def _execEmanProcess(self, numRun, iterN):
clsFn = self._getFileName("cls", run=numRun, iter=iterN)
classesFn = self._getFileName("classes", run=numRun, iter=iterN)
angles = self._getFileName('angles', iter=iterN)
if not exists(angles) and exists(self._getFileName('clsEven', run=numRun, iter=iterN)):
proc = createEmanProcess(args='read %s %s %s %s'
% (self._getParticlesStack(), clsFn, classesFn,
self._getBaseName('angles', iter=iterN)),
direc=self._getExtraPath())
proc.wait()
def _getIterData(self, it):
from convert import writeSqliteIterData
data_sqlite = self._getFileName('data_scipion', iter=it)
partSet = self._getInputParticles()
if not exists(data_sqlite):
clsFn = self._getFileName("cls", run=self._getRun(), iter=it)
classesFn = self._getFileName("classes", run=self._getRun(), iter=it)
angles = self._getBaseName('angles', iter=it)
proc = createEmanProcess(args='read %s %s %s %s'
% (self._getParticlesStack(), clsFn, classesFn, angles),
direc=self._getExtraPath())
proc.wait()
writeSqliteIterData(partSet, data_sqlite, self._createItemMatrix, self._iterTextFile(it))
return data_sqlite
