def get_dataset_details_dict(id_dataset, session_role):
"""
Return a dataset from TDatasetDetails model (with all relationships)
return also the number of taxon and observation of the dataset
Use for get_one datasert
"""
q = DB.session.query(TDatasetDetails)
q = cruved_filter(q, TDatasetDetails, session_role)
try:
data = q.filter(TDatasetDetails.id_dataset == id_dataset).one()
except NoResultFound:
return None
dataset = data.as_dict(True)
dataset["taxa_count"] = (
DB.session.query(Synthese.cd_nom)
.filter(Synthese.id_dataset == id_dataset)
.distinct()
.count()
)
dataset["observation_count"] = (
DB.session.query(Synthese.cd_nom)
.filter(Synthese.id_dataset == id_dataset)
.count()
)
geojsonData = (
DB.session.query(func.ST_AsGeoJSON(func.ST_Extent(Synthese.the_geom_4326)))
.filter(Synthese.id_dataset == id_dataset)
.first()[0]
)
if geojsonData:
dataset["bbox"] = json.loads(geojsonData)
return dataset
def get_acquisition_framework_details(id_acquisition_framework):
"""
Get one AF
.. :quickref: Metadata;
:param id_acquisition_framework: the id_acquisition_framework
:param type: int
"""
af = DB.session.query(TAcquisitionFrameworkDetails).get(
id_acquisition_framework)
if not af:
return None
acquisition_framework = af.as_dict(True)
datasets = acquisition_framework[
"datasets"] if "datasets" in acquisition_framework else []
dataset_ids = [d["id_dataset"] for d in datasets]
geojsonData = (DB.session.query(
func.ST_AsGeoJSON(func.ST_Extent(Synthese.the_geom_4326))).filter(
Synthese.id_dataset.in_(dataset_ids)).first()[0])
if geojsonData:
acquisition_framework["bbox"] = json.loads(geojsonData)
nb_data = len(dataset_ids)
nb_taxons = (DB.session.query(Synthese.cd_nom).filter(
Synthese.id_dataset.in_(dataset_ids)).distinct().count())
nb_observations = (DB.session.query(Synthese.cd_nom).filter(
Synthese.id_dataset.in_(dataset_ids)).count())
nb_habitat = 0
# Check if pr_occhab exist
check_schema_query = exists(
select([text("schema_name")
]).select_from(text("information_schema.schemata")).where(
text("schema_name = 'pr_occhab'")))
if DB.session.query(check_schema_query).scalar() and nb_data > 0:
query = (
"SELECT count(*) FROM pr_occhab.t_stations s, pr_occhab.t_habitats h WHERE s.id_station = h.id_station AND s.id_dataset in \
(" + str(dataset_ids).strip("[]") + ")")
nb_habitat = DB.engine.execute(text(query)).first()[0]
acquisition_framework["stats"] = {
"nb_data": nb_data,
"nb_taxons": nb_taxons,
"nb_observations": nb_observations,
"nb_habitats": nb_habitat,
}
if acquisition_framework:
return acquisition_framework
return None
def get_acquisition_framework_bbox(info_role, id_acquisition_framework):
"""
Get BBOX from one AF
.. :quickref: Metadata;
:param id_acquisition_framework: the id_acquisition_framework
:param type: int
"""
datasets = TDatasets.query.filter(
TDatasets.id_acquisition_framework == id_acquisition_framework).all()
dataset_ids = [d.id_dataset for d in datasets]
geojsonData = (DB.session.query(
func.ST_AsGeoJSON(func.ST_Extent(Synthese.the_geom_4326))).filter(
Synthese.id_dataset.in_(dataset_ids)).first()[0])
return json.loads(geojsonData) if geojsonData else None