def test_newstyle_graphviz_dot(self):
test_pipeline = Pipeline("test")
test_pipeline.check_if_uptodate (Up_to_date_task1, lambda : (False, ""))
test_pipeline.follows(Up_to_date_task2, Up_to_date_task1)\
.check_if_uptodate (lambda : (False, ""))\
.graphviz(URL='"http://cnn.com"', fillcolor = '"#FFCCCC"',
color = '"#FF0000"', pencolor='"#FF0000"', fontcolor='"#4B6000"',
label_suffix = "???", label_prefix = "What is this?<BR/> ",
label = "<What <FONT COLOR=\"red\">is</FONT>this>",
shape= "component", height = 1.5, peripheries = 5,
style="dashed")
test_pipeline.follows(Up_to_date_task3, Up_to_date_task2)\
.check_if_uptodate (lambda : (False, ""))
test_pipeline.follows(Up_to_date_final_target, Up_to_date_task3)\
.check_if_uptodate (lambda : (False, ""))
test_pipeline.follows(Explicitly_specified_task, Up_to_date_task1)\
.check_if_uptodate (lambda : (False, ""))
test_pipeline.follows(Task_to_run1, Explicitly_specified_task)
test_pipeline.follows(Task_to_run2, Task_to_run1)
test_pipeline.follows(Task_to_run3, Task_to_run2)
test_pipeline.follows(Up_to_date_task_forced_to_rerun, Task_to_run2)\
.check_if_uptodate (lambda : (False, ""))
test_pipeline.follows(Final_target, Up_to_date_task_forced_to_rerun, Task_to_run3)
test_pipeline.follows(Downstream_task1_ignored, Final_target)
test_pipeline.follows(Downstream_task2_ignored, Final_target)
if sys.hexversion >= 0x03000000:
# everything is unicode in python3
s = BytesIO()
else:
s = StringIO()
test_pipeline.printout_graph (
s,
# use flowchart file name extension to decide flowchart format
# e.g. svg, jpg etc.
"dot",
[Final_target, Up_to_date_final_target])
self.assertTrue('[URL="http://cnn.com", color="#FF0000", fillcolor="#FFCCCC", fontcolor="#4B6000", height=1.5, label=<What is this?<BR/> What <FONT COLOR="red">is</FONT>this???>, pencolor="#FF0000", peripheries=5, shape=component, style=dashed]' in s.getvalue().decode())
def test_newstyle_ruffus(self):
print(" Run pipeline normally...")
test_pipeline = Pipeline("test")
test_pipeline.originate(make_start, [tempdir + 'start'])
test_pipeline.split(split_start, make_start, tempdir + '*.split')
test_pipeline.subdivide(subdivide_start, split_start, formatter(),
tempdir + '{basename[0]}_*.subdivided',
tempdir + '{basename[0]}')
if self.graph_viz_present:
test_pipeline.printout_graph(tempdir + "flowchart.dot")
test_pipeline.printout_graph(tempdir + "flowchart.jpg",
target_tasks=[subdivide_start],
forcedtorun_tasks=[split_start],
no_key_legend=True)
test_pipeline.printout_graph(tempdir + "flowchart.svg",
no_key_legend=False)
# Unknown format
try:
test_pipeline.printout_graph(tempdir + "flowchart.unknown",
no_key_legend=False)
raise Exception(
"Failed to throw exception for test_pipeline.printout_graph unknown extension "
)
except CalledProcessError as err:
pass
test_pipeline.printout_graph(tempdir + "flowchart.unknown",
"svg",
no_key_legend=False)
else:
test_pipeline.printout_graph(tempdir + "flowchart.dot",
target_tasks=[subdivide_start],
forcedtorun_tasks=[split_start],
no_key_legend=True)
def test_newstyle_ruffus (self):
print(" Run pipeline normally...")
test_pipeline = Pipeline("test")
test_pipeline.originate(make_start, [tempdir + 'start'])
test_pipeline.split(split_start, make_start, tempdir + '*.split')
test_pipeline.subdivide(subdivide_start, split_start, formatter(), tempdir + '{basename[0]}_*.subdivided', tempdir + '{basename[0]}')
if self.graph_viz_present:
test_pipeline.printout_graph(tempdir + "flowchart.dot")
test_pipeline.printout_graph(tempdir + "flowchart.jpg",
target_tasks =[subdivide_start],
forcedtorun_tasks = [split_start],
no_key_legend = True)
test_pipeline.printout_graph(tempdir + "flowchart.svg", no_key_legend = False)
# Unknown format
try:
test_pipeline.printout_graph(tempdir + "flowchart.unknown", no_key_legend = False)
raise Exception("Failed to throw exception for test_pipeline.printout_graph unknown extension ")
except CalledProcessError as err:
pass
test_pipeline.printout_graph(tempdir + "flowchart.unknown", "svg", no_key_legend = False)
else:
test_pipeline.printout_graph(tempdir + "flowchart.dot",
target_tasks =[subdivide_start],
forcedtorun_tasks = [split_start],
no_key_legend = True)