def getSchemaInfo(self, databaseName, dataTyping="ANY"):
"""Convenience method to return essential schema details for the input repository content type.
Args:
databaseName (str): schema name (e.g. pdbx, bird, chem_comp, ...)
dataTyping (str, optional): Application name for the target schema (e.g. ANY, SQL, ...)
Returns:
tuple: SchemaDefAccess(object), target database name, target collection name list, primary index attribute list
"""
sd = None
dbName = None
collectionNameList = []
docIndexD = {}
try:
mU = MarshalUtil(workPath=self.__workPath)
schemaLocator = self.__getSchemaDefLocator(databaseName,
dataTyping=dataTyping)
if self.__rebuildFlag:
filePath = os.path.join(
self.__schemaCachePath,
self.__fileU.getFileName(schemaLocator))
self.makeSchemaDef(databaseName,
dataTyping=dataTyping,
saveSchema=True)
else:
filePath = self.__reload(schemaLocator,
self.__schemaCachePath,
useCache=self.__useCache)
if not filePath:
logger.error("Unable to recover schema %s (%s)", databaseName,
dataTyping)
logger.debug("ContentType %r dataTyping %r schemaLocator %r",
databaseName, dataTyping, schemaLocator)
schemaDef = mU.doImport(filePath, fmt="json")
if schemaDef:
logger.debug(
"Using cached schema definition for %s application %s",
databaseName, dataTyping)
sd = SchemaDefAccess(schemaDef)
if sd:
dbName = sd.getDatabaseName()
collectionInfoList = sd.getCollectionInfo()
logger.debug("Schema %s database name %s collections %r",
databaseName, dbName, collectionInfoList)
for cd in collectionInfoList:
collectionName = cd["NAME"]
collectionNameList.append(collectionName)
docIndexD[collectionName] = sd.getDocumentIndices(
collectionName)
except Exception as e:
logger.exception("Retreiving schema %s for %s failing with %s",
databaseName, dataTyping, str(e))
return sd, dbName, collectionNameList, docIndexD
def __testAccessors(self, schemaDef):
""" Verify data and accessor mapping -
"""
sd = SchemaDefAccess(schemaDef)
logger.debug("Schema name %s", sd.getName())
logger.debug("Schema name %s", sd.getAppName())
logger.debug("Database name %s", sd.getDatabaseName())
logger.debug("Versioned database name %s",
sd.getVersionedDatabaseName())
logger.debug("Collection info %r", sd.getCollectionInfo())
for dS in sd.getDataSelectorNames():
logger.debug("Selector %s %r", dS, sd.getDataSelectors(dS))
collectionInfoL = sd.getCollectionInfo()
for dD in collectionInfoL:
collectionName = dD["NAME"]
logger.debug("Collection excluded %r",
sd.getCollectionExcluded(collectionName))
logger.debug("Collection included %r",
sd.getCollectionSelected(collectionName))
logger.debug("Collection document key attribute names %r",
sd.getDocumentKeyAttributeNames(collectionName))
schemaIdList = sd.getSchemaIdList()
for schemaId in schemaIdList:
#
aIdL = sd.getAttributeIdList(schemaId)
tObj = sd.getSchemaObject(schemaId)
attributeIdList = tObj.getAttributeIdList()
self.assertEqual(len(aIdL), len(attributeIdList))
attributeNameList = tObj.getAttributeNameList()
logger.debug("Ordered attribute Id list %s",
str(attributeIdList))
logger.debug("Ordered attribute name list %s",
str(attributeNameList))
#
mAL = tObj.getMapAttributeNameList()
logger.debug("Ordered mapped attribute name list %s", str(mAL))
mAL = tObj.getMapAttributeIdList()
logger.debug("Ordered mapped attribute id list %s", str(mAL))
cL = tObj.getMapInstanceCategoryList()
logger.debug("Mapped category list %s", str(cL))
for cV in cL:
aL = tObj.getMapInstanceAttributeList(cV)
logger.debug("Mapped attribute list in %s : %s", cV, str(aL))
return True
