def _finalise(self, num_steps):
"""
Updates the setting file with changes that occured in the vmd file.
Will also display the img or stitch the movie. It will finally collect
garbage.
"""
io.settings_update(self.all_settings)
self._copy_settings_file()
self._store_imgs()
if not all_settings['calibrate']:
self._stitch_movie()
else:
self._display_img()
self._garbage_collector()
def _display_img(self):
"""
Displays the created image in the default viewer. Only works in linux!
"""
if self.all_settings['mols_plotted'] > 0:
if self.all_settings['load_in_vmd']:
self.all_settings['tcl']['pic_filename'][self.PID] = \
self.tga_filepath
io.vmd_variable_writer(self.all_settings, self.PID)
vmd_bin = self.all_settings['vmd_exe']
os.system(f"{vmd_bin} -nt -e {self.all_settings['vmd_script'][self.PID]}")
io.settings_update(self.all_settings)
if self.all_settings['show_img_after_vmd']:
open_pic_cmd = "xdg-open %s" % (self.tga_filepath)
subprocess.call(open_pic_cmd, shell=True)
else:
EXC.WARN("There were no wavefunctions plotted on the molecules!")
