def test_h_start_with_gap2():
assert (sail._h_start(hit_seq="AAACCG", h_seq="C-C", h_strand=-1) == 2)
def test_h_start4():
assert (sail._h_start(hit_seq="AAACCG", h_seq="CC", h_strand=-1) == 2)
def test_h_start_with_gap():
assert (sail._h_start(hit_seq="ATGATG", h_seq="A-TGA", h_strand=1) == 0)
def test_h_start2():
assert (sail._h_start(hit_seq="ATGATG", h_seq="GATG", h_strand=1) == 2)