def __init__(self, parent=None, paramfile=None, paramdictname=None):
super(Paradigm2AFC, self).__init__(parent)
self.name = '2afc'
smServerType = rigsettings.STATE_MACHINE_TYPE
# -- Sides plot --
sidesplot.set_pg_colors(self)
self.mySidesPlot = sidesplot.SidesPlot(nTrials=120)
# -- Module for saving data --
self.saveData = savedata.SaveData(rigsettings.DATA_DIR, remotedir=rigsettings.REMOTE_DIR)
# -- Create an empty state matrix --
self.sm = statematrix.StateMatrix(inputs=rigsettings.INPUTS,
outputs=rigsettings.OUTPUTS,
readystate='readyForNextTrial')
# -- Add parameters --
self.params = paramgui.Container()
self.params['trainer'] = paramgui.StringParam('Trainer (initials)',
value='',
group='Session info')
self.params['experimenter'] = paramgui.StringParam('Experimenter',
value='experimenter',
group='Session info')
self.params['subject'] = paramgui.StringParam('Subject',value='subject',
group='Session info')
self.sessionInfo = self.params.layout_group('Session info')
# -- Create dispatcher --
self.dispatcherModel = dispatcher.Dispatcher(serverType=smServerType,interval=0.1)
self.dispatcherView = dispatcher.DispatcherGUI(model=self.dispatcherModel)
# -- Connect to sound server and define sounds --
# FINISH
# -- Manual control of outputs --
self.manualControl = manualcontrol.ManualControl(self.dispatcherModel.statemachine)
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Center in screen --
self._center_in_screen()
# -- Add variables storing results --
self.results = arraycontainer.Container()
# -- Connect signals from dispatcher --
self.dispatcherModel.prepareNextTrial.connect(self.prepare_next_trial)
self.dispatcherModel.timerTic.connect(self._timer_tic)
# -- Connect messenger --
self.messagebar = messenger.Messenger()
self.messagebar.timedMessage.connect(self._show_message)
self.messagebar.collect('Created window')
# -- Connect signals to messenger
self.saveData.logMessage.connect(self.messagebar.collect)
self.dispatcherModel.logMessage.connect(self.messagebar.collect)
# -- Connect other signals --
self.saveData.buttonSaveData.clicked.connect(self.save_to_file)
def __init__(self, parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
#self.setStyleSheet(stylesheets.styleCompact)
# -- Read settings --
smServerType = rigsettings.STATE_MACHINE_TYPE
#smServerType = 'dummy'
# -- Module for saving data --
self.saveData = savedata.SaveData(rigsettings.DATA_DIR)
# -- Sides plot --
sidesplot.set_pg_colors(self)
self.mySidesPlot = sidesplot.SidesPlot(nTrials=80)
# -- Create an empty state matrix --
self.sm = statematrix.StateMatrix(inputs=rigsettings.INPUTS,
outputs=rigsettings.OUTPUTS,
readystate='ready_next_trial')
# -- Add parameters --
self.params = paramgui.Container()
self.params['experimenter'] = paramgui.StringParam(
'Experimenter', value='santiago', group='Session info')
self.params['subject'] = paramgui.StringParam('Subject',
value='saja000',
group='Session info')
sessionInfo = self.params.layout_group('Session info')
self.params['stimulusDuration'] = paramgui.NumericParam(
'Stim duration', value=0.2, group='Timing parameters')
self.params['rewardDuration'] = paramgui.NumericParam(
'Reward duration', value=0.05, group='Timing parameters')
timingParams = self.params.layout_group('Timing parameters')
# -- Load parameters from a file --
#self.params.from_file('params_008.py','saja002') ### DEBUG
self.params.from_file(paramfile, paramdictname)
# -- Create dispatcher --
self.dispatcherModel = dispatcher.Dispatcher(serverType=smServerType,
interval=0.3)
self.dispatcherView = dispatcher.DispatcherGUI(
model=self.dispatcherModel)
# -- Manual control of outputs --
self.manualControl = manualcontrol.ManualControl(
self.dispatcherModel.statemachine)
# -- Add graphical widgets to main window --
centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(timingParams)
layoutCol2.addWidget(self.manualControl)
centralWidget.setLayout(layoutMain)
self.setCentralWidget(centralWidget)
# -- Center in screen --
self.center_in_screen()
# -- Add variables for storing results --
maxNtrials = 4000
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left': 0, 'right': 1}
self.results['rewardSide'] = np.random.randint(2, size=maxNtrials)
self.results.labels['choice'] = {'left': 0, 'right': 1, 'none': 2}
self.results['choice'] = np.empty(maxNtrials, dtype=int)
self.results.labels['outcome'] = {
'correct': 1,
'error': 0,
'invalid': 2
}
self.results['outcome'] = np.empty(maxNtrials, dtype=int)
self.results['timeTrialStart'] = np.empty(maxNtrials, dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials, dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials, dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials, dtype=float)
# --- Create state matrix ---
#self.set_state_matrix() ################# ?????????????
# -- Connect signals from dispatcher --
self.dispatcherModel.prepareNextTrial.connect(self.prepare_next_trial)
###self.dispatcherModel.startNewTrial.connect(self.start_new_trial)
self.dispatcherModel.timerTic.connect(self.timer_tic)
# -- Connect messenger --
self.messagebar = messenger.Messenger()
self.messagebar.timedMessage.connect(self.show_message)
#self.messagebar.timedMessage.emit('Created window')
self.messagebar.collect('Created window')
# -- Connect signals to messenger
self.saveData.logMessage.connect(self.messagebar.collect)
self.dispatcherModel.logMessage.connect(self.messagebar.collect)
# -- Connect other signals --
self.saveData.buttonSaveData.clicked.connect(self.save_to_file)
# -- Prepare first trial --
self.prepare_next_trial(0)
def __init__(self, parent=None, paramfile=None, paramdictname=None):
super(Paradigm2AFC, self).__init__(parent)
self.name = '2afc'
smServerType = rigsettings.STATE_MACHINE_TYPE
# -- Sides plot --
sidesplot.set_pg_colors(self)
self.mySidesPlot = sidesplot.SidesPlot(nTrials=120)
# -- Module for saving data --
self.saveData = savedata.SaveData(rigsettings.DATA_DIR, remotedir=rigsettings.REMOTE_DIR)
# -- Create an empty state matrix --
self.sm = statematrix.StateMatrix(inputs=rigsettings.INPUTS,
outputs=rigsettings.OUTPUTS,
readystate='readyForNextTrial')
# -- Add parameters --
self.params = paramgui.Container()
self.params['trainer'] = paramgui.StringParam('Trainer (initials)',
value='',
group='Session info')
self.params['experimenter'] = paramgui.StringParam('Experimenter',
value='experimenter',
group='Session info')
self.params['subject'] = paramgui.StringParam('Subject',value='subject',
group='Session info')
self.sessionInfo = self.params.layout_group('Session info')
# -- Create dispatcher --
self.dispatcherModel = dispatcher.Dispatcher(serverType=smServerType,interval=0.1)
self.dispatcherView = dispatcher.DispatcherGUI(model=self.dispatcherModel)
# -- Connect to sound server and define sounds --
# FINISH
# -- Manual control of outputs --
self.manualControl = manualcontrol.ManualControl(self.dispatcherModel.statemachine)
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Center in screen --
self._center_in_screen()
# -- Add variables storing results --
self.results = arraycontainer.Container()
# -- Connect signals from dispatcher --
self.dispatcherModel.prepareNextTrial.connect(self.prepare_next_trial)
self.dispatcherModel.timerTic.connect(self._timer_tic)
# -- Connect messenger --
self.messagebar = messenger.Messenger()
self.messagebar.timedMessage.connect(self._show_message)
self.messagebar.collect('Created window')
# -- Connect signals to messenger
self.saveData.logMessage.connect(self.messagebar.collect)
self.dispatcherModel.logMessage.connect(self.messagebar.collect)
# -- Connect other signals --
self.saveData.buttonSaveData.clicked.connect(self.save_to_file)
def __init__(self, parent=None):
super(Paradigm, self).__init__(parent)
# -- Read settings --
smServerType = rigsettings.STATE_MACHINE_TYPE
#smServerType = 'dummy'
# -- Create dispatcher --
self.dispatcherModel = dispatcher.Dispatcher(serverType=smServerType,interval=0.3)
self.dispatcherView = dispatcher.DispatcherGUI(model=self.dispatcherModel)
# -- Module for saving data --
self.saveData = savedata.SaveData()
# -- Sides plot --
sidesplot.set_pg_colors(self)
self.mySidesPlot = sidesplot.SidesPlot(nTrials=80)
# -- Create an empty state matrix --
###self.sm = statematrix.StateMatrix()
# -- Add parameters --
self.params = paramgui.Container()
self.params['stimulusDuration'] = paramgui.NumericParam('Stim duration',value=0.2,
group='Timing Parameters')
self.params['rewardDuration'] = paramgui.NumericParam('Reward duration',value=0.05,
group='Timing Parameters')
timingParams = self.params.layout_group('Timing Parameters')
# -- Add graphical widgets to main window --
centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(timingParams)
centralWidget.setLayout(layoutMain)
self.setCentralWidget(centralWidget)
# -- Center in screen --
self.center_in_screen()
# -- Add variables storing results --
# FIXME: put all these in one dict that can be easily saved
self.results = arraycontainer.Container()
maxNtrials = 4000
self.results.labels['rewardSide'] = {'left':0,'right':1}
self.results['rewardSide'] = np.random.randint(2,size=maxNtrials)
self.results.labels['choice'] = {'left':0,'right':1}
self.results['choice'] = np.empty(maxNtrials,dtype=int)
self.results.labels['outcome'] = {'correct':1,'error':0}
self.results['outcome'] = np.empty(maxNtrials,dtype=int)
# --- Create state matrix ---
#self.set_state_matrix() ################# ?????????????
# -- Connect signals from dispatcher --
self.dispatcherModel.prepareNextTrial.connect(self.prepare_next_trial)
###self.dispatcherModel.startNewTrial.connect(self.start_new_trial)
self.dispatcherModel.timerTic.connect(self.timer_tic)
# -- Connect messenger --
self.messagebar = messenger.Messenger()
self.messagebar.timedMessage.connect(self.show_message)
#self.messagebar.timedMessage.emit('Created window')
self.messagebar.collect('Created window')
# -- Connect signals to messenger
self.saveData.logMessage.connect(self.messagebar.collect)
self.dispatcherModel.logMessage.connect(self.messagebar.collect)
# -- Connect other signals --
self.saveData.buttonSaveData.clicked.connect(self.save_to_file)
# -- Prepare first trial --
self.prepare_next_trial(0)
def __init__(self, parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
#self.setStyleSheet(stylesheets.styleCompact)
# -- Read settings --
smServerType = rigsettings.STATE_MACHINE_TYPE
#smServerType = 'dummy'
# -- Module for saving data --
self.saveData = savedata.SaveData(rigsettings.DATA_DIR)
# -- Sides plot --
sidesplot.set_pg_colors(self)
self.mySidesPlot = sidesplot.SidesPlot(nTrials=80)
# -- Create an empty state matrix --
self.sm = statematrix.StateMatrix(inputs=rigsettings.INPUTS,
outputs=rigsettings.OUTPUTS,
readystate='ready_next_trial')
# -- Add parameters --
self.params = paramgui.Container()
self.params['experimenter'] = paramgui.StringParam('Experimenter',value='santiago',
group='Session info')
self.params['subject'] = paramgui.StringParam('Subject',value='saja000',
group='Session info')
sessionInfo = self.params.layout_group('Session info')
self.params['stimulusDuration'] = paramgui.NumericParam('Stim duration',value=0.2,
group='Timing parameters')
self.params['rewardDuration'] = paramgui.NumericParam('Reward duration',value=0.05,
group='Timing parameters')
timingParams = self.params.layout_group('Timing parameters')
# -- Load parameters from a file --
#self.params.from_file('params_008.py','saja002') ### DEBUG
self.params.from_file(paramfile,paramdictname)
# -- Create dispatcher --
self.dispatcherModel = dispatcher.Dispatcher(serverType=smServerType,interval=0.3)
self.dispatcherView = dispatcher.DispatcherGUI(model=self.dispatcherModel)
# -- Manual control of outputs --
self.manualControl = manualcontrol.ManualControl(self.dispatcherModel.statemachine)
# -- Add graphical widgets to main window --
centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(timingParams)
layoutCol2.addWidget(self.manualControl)
centralWidget.setLayout(layoutMain)
self.setCentralWidget(centralWidget)
# -- Center in screen --
self.center_in_screen()
# -- Add variables for storing results --
maxNtrials = 4000
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left':0,'right':1}
self.results['rewardSide'] = np.random.randint(2,size=maxNtrials)
self.results.labels['choice'] = {'left':0,'right':1,'none':2}
self.results['choice'] = np.empty(maxNtrials,dtype=int)
self.results.labels['outcome'] = {'correct':1,'error':0,'invalid':2}
self.results['outcome'] = np.empty(maxNtrials,dtype=int)
self.results['timeTrialStart'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials,dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials,dtype=float)
# --- Create state matrix ---
#self.set_state_matrix() ################# ?????????????
# -- Connect signals from dispatcher --
self.dispatcherModel.prepareNextTrial.connect(self.prepare_next_trial)
###self.dispatcherModel.startNewTrial.connect(self.start_new_trial)
self.dispatcherModel.timerTic.connect(self.timer_tic)
# -- Connect messenger --
self.messagebar = messenger.Messenger()
self.messagebar.timedMessage.connect(self.show_message)
#self.messagebar.timedMessage.emit('Created window')
self.messagebar.collect('Created window')
# -- Connect signals to messenger
self.saveData.logMessage.connect(self.messagebar.collect)
self.dispatcherModel.logMessage.connect(self.messagebar.collect)
# -- Connect other signals --
self.saveData.buttonSaveData.clicked.connect(self.save_to_file)
# -- Prepare first trial --
self.prepare_next_trial(0)
