Beispiel #1
0
def get_metadata():
    project_config = read_project_config()
    results_obj = {
        'uniprot_query': project_config['uniprot_query'],
        'uniprot_domain_regex': project_config['uniprot_domain_regex'],
    }

    # = Return data in JSON format =
    response = make_response(jsonify(results_obj))
    return response
Beispiel #2
0
 def __init__(self, run_main=True):
     self.project_config = read_project_config()
     self.crawldata_row = models.CrawlData.query.first()
     self.current_crawl_number = self.crawldata_row.current_crawl_number
     self.safe_crawl_datestamp = self.crawldata_row.safe_crawl_datestamp
     self.current_crawl_datestamps_row = models.DateStamps.query.filter_by(crawl_number=self.current_crawl_number).first()
     if run_main:
         self.check_all_gather_scripts_have_been_run()
         self.update_crawl_numbers()
         self.update_datestamps()
         self.delete_old_crawls()
         self.commit()
Beispiel #3
0
 def __init__(self, run_main=True):
     self.project_config = read_project_config()
     self.crawldata_row = models.CrawlData.query.first()
     self.current_crawl_number = self.crawldata_row.current_crawl_number
     self.safe_crawl_datestamp = self.crawldata_row.safe_crawl_datestamp
     self.current_crawl_datestamps_row = models.DateStamps.query.filter_by(crawl_number=self.current_crawl_number).first()
     if run_main:
         self.check_all_gather_scripts_have_been_run()
         self.update_crawl_numbers()
         self.update_datestamps()
         self.delete_old_crawls()
         self.commit()
Beispiel #4
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import os
from flask import Flask
from flask.ext.sqlalchemy import SQLAlchemy
from targetexplorer.core import read_project_config

targetexplorer_flaskapp_dir = os.path.dirname(__file__)

app = Flask(__name__)
db = SQLAlchemy(app)
project_config = read_project_config()
app.config.update(
    SQLALCHEMY_DATABASE_URI=project_config.get('sqlalchemy_database_uri'))
import models
Beispiel #5
0
import os
from flask import Flask
from flask.ext.sqlalchemy import SQLAlchemy
from targetexplorer.core import read_project_config

targetexplorer_flaskapp_dir = os.path.dirname(__file__)

app = Flask(__name__)
db = SQLAlchemy(app)
project_config = read_project_config()
app.config.update(
    SQLALCHEMY_DATABASE_URI=project_config.get('sqlalchemy_database_uri')
)
import models