def get_endpoint_path(self, endpoint_id):
'''return the first fullpath to a folder in the endpoint based on
expanding the user's home from the globus config file. This
function is fragile but I don't see any other way to do it.
Parameters
==========
endpoint_id: the endpoint id to look up the path for
'''
config = os.path.expanduser("~/.globusonline/lta/config-paths")
if not os.path.exists(config):
bot.error('%s not found for a local Globus endpoint.')
sys.exit(1)
path = None
# Read in the config and get the root path
config = [x.split(',')[0] for x in read_file(config)]
for path in config:
if os.path.exists(path):
break
# If we don't have an existing path, exit
if path is None:
bot.error('No path was found for a local Globus endpoint.')
sys.exit(1)
return path
def test_write_read_files(tmp_path):
'''test_write_read_files will test the functions write_file and read_file
'''
print("Testing utils.write_file...")
from sregistry.utils import write_file
tmpfile = str(tmp_path / 'written_file.txt')
assert not os.path.exists(tmpfile)
write_file(tmpfile, "hello!")
assert os.path.exists(tmpfile)
print("Testing utils.read_file...")
from sregistry.utils import read_file
content = read_file(tmpfile)[0]
assert content == "hello!"
def logs(content=''):
'''return a plain text log to parse into any view for the user
'''
logfile = '/tmp/tunel-server-%s.log' % app.config.get('ROBOTNAME')
if os.path.exists(logfile):
content = read_file(logfile)
if not isinstance(content, list):
content = [content]
# Add the name of the log as the first line
content = [logfile + '\n'] + content
return Response(content, status=200, mimetype='text/plain')
def get_build_template(name=None, manager="apt"):
"""get a particular build template, by default we return templates
that are based on package managers.
Parameters
==========
name: the full path of the template file to use.
manager: the package manager to use in the template (yum or apt)
"""
base = get_installdir()
if name is None:
name = "%s/main/templates/build/singularity-builder-%s.sh" % (base, manager)
if os.path.exists(name):
bot.debug("Found template %s" % name)
return "".join(read_file(name))
bot.warning("Template %s not found." % name)