def run_slitlet_mef(metadata, prev_suffix, curr_suffix, ns=False):
full_obs_list = get_full_obs_list(metadata)
sci_obs_list = get_sci_obs_list(metadata)
std_obs_list = get_std_obs_list(metadata)
sky_obs_list = get_sky_obs_list(metadata)
ns_proc_list = sci_obs_list+std_obs_list
# check the slitlet definition file
if os.path.isfile(slitlet_def_fn):
slitlet_fn = slitlet_def_fn
else:
slitlet_fn=None
for fn in full_obs_list:
in_fn = '%s%s.p%s.fits' % (out_dir, fn, prev_suffix)
out_fn = '%s%s.p%s.fits' % (out_dir, fn, curr_suffix)
if skip_done and os.path.isfile(out_fn):
continue
print 'Creating MEF file for %s' % in_fn.split('/')[-1]
if ns and fn in ns_proc_list:
sky_fn = '%s%s.s%s.fits' % (out_dir, fn, curr_suffix)
pywifes.wifes_slitlet_mef_ns(in_fn, out_fn, sky_fn,
data_hdu=my_data_hdu,
slitlet_def_file=slitlet_fn)
else:
pywifes.wifes_slitlet_mef(in_fn, out_fn, data_hdu=my_data_hdu,
slitlet_def_file=slitlet_fn)
gc.collect()
return
def run_slitlet_mef(metadata, prev_suffix, curr_suffix, ns=False):
full_obs_list = get_full_obs_list(metadata)
sci_obs_list = get_sci_obs_list(metadata)
std_obs_list = get_std_obs_list(metadata)
sky_obs_list = get_sky_obs_list(metadata)
ns_proc_list = sci_obs_list+std_obs_list
# check the slitlet definition file
if os.path.isfile(slitlet_def_fn):
slitlet_fn = slitlet_def_fn
else:
slitlet_fn=None
for fn in full_obs_list:
in_fn = os.path.join(out_dir, '%s.p%s.fits' % (fn, prev_suffix))
out_fn = os.path.join(out_dir, '%s.p%s.fits' % (fn, curr_suffix))
if skip_done and os.path.isfile(out_fn):
continue
print('Creating MEF file for %s' % in_fn.split('/')[-1])
if ns and fn in ns_proc_list:
sky_fn = os.path.join(out_dir, '%s.s%s.fits' % (fn, curr_suffix))
pywifes.wifes_slitlet_mef_ns(in_fn, out_fn, sky_fn,
data_hdu=my_data_hdu,
slitlet_def_file=slitlet_fn)
else:
pywifes.wifes_slitlet_mef(in_fn, out_fn, data_hdu=my_data_hdu,
slitlet_def_file=slitlet_fn)
gc.collect()
return
ns_proc_list = sci_obs_list+std_obs_list
# check the slitlet definition file
if os.path.isfile(slitlet_def_fn):
slitlet_fn = slitlet_def_fn
else:
slitlet_fn=None
for fn in full_obs_list:
in_fn = os.path.join(out_dir, '%s.p%s.fits' % (fn, prev_suffix))
out_fn = os.path.join(out_dir, '%s.p%s.fits' % (fn, curr_suffix))
if skip_done and os.path.isfile(out_fn):
continue
print('Creating MEF file for %s' % in_fn.split('/')[-1])
if ns and fn in ns_proc_list:
sky_fn = os.path.join(out_dir, '%s.s%s.fits' % (fn, curr_suffix))
pywifes.wifes_slitlet_mef_ns(in_fn, out_fn, sky_fn,
data_hdu=my_data_hdu,
slitlet_def_file=slitlet_fn)
else:
pywifes.wifes_slitlet_mef(in_fn, out_fn, data_hdu=my_data_hdu,
slitlet_def_file=slitlet_fn)
gc.collect()
return
#------------------------------------------------------
# Wavelength solution
def run_wave_soln(metadata, prev_suffix, curr_suffix, **args):
# First, generate the master arc solution, based on generic arcs
wsol_in_fn = os.path.join(out_dir, '%s.p%s.fits' % ( metadata['arc'][0],
prev_suffix))
print('Deriving master wavelength solution from %s' % wsol_in_fn.split('/')[-1])
pywifes.derive_wifes_wave_solution(wsol_in_fn, wsol_out_fn,
**args)