def outputFiles(self):
self.parseSettings()
output_settings = self.processInputFiles()
print('Found {0} files to process with the following settings:'.format(
len(self.files)))
settings = {
"indir": self.indir,
"outdir": self.outdir,
"image_type:": self.image_type,
"height:": self.height,
"width": self.width,
"depth": self.bit_depth
}
pp = pprint.PrettyPrinter(indent=4)
pp.pprint(settings)
# The following needs to happen in a separate thread from the main GUI thread.
# The task will be I/O bound and will freeze the main GUI unless
# execution happens in a separate QThread.
if output_settings:
self.thread = WorkerThread(task='GEN_DAT_FILES',
path=self.indir,
outpath=self.outdir,
files=self.files,
imht=self.height,
imwd=self.width,
bits=self.bytes_per_pixel,
byte=self.byte_order)
self.thread.done.connect(self.outputFinished)
print("Beginning File Output ...")
self.thread.start()
else:
print("Error Parsing Input Files ...")
return
"""
def outputFiles(self):
self.parseSettings()
output_settings = self.processInputFiles()
print('Found {0} files to process with the following settings:'.format(len(self.files)))
settings = {"indir": self.indir,
"outdir": self.outdir,
"image_type:": self.image_type,
"height:": self.height,
"width": self.width,
"depth": self.bit_depth}
pp = pprint.PrettyPrinter(indent=4)
pp.pprint(settings)
# The following needs to happen in a separate thread from the main GUI thread.
# The task will be I/O bound and will freeze the main GUI unless
# execution happens in a separate QThread.
if output_settings:
self.thread = WorkerThread(task='GEN_DAT_FILES',
path=self.indir,
outpath=self.outdir,
files=self.files,
imht=self.height,
imwd=self.width,
bits=self.bytes_per_pixel,
byte=self.byte_order
)
self.thread.done.connect(self.outputFinished)
print("Beginning File Output ...")
self.thread.start()
else:
print("Error Parsing Input Files ...")
return
"""
class GenDatWindow(QtGui.QWidget):
"""
"""
def __init__(self, parent=None):
super(QtGui.QWidget, self).__init__(parent)
self.setWindowTitle("Enter Image Settings")
main_vbox = QtGui.QVBoxLayout()
indir_hbox = QtGui.QHBoxLayout()
self.indir_button = QtGui.QPushButton("Select Input Directory", self)
self.indir_textarea = QtGui.QLineEdit(self)
indir_hbox.addWidget(self.indir_button)
indir_hbox.addWidget(self.indir_textarea)
self.indir_button.clicked.connect(self.getInputDirectory)
main_vbox.addLayout(indir_hbox)
outdir_hbox = QtGui.QHBoxLayout()
self.outdir_button = QtGui.QPushButton("Select Output Directory", self)
self.outdir_textarea = QtGui.QLineEdit(self)
indir_hbox.addWidget(self.outdir_button)
indir_hbox.addWidget(self.outdir_textarea)
self.outdir_button.clicked.connect(self.getOutputDirectory)
main_vbox.addLayout(outdir_hbox)
image_type_hbox = QtGui.QHBoxLayout()
self.image_type_menu = QtGui.QComboBox(self)
self.image_type_menu.addItem("TIFF")
self.image_type_menu.addItem("PNG")
self.image_label = QtGui.QLabel("Select Input Image Type")
image_type_hbox.addWidget(self.image_type_menu)
image_type_hbox.addWidget(self.image_label)
main_vbox.addLayout(image_type_hbox)
main_vbox.addWidget(self.h_line())
# self.test_button = QtGui.QPushButton("Test ...", self)
# main_vbox.addWidget(self.test_button)
setting_hbox = QtGui.QHBoxLayout()
self.height_label = QtGui.QLabel("Enter Image Height (int)")
self.height_text = QtGui.QLineEdit(self)
setting_hbox.addWidget(self.height_label)
setting_hbox.addWidget(self.height_text)
self.width_label = QtGui.QLabel("Enter Image Width (int)")
self.width_text = QtGui.QLineEdit(self)
setting_hbox.addWidget(self.width_label)
setting_hbox.addWidget(self.width_text)
self.depth_label = QtGui.QLabel("Select Image Byte Depth")
self.depth_menu = QtGui.QComboBox(self)
self.depth_menu.addItem("8-bit")
self.depth_menu.addItem("16-bit")
setting_hbox.addWidget(self.depth_label)
setting_hbox.addWidget(self.depth_menu)
main_vbox.addLayout(setting_hbox)
main_vbox.addWidget(self.h_line())
button_box = QtGui.QHBoxLayout()
button_box.addStretch()
self.cancel_button = QtGui.QPushButton("Cancel", self)
self.cancel_button.clicked.connect(lambda: self.close())
self.output_button = QtGui.QPushButton("Output Files", self)
self.output_button.clicked.connect(self.outputFiles)
button_box.addWidget(self.cancel_button)
button_box.addWidget(self.output_button)
main_vbox.addLayout(button_box)
self.setLayout(main_vbox)
self.indir = None
self.outdir = None
self.height = None
self.width = None
print("Use Window to Enter file settings then click OutputFiles ...")
self.show()
def h_line(self):
f = QtGui.QFrame()
f.setFrameShape(QtGui.QFrame.HLine)
f.setFrameShadow(QtGui.QFrame.Sunken)
return f
def getInputDirectory(self):
self.indir = str(
QtGui.QFileDialog.getExistingDirectory(
parent=None,
caption="Select Directory Containing Input Files"))
if self.indir:
# not None
self.indir_textarea.setText(self.indir)
return
def getOutputDirectory(self):
self.outdir = str(
QtGui.QFileDialog.getExistingDirectory(
parent=None, caption="Select Directory for Output Files"))
if self.outdir:
# not None
self.outdir_textarea.setText(self.outdir)
return
def parseSettings(self):
if not self.outdir:
print("Select an Output Directory.")
return
if not self.indir:
print("Select an Input Directory")
self.image_type = self.image_type_menu.currentText()
self.height = int(self.height_text.text())
if not self.height:
print("Enter a height.")
return
self.width = int(self.width_text.text())
if not self.width:
print("Enter a height.")
return
self.bit_depth = self.depth_menu.currentText()
def processInputFiles(self):
if self.image_type == "TIFF":
exts = [".tiff", ".TIFF", ".tif", ".TIF"]
elif self.image_type == "PNG":
exts = [".png", ".PNG"]
else:
print("Error: Unknown Image Type {}".format(self.image_type))
return False
self.files = []
for ext in exts:
for name in os.listdir(self.indir):
if name.endswith(ext):
self.files.append(name)
if not self.files:
print("Error: No Files found in directory {} with extensions {}".
format(self.indir, exts))
return False
if self.image_type in ['.tif', '.tiff', '.TIF', '.TIFF']:
try:
print('Parsing file {0}'.format(
os.path.join(self.indir, self.files[0])))
self.byte_order = LF.parse_tiff_header(
os.path.join(self.indir, self.files[0]), self.widthw,
self.heighth, self.bit_depth)
except LF.ParseError as e:
print(
"Failed to parse tiff header; defaulting to big endian bye order"
)
print(e.message)
print(e.errors)
byte_order = 'B' # default to big endian
else:
# PNG and JPEG always use Big Endian
self.byte_order = 'B' # default to big endian
# swap to numpy syntax
if self.byte_order == 'L':
self.byte_order = '<'
elif self.byte_order == 'B':
self.byte_order = '>'
if self.bit_depth == '16-bit':
self.bytes_per_pixel = 2
elif self.bit_depth == '8-bit':
self.bytes_per_pixel = 1
else:
print(
"Error: Unknown image bit_depth. Only 8bit and 16-bit images can be processed."
)
return False
# All settings are ready to output files
return True
def outputFiles(self):
self.parseSettings()
output_settings = self.processInputFiles()
print('Found {0} files to process with the following settings:'.format(
len(self.files)))
settings = {
"indir": self.indir,
"outdir": self.outdir,
"image_type:": self.image_type,
"height:": self.height,
"width": self.width,
"depth": self.bit_depth
}
pp = pprint.PrettyPrinter(indent=4)
pp.pprint(settings)
# The following needs to happen in a separate thread from the main GUI thread.
# The task will be I/O bound and will freeze the main GUI unless
# execution happens in a separate QThread.
if output_settings:
self.thread = WorkerThread(task='GEN_DAT_FILES',
path=self.indir,
outpath=self.outdir,
files=self.files,
imht=self.height,
imwd=self.width,
bits=self.bytes_per_pixel,
byte=self.byte_order)
self.thread.done.connect(self.outputFinished)
print("Beginning File Output ...")
self.thread.start()
else:
print("Error Parsing Input Files ...")
return
"""
if output_settings:
for file in self.files:
# get input data from file
with open(os.path.join(self.indir, file), 'rb') as infile:
header = len(infile.read()) - self.bytes_per_pixel * self.width * self.height
infile.seek(0)
fmtstr = self.byte_order + 'u' + str(self.bytes_per_pixel)
# strip header information
data = np.fromstring(infile.read()[header:], fmtstr).reshape((self.height, self.width))
with open(os.path.join(self.outdir, file.split('.')[0]+'.dat'), 'wb') as outfile:
data.tofile(outfile)
print("Done outputting dat files ...")
self.close()
else:
print("Error Parsing Input Files ...")
return
"""
@QtCore.pyqtSlot()
def outputFinished(self):
print("Done Outputting .dat Files")
self.close()
class GenDatWindow(QtGui.QWidget):
"""
"""
def __init__(self, parent=None):
super(QtGui.QWidget, self).__init__(parent)
self.setWindowTitle("Enter Image Settings")
main_vbox = QtGui.QVBoxLayout()
indir_hbox = QtGui.QHBoxLayout()
self.indir_button = QtGui.QPushButton("Select Input Directory", self)
self.indir_textarea = QtGui.QLineEdit(self)
indir_hbox.addWidget(self.indir_button)
indir_hbox.addWidget(self.indir_textarea)
self.indir_button.clicked.connect(self.getInputDirectory)
main_vbox.addLayout(indir_hbox)
outdir_hbox = QtGui.QHBoxLayout()
self.outdir_button = QtGui.QPushButton("Select Output Directory", self)
self.outdir_textarea = QtGui.QLineEdit(self)
indir_hbox.addWidget(self.outdir_button)
indir_hbox.addWidget(self.outdir_textarea)
self.outdir_button.clicked.connect(self.getOutputDirectory)
main_vbox.addLayout(outdir_hbox)
image_type_hbox = QtGui.QHBoxLayout()
self.image_type_menu = QtGui.QComboBox(self)
self.image_type_menu.addItem("TIFF")
self.image_type_menu.addItem("PNG")
self.image_label = QtGui.QLabel("Select Input Image Type")
image_type_hbox.addWidget(self.image_type_menu)
image_type_hbox.addWidget(self.image_label)
main_vbox.addLayout(image_type_hbox)
main_vbox.addWidget(self.h_line())
# self.test_button = QtGui.QPushButton("Test ...", self)
# main_vbox.addWidget(self.test_button)
setting_hbox = QtGui.QHBoxLayout()
self.height_label = QtGui.QLabel("Enter Image Height (int)")
self.height_text = QtGui.QLineEdit(self)
setting_hbox.addWidget(self.height_label)
setting_hbox.addWidget(self.height_text)
self.width_label = QtGui.QLabel("Enter Image Width (int)")
self.width_text = QtGui.QLineEdit(self)
setting_hbox.addWidget(self.width_label)
setting_hbox.addWidget(self.width_text)
self.depth_label = QtGui.QLabel("Select Image Byte Depth")
self.depth_menu = QtGui.QComboBox(self)
self.depth_menu.addItem("8-bit")
self.depth_menu.addItem("16-bit")
setting_hbox.addWidget(self.depth_label)
setting_hbox.addWidget(self.depth_menu)
main_vbox.addLayout(setting_hbox)
main_vbox.addWidget(self.h_line())
button_box = QtGui.QHBoxLayout()
button_box.addStretch()
self.cancel_button = QtGui.QPushButton("Cancel", self)
self.cancel_button.clicked.connect(lambda: self.close())
self.output_button = QtGui.QPushButton("Output Files", self)
self.output_button.clicked.connect(self.outputFiles)
button_box.addWidget(self.cancel_button)
button_box.addWidget(self.output_button)
main_vbox.addLayout(button_box)
self.setLayout(main_vbox)
self.indir = None
self.outdir = None
self.height = None
self.width = None
print("Use Window to Enter file settings then click OutputFiles ...")
self.show()
def h_line(self):
f = QtGui.QFrame()
f.setFrameShape(QtGui.QFrame.HLine)
f.setFrameShadow(QtGui.QFrame.Sunken)
return f
def getInputDirectory(self):
self.indir = str(QtGui.QFileDialog.getExistingDirectory(parent=None,
caption="Select Directory Containing Input Files"))
if self.indir:
# not None
self.indir_textarea.setText(self.indir)
return
def getOutputDirectory(self):
self.outdir = str(QtGui.QFileDialog.getExistingDirectory(parent=None,
caption="Select Directory for Output Files"))
if self.outdir:
# not None
self.outdir_textarea.setText(self.outdir)
return
def parseSettings(self):
if not self.outdir:
print("Select an Output Directory.")
return
if not self.indir:
print("Select an Input Directory")
self.image_type = self.image_type_menu.currentText()
self.height = int(self.height_text.text())
if not self.height:
print("Enter a height.")
return
self.width = int(self.width_text.text())
if not self.width:
print("Enter a height.")
return
self.bit_depth = self.depth_menu.currentText()
def processInputFiles(self):
if self.image_type == "TIFF":
exts = [".tiff", ".TIFF", ".tif", ".TIF"]
elif self.image_type == "PNG":
exts = [".png", ".PNG"]
else:
print("Error: Unknown Image Type {}".format(self.image_type))
return False
self.files = []
for ext in exts:
for name in os.listdir(self.indir):
if name.endswith(ext):
self.files.append(name)
if not self.files:
print("Error: No Files found in directory {} with extensions {}".format(self.indir, exts))
return False
if self.image_type in ['.tif', '.tiff', '.TIF', '.TIFF']:
try:
print('Parsing file {0}'.format(os.path.join(self.indir, self.files[0])))
self.byte_order = LF.parse_tiff_header(os.path.join(self.indir, self.files[0]), self.widthw, self.heighth, self.bit_depth)
except LF.ParseError as e:
print("Failed to parse tiff header; defaulting to big endian bye order")
print(e.message)
print(e.errors)
byte_order = 'B' # default to big endian
else:
# PNG and JPEG always use Big Endian
self.byte_order = 'B' # default to big endian
# swap to numpy syntax
if self.byte_order == 'L':
self.byte_order = '<'
elif self.byte_order == 'B':
self.byte_order = '>'
if self.bit_depth == '16-bit':
self.bytes_per_pixel = 2
elif self.bit_depth == '8-bit':
self.bytes_per_pixel = 1
else:
print("Error: Unknown image bit_depth. Only 8bit and 16-bit images can be processed.")
return False
# All settings are ready to output files
return True
def outputFiles(self):
self.parseSettings()
output_settings = self.processInputFiles()
print('Found {0} files to process with the following settings:'.format(len(self.files)))
settings = {"indir": self.indir,
"outdir": self.outdir,
"image_type:": self.image_type,
"height:": self.height,
"width": self.width,
"depth": self.bit_depth}
pp = pprint.PrettyPrinter(indent=4)
pp.pprint(settings)
# The following needs to happen in a separate thread from the main GUI thread.
# The task will be I/O bound and will freeze the main GUI unless
# execution happens in a separate QThread.
if output_settings:
self.thread = WorkerThread(task='GEN_DAT_FILES',
path=self.indir,
outpath=self.outdir,
files=self.files,
imht=self.height,
imwd=self.width,
bits=self.bytes_per_pixel,
byte=self.byte_order
)
self.thread.done.connect(self.outputFinished)
print("Beginning File Output ...")
self.thread.start()
else:
print("Error Parsing Input Files ...")
return
"""
if output_settings:
for file in self.files:
# get input data from file
with open(os.path.join(self.indir, file), 'rb') as infile:
header = len(infile.read()) - self.bytes_per_pixel * self.width * self.height
infile.seek(0)
fmtstr = self.byte_order + 'u' + str(self.bytes_per_pixel)
# strip header information
data = np.fromstring(infile.read()[header:], fmtstr).reshape((self.height, self.width))
with open(os.path.join(self.outdir, file.split('.')[0]+'.dat'), 'wb') as outfile:
data.tofile(outfile)
print("Done outputting dat files ...")
self.close()
else:
print("Error Parsing Input Files ...")
return
"""
@QtCore.pyqtSlot()
def outputFinished(self):
print("Done Outputting .dat Files")
self.close()
