def handle(self, sock):
try:
connection = Connection(sock, self.savedata, "",
self.savedataFolder, "dataset")
# First message is the config (file or text)
config = next(connection)
# Break out if a connection was established but no data was received
if ((config is None) & (connection.is_exhausted is True)):
logging.info("Connection closed without any data received")
return
# Second messages is the metadata (text)
metadata = next(connection)
# Decide what program to use based on config
# As a shortcut, we accept the file name as text too.
if (config == "simplefft"):
logging.info("Starting simplefft processing based on config")
simplefft.process(connection, config, metadata)
elif (config == "invertcontrast"):
logging.info(
"Starting invertcontrast processing based on config")
invertcontrast.process(connection, config, metadata)
elif (config == "null"):
logging.info("No processing based on config")
try:
for msg in connection:
if msg is None:
break
finally:
connection.send_close()
elif (config == "savedataonly"):
logging.info("Save data, but no processing based on config")
if connection.savedata is True:
logging.debug("Saving data is already enabled")
else:
connection.savedata = True
connection.create_save_file()
# Dummy loop with no processing
try:
for msg in connection:
if msg is None:
break
finally:
connection.send_close()
else:
logging.info(
"Unknown config '%s'. Falling back to 'invertcontrast'",
config)
invertcontrast.process(connection, config, metadata)
except Exception as e:
logging.exception(e)
finally:
# Encapsulate shutdown in a try block because the socket may have
# already been closed on the other side
try:
sock.shutdown(socket.SHUT_RDWR)
except:
pass
sock.close()
logging.info("Socket closed")
def handle(self, sock):
try:
connection = Connection(sock, self.savedata, "",
self.savedataFolder, "dataset")
# First message is the config (file or text)
config = next(connection)
# Break out if a connection was established but no data was received
if ((config is None) & (connection.is_exhausted is True)):
logging.info("Connection closed without any data received")
return
# Second messages is the metadata (text)
metadata_xml = next(connection)
logging.debug("XML Metadata: %s", metadata_xml)
try:
metadata = ismrmrd.xsd.CreateFromDocument(metadata_xml)
if (metadata.acquisitionSystemInformation.systemFieldStrength_T
!= None):
logging.info(
"Data is from a %s %s at %1.1fT",
metadata.acquisitionSystemInformation.systemVendor,
metadata.acquisitionSystemInformation.systemModel,
metadata.acquisitionSystemInformation.
systemFieldStrength_T)
except:
logging.warning(
"Metadata is not a valid MRD XML structure. Passing on metadata as text"
)
metadata = metadata_xml
# Decide what program to use based on config
# If not one of these explicit cases, try to load file matching name of config
if (config == "simplefft"):
logging.info("Starting simplefft processing based on config")
simplefft.process(connection, config, metadata)
elif (config == "invertcontrast"):
logging.info(
"Starting invertcontrast processing based on config")
invertcontrast.process(connection, config, metadata)
elif (config == "analyzeflow"):
logging.info("Starting analyzeflow processing based on config")
analyzeflow.process(connection, config, metadata)
elif (config == "null"):
logging.info("No processing based on config")
try:
for msg in connection:
if msg is None:
break
finally:
connection.send_close()
elif (config == "savedataonly"):
# Dummy loop with no processing
try:
for msg in connection:
if msg is None:
break
finally:
connection.send_close()
else:
try:
# Load module from file having exact name as config
module = importlib.import_module(config)
logging.info("Starting config %s", config)
module.process(connection, config, metadata)
except ImportError:
logging.info(
"Unknown config '%s'. Falling back to 'invertcontrast'",
config)
invertcontrast.process(connection, config, metadata)
except Exception as e:
logging.exception(e)
finally:
# Encapsulate shutdown in a try block because the socket may have
# already been closed on the other side
try:
sock.shutdown(socket.SHUT_RDWR)
except:
pass
sock.close()
logging.info("Socket closed")
# Dataset may not be closed properly if a close message is not received
if connection.savedata is True:
try:
connection.dset.close()
except:
pass
logging.info("Incoming data was saved at %s",
connection.mrdFilePath)
def handle(self, sock):
try:
connection = Connection(sock, self.savedata, "",
self.savedataFolder, "dataset")
# First message is the config (file or text)
config = next(connection)
# Break out if a connection was established but no data was received
if ((config is None) & (connection.is_exhausted is True)):
logging.info("Connection closed without any data received")
return
# Second messages is the metadata (text)
metadata_xml = next(connection)
logging.debug("XML Metadata: %s", metadata_xml)
try:
metadata = ismrmrd.xsd.CreateFromDocument(metadata_xml)
if (metadata.acquisitionSystemInformation.systemFieldStrength_T
!= None):
logging.info(
"Data is from a %s %s at %1.1fT",
metadata.acquisitionSystemInformation.systemVendor,
metadata.acquisitionSystemInformation.systemModel,
metadata.acquisitionSystemInformation.
systemFieldStrength_T)
except:
logging.warning(
"Metadata is not a valid MRD XML structure. Passing on metadata as text"
)
metadata = metadata_xml
# Decide what program to use based on config
# As a shortcut, we accept the file name as text too.
if (config == "simplefft"):
logging.info("Starting simplefft processing based on config")
simplefft.process(connection, config, metadata)
elif (config == "invertcontrast"):
logging.info(
"Starting invertcontrast processing based on config")
invertcontrast.process(connection, config, metadata)
elif (config == "null"):
logging.info("No processing based on config")
try:
for msg in connection:
if msg is None:
break
finally:
connection.send_close()
elif (config == "savedataonly"):
logging.info("Save data, but no processing based on config")
if connection.savedata is True:
logging.debug("Saving data is already enabled")
else:
connection.savedata = True
connection.create_save_file()
# Dummy loop with no processing
try:
for msg in connection:
if msg is None:
break
finally:
connection.send_close()
else:
logging.info(
"Unknown config '%s'. Falling back to 'invertcontrast'",
config)
invertcontrast.process(connection, config, metadata)
except Exception as e:
logging.exception(e)
finally:
# Encapsulate shutdown in a try block because the socket may have
# already been closed on the other side
try:
sock.shutdown(socket.SHUT_RDWR)
except:
pass
sock.close()
logging.info("Socket closed")