def test_save_single_rarefaction_plots(self):
'''save_single_rarefaction_plots: this generates a plot with raw
rarefaction data on a plot and tests whether a file is generated'''
filename1 = '/tmp/testcol_0_row_0_raw.png'
self._paths_to_clean_up = [filename1]
exp = {
'test': {'groups': {'SampleID': {'Sample1': {'groupcolor': '#ff0000',
'raw_link':
'html_plots/testcol_0_row_0_raw.png',
'groupsamples': ['Sample1']}}},
'samples': {'Sample1': {'color': '#ff0000',
'link': 'html_plots/testcol_0_row_0.png'}}}}
obs = save_single_rarefaction_plots(self.sample_dict,
self.imagetype, self.metric_name,
self.data_colors, self.colors, '/tmp/',
self.background_color, self.label_color, self.resolution,
self.ymax, self.xmax,
self.rarefaction_legend_mat, self.groups,
self.mapping_category, 'Sample1', self.mapping_lookup)
self.assertEqual(obs, exp)
self.assertTrue(exists(filename1))
def test_save_single_rarefaction_plots(self):
'''save_single_rarefaction_plots: this generates a plot with raw
rarefaction data on a plot and tests whether a file is generated'''
filename1 = '/tmp/testcol_0_row_0_raw.png'
self._paths_to_clean_up = [filename1]
exp = {
'test': {'groups': {'SampleID': {'Sample1': {'groupcolor': '#ff0000',
'raw_link':
'html_plots/testcol_0_row_0_raw.png',
'groupsamples': ['Sample1']}}},
'samples': {'Sample1': {'color': '#ff0000',
'link': 'html_plots/testcol_0_row_0.png'}}}}
obs = save_single_rarefaction_plots(self.sample_dict,
self.imagetype, self.metric_name,
self.data_colors, self.colors, '/tmp/',
self.background_color, self.label_color, self.resolution,
self.ymax, self.xmax,
self.rarefaction_legend_mat, self.groups,
self.mapping_category, 'Sample1', self.mapping_lookup)
self.assertEqual(obs, exp)
self.assertTrue(exists(filename1))
def test_save_single_rarefaction_plots(self):
"""save_single_rarefaction_plots: this generates a plot with raw
rarefaction data on a plot and tests whether a file is generated"""
filename1 = "/tmp/testcol_0_row_0_raw.png"
self._paths_to_clean_up = [filename1]
exp = {
"test": {
"groups": {
"SampleID": {
"Sample1": {
"groupcolor": "#ff0000",
"raw_link": "html_plots/testcol_0_row_0_raw.png",
"groupsamples": ["Sample1"],
}
}
},
"samples": {"Sample1": {"color": "#ff0000", "link": "html_plots/testcol_0_row_0.png"}},
}
}
obs = save_single_rarefaction_plots(
self.sample_dict,
self.imagetype,
self.metric_name,
self.data_colors,
self.colors,
"/tmp/",
self.background_color,
self.label_color,
self.resolution,
self.ymax,
self.xmax,
self.rarefaction_legend_mat,
self.groups,
self.mapping_category,
"Sample1",
self.mapping_lookup,
)
self.assertEqual(obs, exp)
self.assertTrue(exists(filename1))