            ('33',
             [nanf, -0.02, -0.04, -0.06, -0.08, -0.10, -0.12, -0.14, nanf])
        ]:
            facade.selection = selection
            assert_workspace(facade, 'strain', to_microstrain(expected))
Beispiel #7
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 def test_init(self, strain_stress_object_1):
     for stress in strain_stress_object_1['stresses'].values():
         facade = StressFacade(stress)
         assert facade
         assert facade._stress_cache['11'] == facade._stress.stress11
         assert facade._strain_cache['11'] == facade._stress.strain11
         assert facade._strain_cache[
             '1234'] == facade._stress.strain11.strains[0]
         assert facade._strain_cache[
             '1236'] == facade._stress.strain22.strains[1]
         assert facade._stress_cache['33'] == facade._stress.stress33
         assert facade._strain_cache['33'] == facade._stress.strain33
Beispiel #8
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    def test_stress_field(self, strain_stress_object_1):
        r"""Stresses along a particular direction. Also for a run number, when a direction contains only one run
        number"""
        facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])
        facade.selection = '1234'
        with pytest.raises(ValueError) as exception_info:
            facade.stress.values
        assert 'Stress can only be computed for directions' in str(
            exception_info.value)

        for direction, expected in [
            ('11', [nanf, nanf, 80, 120, 160, 200, 240, 280, nanf, nanf]),
            ('22', [nanf, nanf, 80, 120, 160, 200, 240, 280, nanf, nanf]),
            ('33', [nanf, nanf, 80, 120, 160, 200, 240, 280, nanf, nanf])
        ]:
            facade.selection = direction
            assert_allclose(facade.stress.values, expected, atol=1)

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-strain'])
        for direction, expected in [
            ('11', [nanf, 30, 60, 90, 120, 150, 180, 210, nanf]),
            ('22', [nanf, 30, 60, 90, 120, 150, 180, 210, nanf]),
            ('33', [nanf, 20, 40, 60, 80, 100, 120, 140, nanf])
        ]:
            facade.selection = direction
            assert_allclose(facade.stress.values, expected, atol=1)

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-stress'])
        for direction, expected in [
            ('11', [nanf, 30, 60, 90, 120, 150, 180, 210, nanf]),
            ('22', [nanf, 30, 60, 90, 120, 150, 180, 210, nanf]),
            ('33', [0.00, 0.00, 0.00, 0.00, 0.00, 0.00, 0.00, 0.00, 0.00])
        ]:
            facade.selection = direction
            assert_allclose(facade.stress.values, expected, atol=1)
Beispiel #9
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 def test_direction(self, strain_stress_object_1):
     r"""Select run numbers or directions"""
     facade = StressFacade(
         strain_stress_object_1['stresses']['in-plane-stress'])
     facade.selection = '11'
     assert facade.direction == '11'
     facade.selection = '1234'
     assert facade.direction == '11'
     facade.selection = '1235'
     assert facade.direction == '22'
     facade.selection = '33'
     assert facade.direction == '33'
Beispiel #10
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def test_write_full_33calculated_nan_csv(test_data_dir: str):

    sample11 = StrainField(test_data_dir + '/HB2B_1331.h5', peak_tag='peak0')
    sample22 = StrainField(test_data_dir + '/HB2B_1332.h5', peak_tag='peak0')

    stress = StressField(sample11,
                         sample22,
                         None,
                         200,
                         0.3,
                         stress_type='in-plane-strain')  # type: ignore
    stress_facade = StressFacade(stress)

    stress_csv_filename = 'HB2B_StressStrain_peak0_Full_33Calculated_1331_1332.csv'
    stress_csv = SummaryGeneratorStress(stress_csv_filename, stress_facade)
    stress_csv.write_full_csv()

    # cleanup
    remove(stress_csv_filename)
Beispiel #11
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def test_write_summary_csv(test_data_dir: str, project_tags: str,
                           expected_file: str):

    sample11 = StrainField(test_data_dir +
                           '/HB2B_{}.h5'.format(project_tags[0]))
    sample22 = StrainField(test_data_dir +
                           '/HB2B_{}.h5'.format(project_tags[1]))
    sample33 = StrainField(test_data_dir +
                           '/HB2B_{}.h5'.format(project_tags[2]))

    stress = StressField(sample11, sample22, sample33, 200, 0.3)
    stress_facade = StressFacade(stress)

    stress_csv_filename = 'HB2B_StressStrain_peak0_Summary.csv'
    stress_csv = SummaryGeneratorStress(stress_csv_filename, stress_facade)
    stress_csv.write_summary_csv()

    assert (cmp(stress_csv_filename, expected_file))
    # cleanup
    remove(stress_csv_filename)
Beispiel #12
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    def test_d_workspace(self, strain_stress_object_1):
        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-strain'])

        for selection, expected in [
            ('11', [1.00, 1.01, 1.02, 1.03, 1.04, 1.05, 1.06, 1.07, nanf]),
            ('1234', [1.00, 1.01, 1.02, 1.03, 1.04, 1.05, 1.06, 1.07, nanf]),
            ('22', [nanf, 1.01, 1.02, 1.03, 1.04, 1.05, 1.06, 1.07, 1.08]),
            ('1235', [nanf, 1.01, 1.02, 1.03, 1.04, nanf, nanf, nanf, nanf]),
            ('1236', [nanf, nanf, nanf, nanf, 1.045, 1.05, 1.06, 1.07, 1.08])
        ]:
            facade.selection = selection
            assert_workspace(facade, 'd', expected)

        facade.selection = '33'
        with pytest.raises(ValueError) as exception_info:
            facade.workspace('d')
        assert 'd-spacing not measured along 33 when in in-plane-strain' in str(
            exception_info.value)
Beispiel #13
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 def test_peak_parameters(self, strain_stress_object_1):
     facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])
     assert set(facade.peak_parameters) == {
         'd', 'Center', 'Height', 'FWHM', 'Mixing', 'A0', 'A1', 'Intensity'
     }
Beispiel #14
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 def test_point_list(self, strain_stress_object_1):
     stress = strain_stress_object_1['stresses']['diagonal']
     facade = StressFacade(stress)
     assert facade.point_list == stress.point_list
Beispiel #15
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    def __init__(self, filename: str, stress_input):
        """Initialization

        Parameters
        ----------
        filename: str
            Name of the '.csv' file to write
        stress_input: can either be StressField or StressFacade
            stress field input to generate summary or full csv files
        """
        # do file name checks
        if not filename:
            raise RuntimeError('Failed to supply output filename for Stress CSV output')

        self._error_postfix = ' when creating stress file: ' + str(filename) + '\n'

        if not filename.endswith('.csv'):
            raise RuntimeError('File name must end with extension ".csv"' + self._error_postfix)

        # check for length of lists
        self._filename: str = str(filename)

        if isinstance(stress_input, StressField):
            self._stress_facade: StressFacade = StressFacade(stress_input)
            self._stress = stress_input
        elif isinstance(stress_input, StressFacade):
            self._stress_facade: StressFacade = stress_input  # type: ignore
            self._stress = self._stress_facade._stress
        else:
            raise RuntimeError(
                'Error: SummaryGeneratorStress stress input must be of type StressField or StressFacade'
                + self._error_postfix)

        self._strain33_is_calculated = False

        # check for filenames in StrainField per direction
        for direction in SummaryGeneratorStress.directions:
            strain = self._get_strain_field(direction)
            assert isinstance(strain, StrainField)

            # add exception if filenames is empty for 11 and 22 directions
            if not strain.filenames:
                if direction == '11' or direction == '22':
                    raise RuntimeError('StrainField filenames in direction ' + str(direction) +
                                       ' can\'t be empty for Stress CSV output ' + self._filename)
                elif direction == '33':
                    self._strain33_is_calculated = True

        # placeholder for caching peak_collection data as peak_collection.get_
        # function calls are expensive
        # key: type ( 'd0', 'd', 'FWHM', 'Peak_Height' )
        # value: Dict
        #        key: direction ( ''1' , '22', '33' )
        #        value: [0]-> value [1]-> error 1D numpy arrays
        self._peak_colllections_data: Dict[str, Dict[str, Tuple[np.ndarray, np.ndarray]]] = {}
        # initialize empty dictionaries keys
        self._peak_colllections_data['d'] = dict()
        for field in SummaryGeneratorStress.fields_3dir:
            self._peak_colllections_data[field] = dict()
            for direction in SummaryGeneratorStress.directions:
                self._peak_colllections_data[field][direction] = (np.ndarray, np.ndarray)

        # used to cache summary csv fields
        self._stress_field: Dict[str, Tuple[np.ndarray, np.ndarray]] = {}
        self._strain_field: Dict[str, Tuple[np.ndarray, np.ndarray]] = {}

        for direction in SummaryGeneratorStress.directions:
            self._stress_field[direction] = (np.ndarray, np.ndarray)
            self._strain_field[direction] = (np.ndarray, np.ndarray)
Beispiel #16
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 def stress(self, stress):
     self._stress = stress
     if stress is None:
         self._stress_facade = None
     else:
         self._stress_facade = StressFacade(stress)
Beispiel #17
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 def test_poisson_ratio(self, strain_stress_object_1):
     facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])
     assert facade.poisson_ratio == pytest.approx(1. / 3)
Beispiel #18
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    def test_strain_field(self, strain_stress_object_1):
        r"""strains along for a particular direction or run number"""
        facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])
        # direction 11 and components
        facade.selection = '11'
        expected = to_microstrain(
            [0.0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, nanf, nanf])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        facade.selection = '1234'
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        # direction 22 and components
        facade.selection = '22'
        expected = to_microstrain(
            [nanf, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, nanf])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        facade.selection = '1235'
        expected = to_microstrain(
            [nanf, 0.01, 0.02, 0.03, 0.04, nanf, nanf, nanf, nanf, nanf])
        facade.selection = '1236'
        expected = to_microstrain(
            [nanf, nanf, nanf, nanf, 0.045, 0.05, 0.06, 0.07, 0.08, nanf])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        # direction 33 and components
        facade.selection = '33'
        expected = to_microstrain(
            [nanf, nanf, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, 0.09])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        facade.selection = '1237'
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-strain'])
        # direction 11 and components
        facade.selection = '11'
        expected = to_microstrain(
            [0.0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, nanf])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        facade.selection = '1234'
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        # direction 22 and components
        facade.selection = '22'
        expected = to_microstrain(
            [nanf, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        facade.selection = '1235'
        expected = to_microstrain(
            [nanf, 0.01, 0.02, 0.03, 0.04, nanf, nanf, nanf, nanf])
        facade.selection = '1236'
        expected = to_microstrain(
            [nanf, nanf, nanf, nanf, 0.045, 0.05, 0.06, 0.07, 0.08])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        # direction 33 and components
        facade.selection = '33'
        expected = to_microstrain(
            [0.00, 0.00, 0.00, 0.00, 0.00, 0.00, 0.00, 0.00, 0.00])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-stress'])
        # direction 11 and components
        facade.selection = '11'
        expected = to_microstrain(
            [0.0, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, nanf])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        facade.selection = '1234'
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        # direction 22 and components
        facade.selection = '22'
        expected = to_microstrain(
            [nanf, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        facade.selection = '1235'
        expected = to_microstrain(
            [nanf, 0.01, 0.02, 0.03, 0.04, nanf, nanf, nanf, nanf])
        facade.selection = '1236'
        expected = to_microstrain(
            [nanf, nanf, nanf, nanf, 0.045, 0.05, 0.06, 0.07, 0.08])
        assert_allclose(facade.strain.values, expected, equal_nan=True, atol=1)
        # direction 33 and components
        facade.selection = '33'
        expected = to_microstrain(
            [nanf, -0.02, -0.04, -0.06, -0.08, -0.10, -0.12, -0.14, nanf])
Beispiel #19
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 def test_youngs_modulus(self, strain_stress_object_1):
     facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])
     assert facade.youngs_modulus == pytest.approx(4. / 3)
Beispiel #20
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    def test_peak_parameter_workspace(self, strain_stress_object_1):
        r"""Retrieve the effective peak parameters for a particular run, or for a particular direction"""
        facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])

        facade.selection = '11'
        expected = [100, 110, 120, 130, 140, 150, 160, 170, nanf, nanf]
        assert_workspace(facade, 'Intensity', expected)
        facade.selection = '1234'
        expected = [100, 110, 120, 130, 140, 150, 160, 170, nanf, nanf]
        assert_workspace(facade, 'Intensity', expected)

        facade.selection = '22'
        expected = [nanf, 1.1, 1.2, 1.3, 1.4, 1.5, 1.6, 1.7, 1.8, nanf]
        assert_workspace(facade, 'FWHM', expected)
        facade.selection = '1235'
        expected = [nanf, 1.1, 1.2, 1.3, 1.4, nanf, nanf, nanf, nanf, nanf]
        assert_workspace(facade, 'FWHM', expected)
        facade.selection = '1236'
        expected = [nanf, nanf, nanf, nanf, 14., 15., 16., 17., 18., nanf]
        assert_workspace(facade, 'A0', expected)

        facade.selection = '33'
        expected = [nanf, nanf, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, 0.09]
        assert_workspace(facade, 'A1', expected)
        facade.selection = '1237'
        expected = [nanf, nanf, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, 0.09]
        assert_workspace(facade, 'A1', expected)

        with pytest.raises(AssertionError) as exception_info:
            facade.workspace('center')
        assert 'Peak parameter must be one of' in str(exception_info.value)
Beispiel #21
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 def test_d_field(self, strain_stress_object_1):
     r"""Retrieve the d spacing for a particular direction and for a particular run"""
     facade = StressFacade(
         strain_stress_object_1['stresses']['in-plane-strain'])
     # Peak parameters can only be retrieved for run numbers
     facade.selection = '11'
     expected = [1.00, 1.01, 1.02, 1.03, 1.04, 1.05, 1.06, 1.07, nanf]
     assert_allclose(facade.peak_parameter('d').values,
                     expected,
                     equal_nan=True)
     facade.selection = '1234'
     assert_allclose(facade.peak_parameter('d').values,
                     expected,
                     equal_nan=True)
     facade.selection = '22'
     expected = [nanf, 1.01, 1.02, 1.03, 1.04, 1.05, 1.06, 1.07, 1.08]
     assert_allclose(facade.peak_parameter('d').values,
                     expected,
                     equal_nan=True)
     facade.selection = '1235'
     expected = [nanf, 1.01, 1.02, 1.03, 1.04, nanf, nanf, nanf, nanf]
     assert_allclose(facade.peak_parameter('d').values,
                     expected,
                     equal_nan=True)
     facade.selection = '1236'
     expected = [nanf, nanf, nanf, nanf, 1.045, 1.05, 1.06, 1.07, 1.08]
     assert_allclose(facade.peak_parameter('d').values,
                     expected,
                     equal_nan=True)
     facade.selection = '33'
     with pytest.raises(ValueError) as exception_info:
         facade.peak_parameter('d')
     assert 'd-spacing not measured along 33 when in in-plane-strain' in str(
         exception_info.value)
Beispiel #22
0
    def test_runs(self, strain_stress_object_1):
        r"""Find runs for a particular direction"""
        facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])
        assert facade.runs('11') == ['1234']
        assert facade.runs('22') == ['1235', '1236']
        assert facade.runs('33') == ['1237']
        assert facade._all_runs() == ['1234', '1235', '1236', '1237']

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-strain'])
        assert facade.runs('33') == []
        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-stress'])
        assert facade.runs('33') == []
        assert facade._all_runs() == ['1234', '1235', '1236']
Beispiel #23
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    def test_peak_parameter_field(self, strain_stress_object_1):
        r"""Retrieve the effective peak parameters for a particular run, or for a particular direction"""
        facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])

        facade.selection = '11'
        expected = [100, 110, 120, 130, 140, 150, 160, 170, nanf, nanf]
        assert_allclose(facade.peak_parameter('Intensity').values,
                        expected,
                        equal_nan=True)
        facade.selection = '1234'
        with pytest.raises(AssertionError) as exception_info:
            facade.peak_parameter('center')
        assert 'Peak parameter must be one of' in str(exception_info.value)
        facade.selection = '1234'
        expected = [100, 110, 120, 130, 140, 150, 160, 170, nanf, nanf]
        assert_allclose(facade.peak_parameter('Intensity').values,
                        expected,
                        equal_nan=True)

        facade.selection = '22'
        expected = [nanf, 1.1, 1.2, 1.3, 1.4, 1.5, 1.6, 1.7, 1.8, nanf]
        assert_allclose(facade.peak_parameter('FWHM').values,
                        expected,
                        equal_nan=True)
        facade.selection = '1235'
        expected = [nanf, 1.1, 1.2, 1.3, 1.4, nanf, nanf, nanf, nanf, nanf]
        assert_allclose(facade.peak_parameter('FWHM').values,
                        expected,
                        equal_nan=True)
        facade.selection = '1236'
        expected = [nanf, nanf, nanf, nanf, 14., 15., 16., 17., 18., nanf]
        assert_allclose(facade.peak_parameter('A0').values,
                        expected,
                        equal_nan=True)

        facade.selection = '33'
        expected = [nanf, nanf, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, 0.09]
        assert_allclose(facade.peak_parameter('A1').values,
                        expected,
                        equal_nan=True)
        facade.selection = '1237'
        expected = [nanf, nanf, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, 0.09]
        assert_allclose(facade.peak_parameter('A1').values,
                        expected,
                        equal_nan=True)

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-strain'])
        facade.selection = '33'
        with pytest.raises(ValueError) as exception_info:
            facade.peak_parameter('Intensity')
        assert 'Intensity not measured along 33 when in in-plane-strain'

        facade = StressFacade(
            strain_stress_object_1['stresses']['in-plane-stress'])
        facade.selection = '33'
        with pytest.raises(ValueError) as exception_info:
            facade.peak_parameter('FWHM')
        assert 'FWHM not measured along 33 when in in-plane-stress'
Beispiel #24
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 def test_stress_type(self, strain_stress_object_1):
     for stress_type in ('diagonal', 'in-plane-strain', 'in-plane-stress'):
         facade = StressFacade(
             strain_stress_object_1['stresses'][stress_type])
         assert facade.stress_type == stress_type
Beispiel #25
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 def test_d_reference_workspace(self, strain_stress_object_1):
     for stress_type in ('diagonal', 'in-plane-strain', 'in-plane-stress'):
         facade = StressFacade(
             strain_stress_object_1['stresses'][stress_type])
         assert_workspace(facade, 'd_reference', np.ones(facade.size))
Beispiel #26
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    def test_set_d_reference(self, strain_stress_object_0,
                             strain_stress_object_1):
        r"""
        strain_stress_object_0: strains stacked, all have the same set of sample points
        strain_stress_object_1: strains stacked, having different set of sample points
        """
        #
        # Using strain_stress_object_0
        #
        facade = StressFacade(strain_stress_object_0['stresses']['diagonal'])
        #
        # Case single value (errors assumed 0.0)
        facade.d_reference = 2.0
        assert_allclose(facade.d_reference.values, 2.0 * np.ones(facade.size))
        assert_allclose(facade.d_reference.errors, np.zeros(facade.size))
        #
        # Case single value and error, passing different types of objects
        for d_update in [(2.0, 0.20), [2.1, 0.21], np.array([2.2, 0.22])]:
            value, error = d_update
            facade.d_reference = d_update
            assert_allclose(facade.d_reference.values,
                            value * np.ones(facade.size))
            assert_allclose(facade.d_reference.errors,
                            error * np.ones(facade.size))
        #
        # Case scalar field with d_reference update for all sample points
        values = 1.0 + 0.1 * np.arange(
            facade.size)  # (1.0, 1.1, 1.2, 1.3, 1.4)
        d_update = ScalarFieldSample('d_reference', values, 0.1 * values,
                                     facade.x, facade.y, facade.z)
        facade.d_reference = d_update
        assert_allclose(facade.d_reference.values, values)
        assert_allclose(facade.d_reference.errors, 0.1 * values)
        #
        # Case scalar field with d_reference update for some sample points
        facade.d_reference = (1.0, 0.0)  # "reset" d_reference
        assert_allclose(facade.d_reference.values, [1.0, 1.0, 1.0, 1.0, 1.0])
        assert_allclose(facade.d_reference.errors, [0.0, 0.0, 0.0, 0.0, 0.0])
        indexes = [
            0, 2, 4
        ]  # indexes of the sample points whose d_reference will be updated
        d_update = ScalarFieldSample('d_reference', values[indexes],
                                     0.1 * values[indexes], facade.x[indexes],
                                     facade.y[indexes], facade.z[indexes])
        facade.d_reference = d_update
        assert_allclose(facade.d_reference.values, [1.0, 1.0, 1.2, 1.0, 1.4])
        assert_allclose(facade.d_reference.errors,
                        [0.10, 0.00, 0.12, 0.00, 0.14])
        #
        # Using strain_stress_object_1
        #
        facade = StressFacade(strain_stress_object_1['stresses']['diagonal'])
        #
        # Case single value (errors assumed 0.0)
        facade.d_reference = 2.0
        assert_allclose(facade.d_reference.values, 2.0 * np.ones(facade.size))
        assert_allclose(facade.d_reference.errors, np.zeros(facade.size))
        #
        # Case single value and error, passing different types of objects
        for d_update in [(2.0, 0.20), [2.1, 0.21], np.array([2.2, 0.22])]:
            value, error = d_update
            facade.d_reference = d_update
            assert_allclose(facade.d_reference.values,
                            value * np.ones(facade.size))
            assert_allclose(facade.d_reference.errors,
                            error * np.ones(facade.size))
        #
        # Case scalar field with d_reference update for all sample points
        values = 1.0 + 0.1 * np.arange(facade.size)  # (1.0, 1.1,.., 1.9)
        d_update = ScalarFieldSample('d_reference', values, 0.1 * values,
                                     facade.x, facade.y, facade.z)
        facade.d_reference = d_update
        assert_allclose(facade.d_reference.values, values)
        assert_allclose(facade.d_reference.errors, 0.1 * values)
        #
        # Case scalar field with d_reference update for some sample points
        values = 1.0 + 0.1 * np.arange(facade.size)  # [1.0, 1.1,.., 1.9]
        errors = 0.1 * values  # [0.1, 0.11,..,0.19]
        facade.d_reference = (1.0, 0.0)  # "reset" d_reference
        assert_allclose(facade.d_reference.values, np.ones(facade.size))
        assert_allclose(facade.d_reference.errors, np.zeros(facade.size))
        indexes = [
            0, 2, 4, 6, 8
        ]  # indexes of the sample points whose d_reference will be updated
        d_update = ScalarFieldSample('d_reference', values[indexes],
                                     errors[indexes], facade.x[indexes],
                                     facade.y[indexes], facade.z[indexes])
        facade.d_reference = d_update
        assert_allclose(
            facade.d_reference.values,
            [1.00, 1.00, 1.20, 1.00, 1.40, 1.00, 1.60, 1.00, 1.80, 1.00])
        assert_allclose(
            facade.d_reference.errors,
            [0.10, 0.00, 0.12, 0.00, 0.14, 0.00, 0.16, 0.00, 0.18, 0.00])

        # What about d_reference for each strain direction and single strain?
        # d_reference along the 11 direction
        d_reference_11 = facade._stress.strain11.get_d_reference().values
        assert_allclose(
            d_reference_11,
            [1.00, 1.00, 1.20, 1.00, 1.40, 1.00, 1.60, 1.00, nanf, nanf])
        # d_reference for the single strain field with run 1234
        d_reference_1234 = facade._stress.strain11.strains[0].get_d_reference(
        ).values
        assert_allclose(d_reference_1234,
                        [1.00, 1.00, 1.20, 1.00, 1.40, 1.00, 1.60, 1.00])

        d_reference_22 = facade._stress.strain22.get_d_reference().values
        assert_allclose(
            d_reference_22,
            [nanf, 1.00, 1.20, 1.00, 1.40, 1.00, 1.60, 1.00, 1.80, nanf])
        d_reference_1235 = facade._stress.strain22.strains[0].get_d_reference(
        ).values
        assert_allclose(d_reference_1235, [1.00, 1.20, 1.00, 1.40])
        d_reference_1236 = facade._stress.strain22.strains[1].get_d_reference(
        ).values
        assert_allclose(d_reference_1236, [1.40, 1.00, 1.60, 1.00, 1.80])

        d_reference_33 = facade._stress.strain33.get_d_reference().values
        assert_allclose(
            d_reference_33,
            [nanf, nanf, 1.20, 1.00, 1.40, 1.00, 1.60, 1.00, 1.80, 1.00])
        d_reference_1237 = facade._stress.strain33.strains[0].get_d_reference(
        ).values
        assert_allclose(d_reference_1237,
                        [1.20, 1.00, 1.40, 1.00, 1.60, 1.00, 1.80, 1.00])