def get_context_data(self, **kwargs):
kwargs = HasWorkingModel.get_context_data(self, **kwargs)
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['list_of_submodels'] = self.listOfSubmodels
kwargs['list_of_submodels_names'] = [
submodel.getNameOrSbmlId() for submodel in self.listOfSubmodels
]
kwargs['list_of_substitutions'] = self.listOfSubstitutions
kwargs['list_of_project_models'] = [
str(pm.name) for pm in self.listOfProjectModels
]
kwargs['list_of_submodels_refs'] = self.listOfSubmodelsRefs
kwargs['list_of_submodel_types'] = self.listOfSubmodelTypes
kwargs['submodel_types'] = [
"Internal model definition", "External model definition"
]
kwargs['list_of_objects'] = self.listOfObjects
kwargs['list_of_conversion_factors'] = [
conv_factor.getNameOrSbmlId()
for conv_factor in self.listOfConversionFactors
]
kwargs['form'] = self.form
kwargs['form_subs'] = self.formSubstitutions
return kwargs
def get_context_data(self, **kwargs): kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['computations'] = self.computations kwargs['comp_statuses'] = self.computationsStatus kwargs['conts'] = self.conts kwargs['optims'] = self.optims return kwargs
def get_context_data(self, **kwargs): kwargs = HasWorkingModel.get_context_data(self, **kwargs) kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['list_of_constants'] = [const.getNameOrSbmlId() for const in self.listOfConstants] kwargs['list_of_variables'] = [var.getNameOrSbmlId() for var in self.listOfVariables] kwargs['list_of_computations'] = self.listOfComputations return kwargs
def get_context_data(self, **kwargs):
kwargs = HasWorkingProject.get_context_data(self, **kwargs)
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['plots_2d'] = self.listOfPlots2D
kwargs['colors'] = Settings.default_colors
return kwargs
def get_context_data(self, **kwargs): kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs = HasWorkingModel.get_context_data(self, **kwargs) kwargs['list_of_events'] = self.listOfEvents kwargs['list_of_variables'] = [var.getNameOrSbmlId() for var in self.listOfVariables] kwargs['form'] = self.form return kwargs
def get_context_data(self, **kwargs): kwargs = HasWorkingModel.get_context_data(self, **kwargs) kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['list_of_compartments'] = self.listOfCompartments kwargs['list_of_units'] = [unit.getName() for unit in self.listOfUnits] kwargs['form'] = self.form return kwargs
def get_context_data(self, **kwargs):
kwargs = HasWorkingModel.get_context_data(self, **kwargs)
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['list_of_compartments'] = self.listOfCompartments
kwargs['list_of_units'] = [unit.getName() for unit in self.listOfUnits]
kwargs['form'] = self.form
return kwargs
def get_context_data(self, **kwargs): kwargs = HasWorkingProject.get_context_data(self, **kwargs) kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['plots_2d'] = self.listOfPlots2D kwargs['colors'] = Settings.default_colors return kwargs
def get_context_data(self, **kwargs): kwargs = HasWorkingProject.get_context_data(self, **kwargs) kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['form'] = self.fileUploadForm kwargs['sbml_models'] = self.listOfModels return kwargs
def get_context_data(self, **kwargs):
kwargs = HasWorkingProject.get_context_data(self, **kwargs)
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['form'] = self.fileUploadForm
kwargs['sbml_models'] = self.listOfModels
return kwargs
def get_context_data(self, **kwargs):
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs = HasWorkingModel.get_context_data(self, **kwargs)
kwargs['list_of_events'] = self.listOfEvents
kwargs['list_of_variables'] = [
var.getNameOrSbmlId() for var in self.listOfVariables
]
kwargs['form'] = self.form
return kwargs
def get_context_data(self, **kwargs): kwargs = HasWorkingModel.get_context_data(self, **kwargs) kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['list_of_constants'] = [const.getNameOrSbmlId() for const in self.listOfConstants] kwargs['list_of_computations'] = self.listOfComputations kwargs['colors'] = Settings.default_colors kwargs['form'] = self.form return kwargs
def get_context_data(self, **kwargs): kwargs = HasWorkingModel.get_context_data(self, **kwargs) kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['list_of_parameters'] = self.listOfParameters kwargs['list_of_reactions'] = ["Global"] + [reaction.getNameOrSbmlId() for reaction in self.listOfReactions] kwargs['list_of_units'] = [unit.getNameOrSbmlId() for unit in self.listOfUnits] kwargs['form'] = self.form return kwargs
def get_context_data(self, **kwargs):
kwargs = HasWorkingModel.get_context_data(self, **kwargs)
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['page_address'] = reverse('edit_annotations')
kwargs['model_history'] = self.modelHistory
kwargs['model_publication'] = self.modelPublication
kwargs['form'] = self.form
return kwargs
def get_context_data(self, **kwargs):
kwargs = HasWorkingModel.get_context_data(self, **kwargs)
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['page_address'] = reverse('edit_annotations')
kwargs['model_history'] = self.modelHistory
kwargs['model_publication'] = self.modelPublication
kwargs['form'] = self.form
return kwargs
def get_context_data(self, **kwargs):
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['mail_address'] = self.mailAddress
kwargs['mail_use_tls'] = self.mailUseTLS
kwargs['mail_host'] = self.mailHost
kwargs['mail_port'] = self.mailPort
kwargs['mail_user'] = self.mailUser
kwargs['mail_active'] = (self.mailAddress != None
and self.mailHost != None
and self.mailPort != None
and self.mailUser != None)
return kwargs
def get_context_data(self, **kwargs): kwargs = HasWorkingModel.get_context_data(self, **kwargs) kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['list_of_species'] = self.listOfSpecies kwargs['list_of_compartments'] = [comp.getNameOrSbmlId() for comp in self.listOfCompartments] kwargs['list_of_species_type'] = ["Amount", "Concentration"] kwargs['list_of_units'] = [unit.getName() for unit in self.listOfUnits] kwargs['form'] = self.form return kwargs
def get_context_data(self, **kwargs): kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['mail_address'] = self.mailAddress kwargs['mail_use_tls'] = self.mailUseTLS kwargs['mail_host'] = self.mailHost kwargs['mail_port'] = self.mailPort kwargs['mail_user'] = self.mailUser kwargs['mail_active'] = ( self.mailAddress != None and self.mailHost != None and self.mailPort!= None and self.mailUser != None ) return kwargs
def get_context_data(self, **kwargs): kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs = HasWorkingModel.get_context_data(self, **kwargs) kwargs['list_of_reactions'] = self.listOfReactions kwargs['list_of_kinetic_laws'] = self.listOfKineticLaws kwargs['list_of_species'] = [species.getNameOrSbmlId() for species in self.listOfSpecies] kwargs['list_of_parameters'] = [parameter.getNameOrSbmlId() for parameter in self.listOfParameters] kwargs['reaction_types'] = self.reactionTypes kwargs['parameters_list'] = self.parametersList kwargs['allow_reversible'] = self.allowReversibleList kwargs['form'] = self.form return kwargs
def get_context_data(self, **kwargs): kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs = HasWorkingModel.get_context_data(self, **kwargs) kwargs['list_of_reactions'] = self.listOfReactions kwargs['list_of_kinetic_laws'] = self.listOfKineticLaws kwargs['list_of_species'] = [species.getNameOrSbmlId() for species in self.listOfSpecies] kwargs['list_of_parameters'] = [parameter.getNameOrSbmlId() for parameter in self.listOfParameters] kwargs['reaction_types'] = self.reactionTypes kwargs['parameters_list'] = self.parametersList kwargs['allow_reversible'] = self.allowReversibleList kwargs['form'] = self.form return kwargs
def get_context_data(self, **kwargs):
kwargs = HasWorkingModel.get_context_data(self, **kwargs)
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['page_address'] = reverse('edit_overview')
kwargs['list_of_units'] = [unit.getName() for unit in self.listOfUnits]
kwargs['list_of_parameters'] = [
parameter.getNameOrSbmlId() for parameter in self.listOfParameters
]
kwargs['sbml_levels'] = self.sbmlLevels
kwargs['model_history'] = self.modelHistory
kwargs['model_publication'] = self.modelPublication
kwargs['form'] = self.form
return kwargs
def get_context_data(self, **kwargs):
kwargs = HasWorkingModel.get_context_data(self, **kwargs)
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['page_address'] = reverse('edit_overview')
kwargs['list_of_units'] = [unit.getName() for unit in self.listOfUnits]
kwargs['list_of_parameters'] = [parameter.getNameOrSbmlId() for parameter in self.listOfParameters]
kwargs['sbml_levels'] = self.sbmlLevels
kwargs['model_history'] = self.modelHistory
kwargs['model_publication'] = self.modelPublication
kwargs['form'] = self.form
return kwargs
def get_context_data(self, **kwargs): kwargs = HasWorkingModel.get_context_data(self, **kwargs) kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['list_of_submodels'] = self.listOfSubmodels kwargs['list_of_submodels_names'] = [submodel.getNameOrSbmlId() for submodel in self.listOfSubmodels] kwargs['list_of_substitutions'] = self.listOfSubstitutions kwargs['list_of_project_models'] = [str(pm.name) for pm in self.listOfProjectModels] kwargs['list_of_submodels_refs'] = self.listOfSubmodelsRefs kwargs['list_of_submodel_types'] = self.listOfSubmodelTypes kwargs['submodel_types'] = ["Internal model definition", "External model definition"] kwargs['list_of_objects'] = self.listOfObjects kwargs['list_of_conversion_factors'] = [conv_factor.getNameOrSbmlId() for conv_factor in self.listOfConversionFactors] kwargs['form'] = self.form kwargs['form_subs'] = self.formSubstitutions return kwargs
def get_context_data(self, **kwargs): kwargs = HasErrorMessages.get_context_data(self.form, **kwargs) kwargs['form'] = self.form return kwargs
def get_context_data(self, **kwargs):
kwargs = HasErrorMessages.get_context_data(self, **kwargs)
kwargs['users'] = self.users
return kwargs
def get_context_data(self, **kwargs): kwargs = HasErrorMessages.get_context_data(self, **kwargs) kwargs['users'] = self.users return kwargs
def get_context_data(self, **kwargs):
kwargs = HasErrorMessages.get_context_data(self.form, **kwargs)
kwargs['form'] = self.form
return kwargs
def get_context_data(self, **kwargs): kwargs = HasErrorMessages.get_context_data(self, **kwargs) return kwargs