def runTest(self):
UseCompatibilityMode()
LOQ()
Detector("main-detector-bank")
csv_file = FileFinder.getFullPath('batch_input.csv')
Set1D()
MaskFile('MASK.094AA')
Gravity(True)
BatchReduce(csv_file,
'raw',
plotresults=False,
saveAlgs={
'SaveCanSAS1D': 'xml',
'SaveNexus': 'nxs'
})
LoadNexus(Filename='54433sans.nxs', OutputWorkspace='result')
Plus(LHSWorkspace='result',
RHSWorkspace='99630sanotrans',
OutputWorkspace='result')
os.remove(
os.path.join(config['defaultsave.directory'], '54433sans.nxs'))
os.remove(
os.path.join(config['defaultsave.directory'],
'99630sanotrans.nxs'))
os.remove(
os.path.join(config['defaultsave.directory'], '54433sans.xml'))
os.remove(
os.path.join(config['defaultsave.directory'],
'99630sanotrans.xml'))
def runTest(self):
ZOOM()
MaskFile(
"USER_ZOOM_SANSteam_4m_SampleChanger_202A_12mm_Large_BEAMSTOP.txt")
AssignSample("ZOOM9898")
TransmissionSample("ZOOM9947_histo", "ZOOM9947_histo")
WavRangeReduction()
def runTest(self):
UseCompatibilityMode()
SANS2DTUBES()
MaskFile('USER_SANS2D_143ZC_2p4_4m_M4_Knowles_12mm.txt')
SetDetectorOffsets('REAR', -16.0, 58.0, 0.0, 0.0, 0.0, 0.0)
SetDetectorOffsets('FRONT', -44.0, -20.0, 47.0, 0.0, 1.0, 1.0)
Gravity(False)
Set1D()
# add files (SAMPLE and CAN)
time_shifts = [1]
SANSadd2.add_runs(('28827', '28797'),
'SANS2DTUBES',
'.nxs',
rawTypes=('.add', '.raw', '.s*'),
lowMem=False,
saveAsEvent=True,
isOverlay=True,
time_shifts=time_shifts)
SANSadd2.add_runs(('28823', '28793'),
'SANS2DTUBES',
'.nxs',
rawTypes=('.add', '.raw', '.s*'),
lowMem=False,
saveAsEvent=True,
isOverlay=True,
time_shifts=time_shifts)
AssignSample(r'SANS2D00028797-add.nxs', reload=True)
AssignCan(r'SANS2D00028793-add.nxs', reload=True)
TransmissionSample(r'SANS2D00028808.nxs', r'SANS2D00028784.nxs')
TransmissionCan(r'SANS2D00028823.nxs', r'SANS2D00028784.nxs')
WavRangeReduction()
def runTest(self):
UseCompatibilityMode()
LARMOR()
Set1D()
Detector("DetectorBench")
MaskFile(
'USER_LARMOR_151B_LarmorTeam_80tubes_BenchRot1p4_M4_r3699.txt')
Gravity(True)
AddRuns(('13065', '13065'), 'LARMOR', 'nxs', lowMem=True)
AssignSample('13065-add.nxs')
WavRangeReduction(2, 4, DefaultTrans)
# Clean up
for element in AnalysisDataService.getObjectNames():
if AnalysisDataService.doesExist(
element) and element != "13065p1rear_1D_2.0_4.0":
AnalysisDataService.remove(element)
paths = [
os.path.join(config['defaultsave.directory'],
'LARMOR00013065-add.nxs'),
os.path.join(config['defaultsave.directory'], 'SANS2D00013065.log')
] # noqa
for path in paths:
if os.path.exists(path):
os.remove(path)
def runTest(self):
UseCompatibilityMode()
SANS2D()
MaskFile('MaskSANS2DReductionGUI.txt')
BatchReduce('sans2d_reduction_gui_batch.csv',
'.nxs',
combineDet='rear')
def runTest(self):
UseCompatibilityMode()
config['default.instrument'] = 'SANS2D'
SANS2DTUBES()
Set1D()
Detector("rear-detector")
# This contains two MASKFILE commands, each resulting in a separate call to MaskDetectors.
MaskFile('SANS2DTube_ZerroErrorFreeTest.txt')
# Saves a file which produces an output file which does not contain any zero errors
csv_file = FileFinder.getFullPath(
"SANS2DTUBES_ZeroErrorFree_batch.csv")
save_alg = {"SaveNexus": "nxs"}
BatchReduce(csv_file,
'nxs',
saveAlgs=save_alg,
plotresults=False,
save_as_zero_error_free=True)
DeleteWorkspace('zero_free_out_rear_1D_1.75_12.5')
# The zero correction only occurs for the saved files. Stephen King mentioned that the
# original workspaces should not be tampered with
self._final_output = os.path.join(
config['defaultsave.directory'],
'zero_free_out_rear_1D_1.75_12.5.nxs')
self._final_workspace = 'ws'
Load(Filename=self._final_output,
OutputWorkspace=self._final_workspace)
def runTest(self):
UseCompatibilityMode()
ZOOM()
MaskFile("16812_Userfile.toml")
Set1D()
AssignSample('16182')
WavRangeReduction()
def test_mask_file_handles_non_existent_user_files(self):
tmp_dir = tempfile.gettempdir()
non_existent_file = str(uuid.uuid1())
file_not_there = os.path.join(tmp_dir, non_existent_file)
self.assertFalse(os.path.exists(file_not_there))
with self.assertRaises(FileNotFoundError):
MaskFile(file_not_there)
def runTest(self):
UseCompatibilityMode()
SANS2D()
MaskFile('MaskSANS2DReductionGUI.txt')
SetEventSlices("0.0-451, 5-10")
batch_file = FileFinder.getFullPath('sans2d_reduction_gui_batch.csv')
BatchReduce(batch_file, '.nxs', saveAlgs={}, combineDet='rear')
def runTest(self):
UseCompatibilityMode()
SANS2D()
Set2D()
MaskFile("USER_SANS2D_212A_2p4_4m_M4_Sans2d_Team_8mm_Changer_After_GuideRealignment.toml")
AssignSample("SANS2D00068982.nxs")
TransmissionSample("SANS2D00068976.nxs", "SANS2D00069299.nxs")
self.returned = WavRangeReduction()
def runTest(self):
UseCompatibilityMode()
LOQ()
MaskFile('MaskLOQData.txt')
BatchReduce('loq_batch_mode_reduction.csv',
'.nxs',
combineDet='merged',
saveAlgs={})
def runTest(self):
UseCompatibilityMode()
ZOOM()
MaskFile(
"USER_ZOOM_SANSteam_4m_SampleChanger_202A_12mm_Large_BEAMSTOP.txt")
Set1D()
AssignSample('16182')
WavRangeReduction()
def test_mask_file_for_existing_file(self):
tmp_file = tempfile.NamedTemporaryFile(mode='r')
file_name = os.path.basename(tmp_file.name)
with mock.patch(
'sans.command_interface.ISISCommandInterface.find_full_file_path'
) as mocked_finder:
mocked_finder.return_value = tmp_file.name
self.assertIsNone(MaskFile(file_name))
def runTest(self):
"""
Loads data using raw event transmission data
"""
ZOOM()
MaskFile(
"USER_ZOOM_SANSteam_4m_SampleChanger_202A_12mm_Large_BEAMSTOP.txt")
AssignSample("ZOOM9898")
TransmissionSample("ZOOM9946", "ZOOM9946")
WavRangeReduction()
def runTest(self):
UseCompatibilityMode()
SANS2D()
MaskFile('MaskSANS2DReductionGUI.txt')
AssignSample('22048')
AssignCan('22023')
TransmissionSample('22041', '22024')
TransmissionCan('22024', '22024')
reduced = WavRangeReduction()
RenameWorkspace(reduced, OutputWorkspace='trans_test_rear')
def runTest(self):
UseCompatibilityMode()
SANS2D()
Set1D()
Detector("rear-detector")
MaskFile('Mask_SANS2D_091_options.toml')
Gravity(True)
AssignSample('5512')
self.reduced = WavRangeReduction()
def runTest(self):
UseCompatibilityMode()
SANS2D()
Set1D()
Detector("rear-detector")
MaskFile('MASKSANS2Doptions.091A')
Gravity(True)
csv_file = FileFinder.getFullPath('SANS2D_periodTests.csv')
BatchReduce(csv_file, 'nxs', plotresults=False, saveAlgs={'SaveCanSAS1D': 'xml', 'SaveNexus': 'nxs'})
os.remove(os.path.join(config['defaultsave.directory'], '5512p7_SANS2DBatch_p7rear_1D_2.0_14.0Phi-45.0_45.0.xml'))
def runTest(self):
pass
UseCompatibilityMode()
SANS2D()
Set1D()
Detector("rear-detector")
MaskFile('MASKSANS2Doptions.091A')
Gravity(True)
AssignSample('5512')
self.reduced = WavRangeReduction()
def runTest(self):
UseCompatibilityMode()
SANS2D()
MaskFile(MASKFILE)
AssignSample('22048')
AssignCan('22023')
TransmissionSample('22041', '22024')
TransmissionCan('22024', '22024')
SetEventSlices("0.0-450, 5-10")
reduced = WavRangeReduction()
RenameWorkspace(reduced, OutputWorkspace='trans_test_rear')
def runTest(self):
UseCompatibilityMode()
SANS2D()
Set1D()
Detector("rear-detector")
MaskFile('MASKSANS2Doptions.091A')
Gravity(True)
csv_file = FileFinder.getFullPath('SANS2D_multiPeriodTests.csv')
BatchReduce(csv_file, 'nxs', saveAlgs={})
self.reduced = '5512_SANS2DBatch_rear_1DPhi-45.0_45.0'
def runTest(self):
UseCompatibilityMode()
SANS2D()
MaskFile('MaskSANS2DReductionGUI.txt')
AssignSample('22048')
AssignCan('22023')
TransmissionSample('22041', '22024')
TransmissionCan('22024', '22024')
centre = FindBeamCentre(rlow=41.0, rupp=280.0, xstart=float(150)/1000., ystart=float(-160)/1000.,
tolerance=0.0001251, MaxIter=3, reduction_method=True)
self.assertDelta(centre['pos2'], -0.145, 0.0001)
self.assertDelta(centre['pos1'], 0.15, 0.0001)
def runTest(self):
UseCompatibilityMode()
SANS2D()
MaskFile('MASKSANS2D.091A')
Gravity(True)
Set1D()
AssignSample('992.raw')
TransmissionSample('988.raw', '987.raw')
AssignCan('993.raw')
TransmissionCan('989.raw', '987.raw')
CompWavRanges([3, 5, 7, 11], False)
def runTest(self):
UseCompatibilityMode()
SANS2D()
MaskFile('MASKSANS2D_094i_RKH.txt')
SetDetectorOffsets('REAR', -16.0, 58.0, 0.0, 0.0, 0.0, 0.0)
SetDetectorOffsets('FRONT', -44.0, -20.0, 47.0, 0.0, 1.0, 1.0)
extraLength = 1
Gravity(True, extraLength)
Set1D()
AssignSample('2500.nxs')
WavRangeReduction(4.6, 12.85, False)
def runTest(self):
UseCompatibilityMode()
LOQ()
Set2D()
Detector("main-detector-bank")
MaskFile('MASK_094AA.toml')
# apply some small artificial shift
SetDetectorOffsets('REAR', -1.0, 1.0, 0.0, 0.0, 0.0, 0.0)
Gravity(True)
AssignSample('99630.RAW') # They file seems to be named wrongly.
AssignCan('99631.RAW') # The file seems to be named wrongly.
WavRangeReduction(None, None, False)
def runTest(self):
LARMOR()
Set1D()
Detector("DetectorBench")
MaskFile('USER_Larmor_163F_HePATest_r13038.txt')
AssignSample('13038')
# Different in V2. We need to call the reduction in order to load the data. Hence we add the
# WaveRangeReduction here.
WavRangeReduction()
base_name = "13038_sans_nxs_"
number_of_workspaces = 4
self._check_if_all_multi_period_workspaces_have_the_same_position(
base_name, number_of_workspaces)
self._clean_up(base_name, number_of_workspaces)
def runTest(self):
UseCompatibilityMode()
LOQ()
Set1D()
Detector("rear-detector")
MaskFile('MASK.094AA')
Gravity(False)
SetCentre(324.765, 327.670)
AssignSample('54431.raw')
TransmissionSample('54435.raw', '54433.raw')
AssignCan('54432.raw')
TransmissionCan('54434.raw', '54433.raw')
WavRangeReduction(3, 9, DefaultTrans)
def runTest(self):
UseCompatibilityMode()
SANS2D()
Set1D()
Detector("rear-detector")
MaskFile('MASKSANS2Doptions.091A')
Gravity(True)
AddRuns(('5512', '5512'), 'SANS2D', 'nxs', lowMem=True)
# one period of a multi-period Nexus file
AssignSample('5512-add.nxs', period=7)
WavRangeReduction(2, 4, DefaultTrans)
paths = [os.path.join(config['defaultsave.directory'], 'SANS2D00005512-add.nxs'),
os.path.join(config['defaultsave.directory'], 'SANS2D00005512.log')]
for path in paths:
if os.path.exists(path):
os.remove(path)
def runTest(self):
UseCompatibilityMode()
config['default.instrument'] = 'SANS2D'
SANS2D()
Set1D()
Detector("rear-detector")
# This contains two MASKFILE commands, each resulting in a separate call to MaskDetectors.
MaskFile('MaskSANS2DReductionGUI_MaskFiles.txt')
Gravity(True)
# This does 2 separate reductions of the same data, but saving the result of each to a different workspace.
csv_file = FileFinder.getFullPath("SANS2D_mask_batch.csv")
BatchReduce(csv_file, 'nxs', plotresults=False)
path1 = os.path.join(config['defaultsave.directory'], 'iteration_1.xml')
path2 = os.path.join(config['defaultsave.directory'], 'iteration_2.xml')
if os.path.exists(path1):
os.remove(path1)
if os.path.exists(path2):
os.remove(path2)
def runTest(self):
# Select instrument and user file
UseCompatibilityMode()
SANS2DTUBES()
MaskFile(file_name='USER_SANS2D_143ZC_2p4_4m_M4_Knowles_12mm.txt')
# Setup detector positions
SetDetectorOffsets(bank='REAR',
x=-16.0,
y=58.0,
z=0.0,
rot=0.0,
radius=0.0,
side=0.0)
SetDetectorOffsets(bank='FRONT',
x=-44.0,
y=-20.0,
z=47.0,
rot=0.0,
radius=1.0,
side=1.0)
Gravity(False)
# Set the front detector fitting
SetFrontDetRescaleShift(scale=1.0,
shift=0.0,
fitScale=True,
fitShift=True)
Set1D()
# Assign data
AssignSample(r'SANS2D00028797.nxs', reload=True)
AssignCan(r'SANS2D00028793.nxs', reload=True)
TransmissionSample(r'SANS2D00028808.nxs', r'SANS2D00028784.nxs')
TransmissionCan(r'SANS2D00028823.nxs', r'SANS2D00028784.nxs')
# Run the reduction and request FRONT and BACK to be merged
WavRangeReduction(combineDet="merged")
def runTest(self):
UseCompatibilityMode()
LOQ()
MaskFile(MASKFILE)
BatchReduce(BATCHFILE, '.nxs', combineDet='merged', saveAlgs={})
