def _defineParams(self, form):
ProtMonitor._defineParams(self, form)
group1 = form.addGroup('Experiment')
group1.addParam('proposal', params.StringParam,
label="Proposal",
help="Proposal")
group1.addParam('sampleAcronym', params.StringParam,
label="Sample acronym",
help="Name of the sample acronym")
group1.addParam('proteinAcronym', params.StringParam,
label="Protein acronym",
help="Name of the protein acronym")
group2 = form.addGroup('Parameters')
group2.addParam('db', params.EnumParam,
choices=["production", "valid", "lindemaria", "test"],
label="Database",
help="Select which ISPyB database you want to use.")
group2.addParam('allParamsJsonFile', params.StringParam,
label="All parameters json file",
help="Json file containing all parameters from processing.")
def setFailed(self, errorMsg):
#print("en el setfailed")
#sys.out.flush()
for child in self.childs:
if child.isRunning() or child.isScheduled():
#child.setFailed(errorMsg)
self.getProject().stopProtocol(child)
ProtMonitor.setFailed(self, errorMsg)
def setAborted(self):
#print("en el setaborted")
#sys.out.flush()
for child in self.childs:
if child.isRunning() or child.isScheduled():
#child.setAborted()
self.getProject().stopProtocol(child)
ProtMonitor.setAborted(self)
def _defineParams(self, form):
ProtMonitor._defineParams(self, form)
group = form.addGroup('Experiment')
group.addParam('visit', params.StringParam,
label="Visit",
help="Visit. If you're using test data, you can enter cm14451-2")
form.addParam('db', params.EnumParam,
choices=["production", "devel", "test"],
label="Database",
help="Select which ISPyB database you want to use.")
def _defineParams(self, form):
ProtMonitor._defineParams(self, form)
group = form.addGroup('Experiment')
group.addParam('visit', params.StringParam,
label="Visit",
help="Visit")
form.addParam('db', params.EnumParam,
choices=["production", "devel", "test"],
label="Database",
help="Select which ISPyB database you want to use.")
def __init__(self, **kwargs):
ProtMonitor.__init__(self, **kwargs)
self._runIds = pwobj.CsvList(pType=int)
self.childs = []