Python SequenceIterator.validate_ids Beispiele

Beispiel #1

Datei: test_iterator.py Projekt: kschwarzberg/scikit-bio

    def test_validate_ids_false(self):
        wk = SequenceIterator(['aattgg'], valid_id=False)

        wk.state = self.seq_ok.copy()
        wk.validate_ids()
        self.assertFalse(wk.failed)

        wk.state = self.seqqual_ok.copy()
        wk.validate_ids()
        self.assertFalse(wk.failed)

        wk.state = self.seqqual_bad_id.copy()
        wk.validate_ids()
        self.assertFalse(wk.failed)

Beispiel #2

    def test_validate_ids_false(self):
        wk = SequenceIterator(['aattgg'], valid_id=False)

        wk.state = self.seq_ok.copy()
        wk.validate_ids()
        self.assertFalse(wk.failed)

        wk.state = self.seqqual_ok.copy()
        wk.validate_ids()
        self.assertFalse(wk.failed)

        wk.state = self.seqqual_bad_id.copy()
        wk.validate_ids()
        self.assertFalse(wk.failed)