def batch_predict_loop(model, inputs, batch_size, verbose=0):
"""Predict function for eager execution when input is arrays or tensors.
Arguments:
model: Instance of `Model`.
inputs: List of input arrays.
batch_size: Integer batch size.
verbose: Verbosity mode.
Returns:
Array of predictions (if the model has a single output)
or list of arrays of predictions (if the model has multiple outputs).
"""
outs = []
num_samples = training_utils.check_num_samples(inputs, batch_size)
if verbose == 1:
progbar = generic_utils.Progbar(target=num_samples)
batches = generic_utils.make_batches(num_samples, batch_size)
index_array = np.arange(num_samples)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
inputs_batch = slice_arrays(inputs, batch_ids)
inputs_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in inputs_batch
]
if len(inputs_batch) == 1:
if model._expects_training_arg:
batch_outs = model.call(inputs_batch[0], training=False)
else:
batch_outs = model.call(inputs_batch[0])
else:
if model._expects_training_arg:
batch_outs = model.call(inputs_batch, training=False)
else:
batch_outs = model.call(inputs_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if batch_index == 0:
# Pre-allocate the results arrays.
for batch_out in batch_outs:
dims = batch_out.shape[1:].dims
dims_list = [d.value for d in dims]
shape = (num_samples, ) + tuple(dims_list)
outs.append(
np.zeros(shape, dtype=batch_out.dtype.as_numpy_dtype))
for i, batch_out in enumerate(batch_outs):
outs[i][batch_start:batch_end] = batch_out
if verbose == 1:
progbar.update(batch_end)
if len(outs) == 1:
return outs[0]
return outs
def batch_predict_loop(model, inputs, batch_size, verbose=0):
"""Predict function for eager execution when input is arrays or tensors.
Arguments:
model: Instance of `Model`.
inputs: List of input arrays.
batch_size: Integer batch size.
verbose: Verbosity mode.
Returns:
Array of predictions (if the model has a single output)
or list of arrays of predictions (if the model has multiple outputs).
"""
outs = []
num_samples = training_utils.check_num_samples(inputs, batch_size)
if verbose == 1:
progbar = generic_utils.Progbar(target=num_samples)
batches = generic_utils.make_batches(num_samples, batch_size)
index_array = np.arange(num_samples)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
inputs_batch = slice_arrays(inputs, batch_ids)
inputs_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in inputs_batch
]
if len(inputs_batch) == 1:
if model._expects_training_arg:
batch_outs = model.call(inputs_batch[0], training=False)
else:
batch_outs = model.call(inputs_batch[0])
else:
if model._expects_training_arg:
batch_outs = model.call(inputs_batch, training=False)
else:
batch_outs = model.call(inputs_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if batch_index == 0:
# Pre-allocate the results arrays.
for batch_out in batch_outs:
dims = batch_out.shape[1:].dims
dims_list = [d.value for d in dims]
shape = (num_samples,) + tuple(dims_list)
outs.append(np.zeros(shape, dtype=batch_out.dtype.as_numpy_dtype))
for i, batch_out in enumerate(batch_outs):
outs[i][batch_start:batch_end] = batch_out
if verbose == 1:
progbar.update(batch_end)
if len(outs) == 1:
return outs[0]
return outs
def _gen(data):
"""Makes a generator out of a structure of NumPy/EagerTensors."""
index_array = np.arange(num_samples)
for _ in range(epochs):
if shuffle:
np.random.shuffle(index_array)
batches = generic_utils.make_batches(num_samples, batch_size)
for (batch_start, batch_end) in batches:
batch_ids = index_array[batch_start:batch_end]
flat_batch_data = training_utils.slice_arrays(
nest.flatten(data), batch_ids, contiguous=(not shuffle))
yield nest.pack_sequence_as(data, flat_batch_data)
def _gen(data):
"""Makes a generator out of a structure of NumPy/EagerTensors."""
index_array = np.arange(num_samples)
for _ in range(epochs):
if shuffle:
np.random.shuffle(index_array)
batches = generic_utils.make_batches(num_samples, batch_size)
for (batch_start, batch_end) in batches:
batch_ids = index_array[batch_start:batch_end]
flat_batch_data = training_utils.slice_arrays(
nest.flatten(data), batch_ids, contiguous=(not shuffle))
yield nest.pack_sequence_as(data, flat_batch_data)
def model_iteration(model,
inputs,
targets=None,
sample_weights=None,
batch_size=None,
epochs=1,
verbose=1,
callbacks=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
shuffle=True,
initial_epoch=0,
steps_per_epoch=None,
validation_steps=None,
mode='train',
**kwargs):
"""Loop function for arrays of data with modes 'train'/'test'/'predict'.
Arguments:
model: Keras Model instance.
inputs: Either a list of arrays or a dictionary.
targets: List of target arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: Integer batch size or None if unknown.
epochs: Number of times to iterate over the data
verbose: Verbosity mode, 0, 1 or 2
callbacks: List of callbacks to be called during training
val_inputs: List of input arrays.
val_targets: List of target arrays.
val_sample_weights: Optional list of sample weight arrays.
shuffle: Whether to shuffle the data at the beginning of each epoch
concatenation of list the display names of the outputs of `f` and the
list of display names of the outputs of `f_val`.
initial_epoch: Epoch at which to start training (useful for resuming a
previous training run)
steps_per_epoch: Total number of steps (batches of samples) before
declaring one epoch finished and starting the next epoch. Ignored with
the default value of `None`.
validation_steps: Number of steps to run validation for (only if doing
validation from data tensors). Ignored with the default value of `None`.
mode: One of 'train'/'test'/'predict'.
**kwargs: Additional arguments for backwards compatibility.
Returns:
- In 'train' mode: `History` object.
- In 'test' mode: Evaluation metrics.
- In 'predict' mode: Outputs of the Model called on inputs.
Raises:
ValueError: in case of invalid arguments.
"""
# Backwards compatibility.
if 'steps' in kwargs:
steps_per_epoch = kwargs['steps']
_validate_arguments(steps_per_epoch, validation_steps, kwargs)
if mode == 'train':
_print_train_info(inputs, val_inputs, steps_per_epoch, verbose)
# Get step function and loop type.
f = model._get_execution_function(mode)
use_steps = steps_per_epoch is not None
do_validation = val_inputs is not None
# Prepare input data.
inputs = training_utils.ModelInputs(inputs).as_list()
targets = targets or []
sample_weights = sample_weights or []
learning_phase_input = []
if not isinstance(K.symbolic_learning_phase(), int):
learning_phase_input = [True] if mode == 'train' else [False]
ins = inputs + targets + sample_weights + learning_phase_input
num_samples_or_steps = _get_num_samples_or_steps(ins, batch_size,
steps_per_epoch)
# Configure callbacks.
count_mode = 'steps' if use_steps else 'samples'
callbacks = cbks.configure_callbacks(
callbacks,
model,
do_validation=do_validation,
val_inputs=val_inputs,
val_targets=val_targets,
val_sample_weights=val_sample_weights,
batch_size=batch_size,
epochs=epochs,
steps_per_epoch=steps_per_epoch,
samples=num_samples_or_steps,
validation_steps=validation_steps,
verbose=0, # Handle ProgBarLogger separately in this loop.
count_mode=count_mode,
mode=mode)
# TODO(omalleyt): Handle ProgBar as part of Callbacks once hooks are ready.
progbar = _get_progbar(model, count_mode)
progbar.params = callbacks.params
progbar.params['verbose'] = verbose
# Find beforehand arrays that need sparse-to-dense conversion.
if issparse is not None:
indices_for_conversion_to_dense = []
feed = _get_model_feed(model, mode)
for i, (input_data, feed_tensor) in enumerate(zip(ins, feed)):
if issparse(input_data) and not K.is_sparse(feed_tensor):
indices_for_conversion_to_dense.append(i)
# Select aggregation method.
if mode == 'predict':
aggregator = OutputsAggregator(use_steps, num_samples_or_steps)
else:
aggregator = MetricsAggregator(use_steps, num_samples_or_steps)
callbacks.model.stop_training = False
callbacks._call_begin_hook(mode)
progbar.on_train_begin()
for epoch in range(initial_epoch, epochs):
if callbacks.model.stop_training:
break
# Setup work for each epoch
results = []
epoch_logs = {}
if hasattr(model, 'stateful_metric_functions'):
for m in model.stateful_metric_functions:
m.reset_states()
callbacks.on_epoch_begin(epoch, epoch_logs, mode=mode)
progbar.on_epoch_begin(epoch, epoch_logs)
if use_steps:
# Step-wise loop.
for step in range(steps_per_epoch):
batch_logs = {'batch': step, 'size': 1}
callbacks._call_batch_hook(mode, 'begin', step, batch_logs)
progbar.on_batch_begin(step, batch_logs)
# Get outputs.
try:
batch_outs = f(ins)
except errors.OutOfRangeError:
logging.warning('Your dataset iterator ran out of data; '
'interrupting training. Make sure that your dataset '
'can generate at least `steps_per_epoch * epochs` '
'batches (in this case, %d batches). You may need to'
'use the repeat() function when building your '
'dataset.' %
steps_per_epoch * epochs)
break
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
# Aggregate results.
if step == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs)
# Callbacks batch end.
batch_logs.update(_make_logs(model, batch_outs, mode))
callbacks._call_batch_hook(mode, 'end', step, batch_logs)
progbar.on_batch_end(step, batch_logs)
if callbacks.model.stop_training:
break
else:
# Sample-wise loop.
index_array = np.arange(num_samples_or_steps)
if shuffle == 'batch':
index_array = training_utils.batch_shuffle(index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = make_batches(num_samples_or_steps, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
# Slice into a batch.
try:
if ins and isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1], batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
except TypeError:
raise TypeError('TypeError while preparing batch. '
'If using HDF5 input data, '
'pass shuffle="batch".')
# Sparse to dense conversion.
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
# Callbacks batch_begin.
batch_logs = {'batch': batch_index, 'size': len(batch_ids)}
callbacks._call_batch_hook(mode, 'begin', batch_index, batch_logs)
progbar.on_batch_begin(batch_index, batch_logs)
# Get outputs.
batch_outs = f(ins_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
# Aggregate results.
if batch_index == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs, batch_start, batch_end)
# Callbacks batch end.
batch_logs.update(_make_logs(model, batch_outs, mode))
callbacks._call_batch_hook(mode, 'end', batch_index, batch_logs)
progbar.on_batch_end(batch_index, batch_logs)
if callbacks.model.stop_training:
break
aggregator.finalize()
results = aggregator.results
epoch_logs.update(_make_logs(model, results, mode))
if len(results) == 1:
results = results[0]
# Run the test loop every epoch during training.
if do_validation and not callbacks.model.stop_training:
val_results = model_iteration(
model,
val_inputs,
targets=val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
steps_per_epoch=validation_steps,
callbacks=callbacks,
verbose=0,
mode='test')
if not isinstance(val_results, list):
val_results = [val_results]
epoch_logs.update(_make_logs(model, val_results, mode, prefix='val_'))
callbacks.on_epoch_end(epoch, epoch_logs, mode=mode)
progbar.on_epoch_end(epoch, epoch_logs)
callbacks._call_end_hook(mode)
if mode == 'train':
return model.history
return results
def predict_loop(model, inputs, batch_size=32, verbose=0, steps=None):
"""Abstract method to loop over some data in batches.
Arguments:
model: Keras Model instance.
inputs: list of tensors to be fed to `f`.
batch_size: integer batch size.
verbose: verbosity mode.
steps: Total number of steps (batches of samples)
before declaring `_predict_loop` finished.
Ignored with the default value of `None`.
Returns:
Array of predictions (if the model has a single output)
or list of arrays of predictions
(if the model has multiple outputs).
"""
model._make_predict_function()
f = model.predict_function
if model.uses_learning_phase and not isinstance(K.learning_phase(), int):
ins = inputs + [0]
else:
ins = inputs
num_samples = training_utils.check_num_samples(
inputs, batch_size, steps, 'steps')
if verbose == 1:
if steps is not None:
progbar = Progbar(target=steps)
else:
progbar = Progbar(target=num_samples)
indices_for_conversion_to_dense = []
for i in range(len(model._feed_inputs)):
if (issparse is not None and issparse(inputs[i]) and
not K.is_sparse(model._feed_inputs[i])):
indices_for_conversion_to_dense.append(i)
if steps is not None:
# Step-based predictions.
# Since we do not know how many samples
# we will see, we cannot pre-allocate
# the returned Numpy arrays.
# Instead, we store one array per batch seen
# and concatenate them upon returning.
unconcatenated_outs = []
for step in range(steps):
batch_outs = f(ins)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if step == 0:
for batch_out in batch_outs:
unconcatenated_outs.append([])
for i, batch_out in enumerate(batch_outs):
unconcatenated_outs[i].append(batch_out)
if verbose == 1:
progbar.update(step + 1)
if len(unconcatenated_outs) == 1:
return np.concatenate(unconcatenated_outs[0], axis=0)
return [
np.concatenate(unconcatenated_outs[i], axis=0)
for i in range(len(unconcatenated_outs))
]
else:
# Sample-based predictions.
outs = []
batches = make_batches(num_samples, batch_size)
index_array = np.arange(num_samples)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
if ins and isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1], batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
batch_outs = f(ins_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if batch_index == 0:
# Pre-allocate the results arrays.
for batch_out in batch_outs:
shape = (num_samples,) + batch_out.shape[1:]
outs.append(np.zeros(shape, dtype=batch_out.dtype))
for i, batch_out in enumerate(batch_outs):
outs[i][batch_start:batch_end] = batch_out
if verbose == 1:
progbar.update(batch_end)
if len(outs) == 1:
return outs[0]
return outs
def fit_loop(model,
inputs,
targets,
sample_weights=None,
batch_size=None,
epochs=100,
verbose=1,
callbacks=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
shuffle=True,
callback_metrics=None,
initial_epoch=0,
steps_per_epoch=None,
validation_steps=None):
"""Abstract fit function for arrays of data.
Arguments:
model: Keras Model instance.
inputs: List of input arrays.
targets: List of target arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: Integer batch size or None if unknown.
epochs: Number of times to iterate over the data
verbose: Verbosity mode, 0, 1 or 2
callbacks: List of callbacks to be called during training
val_inputs: List of input arrays.
val_targets: List of target arrays.
val_sample_weights: Optional list of sample weight arrays.
shuffle: Whether to shuffle the data at the beginning of each epoch
callback_metrics: List of strings, the display names of the metrics
passed to the callbacks. They should be the
concatenation of list the display names of the outputs of
`f` and the list of display names of the outputs of `f_val`.
initial_epoch: Epoch at which to start training
(useful for resuming a previous training run)
steps_per_epoch: Total number of steps (batches of samples)
before declaring one epoch finished and starting the
next epoch. Ignored with the default value of `None`.
validation_steps: Number of steps to run validation for
(only if doing validation from data tensors).
Ignored with the default value of `None`.
Returns:
`History` object.
Raises:
ValueError: in case of invalid arguments.
"""
model._make_train_function()
f = model.train_function
sample_weights = sample_weights or []
val_sample_weights = val_sample_weights or []
if model.uses_learning_phase and not isinstance(K.learning_phase(), int):
ins = inputs + targets + sample_weights + [1]
if val_inputs:
val_ins = val_inputs + val_targets + val_sample_weights + [1]
else:
ins = inputs + targets + sample_weights
if val_inputs:
val_ins = val_inputs + val_targets + val_sample_weights
if not val_inputs:
val_ins = []
do_validation = False
if val_inputs:
do_validation = True
if (steps_per_epoch is None and verbose and inputs
and hasattr(inputs[0], 'shape')
and hasattr(val_inputs[0], 'shape')):
print('Train on %d samples, validate on %d samples' %
(inputs[0].shape[0], val_inputs[0].shape[0]))
if validation_steps:
do_validation = True
if steps_per_epoch is None:
raise ValueError('Can only use `validation_steps` '
'when doing step-wise '
'training, i.e. `steps_per_epoch` '
'must be set.')
out_labels = model.metrics_names
if do_validation:
callback_metrics = copy.copy(out_labels) + [
'val_' + n for n in out_labels
]
else:
callback_metrics = copy.copy(out_labels)
num_train_samples = training_utils.check_num_samples(
ins, batch_size, steps_per_epoch, 'steps_per_epoch')
if num_train_samples is not None:
index_array = np.arange(num_train_samples)
model.history = cbks.History()
all_callbacks = [
cbks.BaseLogger(stateful_metrics=model.stateful_metric_names)
]
if verbose:
if steps_per_epoch is not None:
count_mode = 'steps'
else:
count_mode = 'samples'
all_callbacks.append(
cbks.ProgbarLogger(count_mode,
stateful_metrics=model.stateful_metric_names))
all_callbacks += (callbacks or []) + [model.history]
callbacks = cbks.CallbackList(all_callbacks)
out_labels = out_labels or []
# it's possible to callback a different model than self
# (used by Sequential models)
if hasattr(model, 'callback_model') and model.callback_model:
callback_model = model.callback_model
else:
callback_model = model
callbacks.set_model(callback_model)
callbacks.set_params({
'batch_size': batch_size,
'epochs': epochs,
'steps': steps_per_epoch,
'samples': num_train_samples,
'verbose': verbose,
'do_validation': do_validation,
'metrics': callback_metrics or [],
})
callbacks.on_train_begin()
callback_model.stop_training = False
for cbk in callbacks:
cbk.validation_data = val_ins
# To prevent a slowdown, we find beforehand the arrays that need conversion.
feed = model._feed_inputs + model._feed_targets + model._feed_sample_weights
indices_for_conversion_to_dense = []
for i in range(len(feed)):
if issparse is not None and issparse(
ins[i]) and not K.is_sparse(feed[i]):
indices_for_conversion_to_dense.append(i)
for epoch in range(initial_epoch, epochs):
# Reset stateful metrics
for m in model.stateful_metric_functions:
m.reset_states()
# Update callbacks
callbacks.on_epoch_begin(epoch)
epoch_logs = {}
if steps_per_epoch is not None:
for step_index in range(steps_per_epoch):
batch_logs = {}
batch_logs['batch'] = step_index
batch_logs['size'] = 1
callbacks.on_batch_begin(step_index, batch_logs)
try:
outs = f(ins)
except errors.OutOfRangeError:
logging.warning(
'Your dataset iterator ran out of data; '
'interrupting training. Make sure that your dataset '
'can generate at least `steps_per_epoch * epochs` '
'batches (in this case, %d batches).' %
steps_per_epoch * epochs)
break
if not isinstance(outs, list):
outs = [outs]
for l, o in zip(out_labels, outs):
batch_logs[l] = o
callbacks.on_batch_end(step_index, batch_logs)
if callback_model.stop_training:
break
if do_validation:
val_outs = test_loop(model,
val_inputs,
val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
steps=validation_steps,
verbose=0)
if not isinstance(val_outs, list):
val_outs = [val_outs]
# Same labels assumed.
for l, o in zip(out_labels, val_outs):
epoch_logs['val_' + l] = o
else:
if shuffle == 'batch':
index_array = training_utils.batch_shuffle(
index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = make_batches(num_train_samples, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
try:
if isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1],
batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
except TypeError:
raise TypeError('TypeError while preparing batch. '
'If using HDF5 input data, '
'pass shuffle="batch".')
batch_logs = {}
batch_logs['batch'] = batch_index
batch_logs['size'] = len(batch_ids)
callbacks.on_batch_begin(batch_index, batch_logs)
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
outs = f(ins_batch)
if not isinstance(outs, list):
outs = [outs]
for l, o in zip(out_labels, outs):
batch_logs[l] = o
callbacks.on_batch_end(batch_index, batch_logs)
if callback_model.stop_training:
break
if batch_index == len(batches) - 1: # Last batch.
if do_validation:
val_outs = test_loop(model,
val_inputs,
val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
verbose=0)
if not isinstance(val_outs, list):
val_outs = [val_outs]
# Same labels assumed.
for l, o in zip(out_labels, val_outs):
epoch_logs['val_' + l] = o
callbacks.on_epoch_end(epoch, epoch_logs)
if callback_model.stop_training:
break
callbacks.on_train_end()
return model.history
def model_iteration(model,
inputs,
targets=None,
sample_weights=None,
batch_size=None,
epochs=1,
verbose=1,
callbacks=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
shuffle=True,
initial_epoch=0,
steps_per_epoch=None,
validation_steps=None,
mode='train',
**kwargs):
"""Loop function for arrays of data with modes 'train'/'test'/'predict'.
Arguments:
model: Keras Model instance.
inputs: Either a list of arrays or a dictionary.
targets: List of target arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: Integer batch size or None if unknown.
epochs: Number of times to iterate over the data
verbose: Verbosity mode, 0, 1 or 2
callbacks: List of callbacks to be called during training
val_inputs: List of input arrays.
val_targets: List of target arrays.
val_sample_weights: Optional list of sample weight arrays.
shuffle: Whether to shuffle the data at the beginning of each epoch
concatenation of list the display names of the outputs of `f` and the
list of display names of the outputs of `f_val`.
initial_epoch: Epoch at which to start training (useful for resuming a
previous training run)
steps_per_epoch: Total number of steps (batches of samples) before
declaring one epoch finished and starting the next epoch. Ignored with
the default value of `None`.
validation_steps: Number of steps to run validation for (only if doing
validation from data tensors). Ignored with the default value of `None`.
mode: One of 'train'/'test'/'predict'.
**kwargs: Additional arguments for backwards compatibility.
Returns:
- In 'train' mode: `History` object.
- In 'test' mode: Evaluation metrics.
- In 'predict' mode: Outputs of the Model called on inputs.
Raises:
ValueError: in case of invalid arguments.
"""
# Backwards compatibility.
if 'steps' in kwargs:
steps_per_epoch = kwargs['steps']
_validate_arguments(steps_per_epoch, validation_steps, kwargs)
if mode == 'train':
_print_train_info(inputs, val_inputs, steps_per_epoch, verbose)
# Get step function and loop type.
f = model._get_execution_function(mode)
use_steps = steps_per_epoch is not None
do_validation = val_inputs is not None
# Prepare input data.
inputs = training_utils.ModelInputs(inputs).as_list()
targets = targets or []
sample_weights = sample_weights or []
learning_phase_input = []
if not isinstance(K.symbolic_learning_phase(), int):
learning_phase_input = [True] if mode == 'train' else [False]
ins = inputs + targets + sample_weights + learning_phase_input
num_samples_or_steps = _get_num_samples_or_steps(ins, batch_size,
steps_per_epoch)
# Configure callbacks.
count_mode = 'steps' if use_steps else 'samples'
callbacks = cbks.configure_callbacks(
callbacks,
model,
do_validation=do_validation,
val_inputs=val_inputs,
val_targets=val_targets,
val_sample_weights=val_sample_weights,
batch_size=batch_size,
epochs=epochs,
steps_per_epoch=steps_per_epoch,
samples=num_samples_or_steps,
validation_steps=validation_steps,
verbose=0, # Handle ProgBarLogger separately in this loop.
count_mode=count_mode,
mode=mode)
# TODO(omalleyt): Handle ProgBar as part of Callbacks once hooks are ready.
progbar = _get_progbar(model, count_mode)
progbar.params = callbacks.params
progbar.params['verbose'] = verbose
# Find beforehand arrays that need sparse-to-dense conversion.
if issparse is not None:
indices_for_conversion_to_dense = []
feed = _get_model_feed(model, mode)
for i, (input_data, feed_tensor) in enumerate(zip(ins, feed)):
if issparse(input_data) and not K.is_sparse(feed_tensor):
indices_for_conversion_to_dense.append(i)
# Select aggregation method.
if mode == 'predict':
aggregator = OutputsAggregator(use_steps, num_samples_or_steps)
else:
aggregator = MetricsAggregator(use_steps, num_samples_or_steps)
callbacks.model.stop_training = False
callbacks._call_begin_hook(mode)
progbar.on_train_begin()
for epoch in range(initial_epoch, epochs):
if callbacks.model.stop_training:
break
# Setup work for each epoch
results = []
epoch_logs = {}
if hasattr(model, 'stateful_metric_functions'):
for m in model.stateful_metric_functions:
m.reset_states()
callbacks.on_epoch_begin(epoch, epoch_logs, mode=mode)
progbar.on_epoch_begin(epoch, epoch_logs)
if use_steps:
# Step-wise loop.
for step in range(steps_per_epoch):
batch_logs = {'batch': step, 'size': 1}
callbacks._call_batch_hook(mode, 'begin', step, batch_logs)
progbar.on_batch_begin(step, batch_logs)
# Get outputs.
try:
batch_outs = f(ins)
except errors.OutOfRangeError:
logging.warning(
'Your dataset iterator ran out of data; '
'interrupting training. Make sure that your dataset '
'can generate at least `steps_per_epoch * epochs` '
'batches (in this case, %d batches). You may need to'
'use the repeat() function when building your '
'dataset.' % steps_per_epoch * epochs)
break
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
# Aggregate results.
if step == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs)
# Callbacks batch end.
batch_logs.update(_make_logs(model, batch_outs, mode))
callbacks._call_batch_hook(mode, 'end', step, batch_logs)
progbar.on_batch_end(step, batch_logs)
if callbacks.model.stop_training:
break
else:
# Sample-wise loop.
index_array = np.arange(num_samples_or_steps)
if shuffle == 'batch':
index_array = training_utils.batch_shuffle(
index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = make_batches(num_samples_or_steps, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
# Slice into a batch.
try:
if ins and isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1],
batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
except TypeError:
raise TypeError('TypeError while preparing batch. '
'If using HDF5 input data, '
'pass shuffle="batch".')
# Sparse to dense conversion.
if issparse is not None:
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
# Callbacks batch_begin.
batch_logs = {'batch': batch_index, 'size': len(batch_ids)}
callbacks._call_batch_hook(mode, 'begin', batch_index,
batch_logs)
progbar.on_batch_begin(batch_index, batch_logs)
# Get outputs.
batch_outs = f(ins_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
# Aggregate results.
if batch_index == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs, batch_start, batch_end)
# Callbacks batch end.
batch_logs.update(_make_logs(model, batch_outs, mode))
callbacks._call_batch_hook(mode, 'end', batch_index,
batch_logs)
progbar.on_batch_end(batch_index, batch_logs)
if callbacks.model.stop_training:
break
aggregator.finalize()
results = aggregator.results
epoch_logs.update(_make_logs(model, results, mode))
if len(results) == 1:
results = results[0]
# Run the test loop every epoch during training.
if do_validation and not callbacks.model.stop_training:
val_results = model_iteration(model,
val_inputs,
targets=val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
steps_per_epoch=validation_steps,
callbacks=callbacks,
verbose=0,
mode='test')
if not isinstance(val_results, list):
val_results = [val_results]
epoch_logs.update(
_make_logs(model, val_results, mode, prefix='val_'))
callbacks.on_epoch_end(epoch, epoch_logs, mode=mode)
progbar.on_epoch_end(epoch, epoch_logs)
callbacks._call_end_hook(mode)
if mode == 'train':
return model.history
return results
def predict_loop(model, inputs, batch_size=32, verbose=0, steps=None):
"""Abstract method to loop over some data in batches.
Arguments:
model: Keras Model instance.
inputs: list of tensors to be fed to `f`.
batch_size: integer batch size.
verbose: verbosity mode.
steps: Total number of steps (batches of samples)
before declaring `_predict_loop` finished.
Ignored with the default value of `None`.
Returns:
Array of predictions (if the model has a single output)
or list of arrays of predictions
(if the model has multiple outputs).
"""
model._make_predict_function()
f = model.predict_function
if model.uses_learning_phase and not isinstance(K.learning_phase(), int):
ins = inputs + [0]
else:
ins = inputs
num_samples = training_utils.check_num_samples(inputs, batch_size, steps,
'steps')
if verbose == 1:
if steps is not None:
progbar = Progbar(target=steps)
else:
progbar = Progbar(target=num_samples)
indices_for_conversion_to_dense = []
for i in range(len(model._feed_inputs)):
if (issparse is not None and issparse(inputs[i])
and not K.is_sparse(model._feed_inputs[i])):
indices_for_conversion_to_dense.append(i)
if steps is not None:
# Step-based predictions.
# Since we do not know how many samples
# we will see, we cannot pre-allocate
# the returned Numpy arrays.
# Instead, we store one array per batch seen
# and concatenate them upon returning.
unconcatenated_outs = []
for step in range(steps):
batch_outs = f(ins)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if step == 0:
for batch_out in batch_outs:
unconcatenated_outs.append([])
for i, batch_out in enumerate(batch_outs):
unconcatenated_outs[i].append(batch_out)
if verbose == 1:
progbar.update(step + 1)
if len(unconcatenated_outs) == 1:
return np.concatenate(unconcatenated_outs[0], axis=0)
return [
np.concatenate(unconcatenated_outs[i], axis=0)
for i in range(len(unconcatenated_outs))
]
else:
# Sample-based predictions.
outs = []
batches = make_batches(num_samples, batch_size)
index_array = np.arange(num_samples)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
if ins and isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1], batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
batch_outs = f(ins_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if batch_index == 0:
# Pre-allocate the results arrays.
for batch_out in batch_outs:
shape = (num_samples, ) + batch_out.shape[1:]
outs.append(np.zeros(shape, dtype=batch_out.dtype))
for i, batch_out in enumerate(batch_outs):
outs[i][batch_start:batch_end] = batch_out
if verbose == 1:
progbar.update(batch_end)
if len(outs) == 1:
return outs[0]
return outs
def test_loop(model,
inputs,
targets,
sample_weights=None,
batch_size=None,
verbose=0,
steps=None):
"""Abstract method to loop over some data in batches.
Arguments:
model: Keras Model instance.
inputs: List of input arrays.
targets: List of target arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: integer batch size or `None`.
verbose: verbosity mode.
steps: Total number of steps (batches of samples)
before declaring predictions finished.
Ignored with the default value of `None`.
Returns:
Scalar loss (if the model has a single output and no metrics)
or list of scalars (if the model has multiple outputs
and/or metrics). The attribute `model.metrics_names` will give you
the display labels for the scalar outputs.
"""
model._make_test_function()
f = model.test_function
sample_weights = sample_weights or []
if model.uses_learning_phase and not isinstance(K.learning_phase(), int):
ins = inputs + targets + sample_weights + [0]
else:
ins = inputs + targets + sample_weights
if hasattr(model, 'metrics'):
for m in model.stateful_metric_functions:
m.reset_states()
stateful_metric_indices = [
i for i, name in enumerate(model.metrics_names)
if str(name) in model.stateful_metric_names
]
else:
stateful_metric_indices = []
num_samples = training_utils.check_num_samples(ins, batch_size, steps,
'steps')
outs = []
if verbose == 1:
if steps is not None:
progbar = Progbar(target=steps)
else:
progbar = Progbar(target=num_samples)
# To prevent a slowdown, we find beforehand the arrays that need conversion.
feed = model._feed_inputs + model._feed_targets + model._feed_sample_weights
indices_for_conversion_to_dense = []
for i in range(len(feed)):
if issparse is not None and issparse(
ins[i]) and not K.is_sparse(feed[i]):
indices_for_conversion_to_dense.append(i)
if steps is not None:
for step in range(steps):
batch_outs = f(ins)
if isinstance(batch_outs, list):
if step == 0:
for _ in enumerate(batch_outs):
outs.append(0.)
for i, batch_out in enumerate(batch_outs):
if i in stateful_metric_indices:
outs[i] = batch_out
else:
outs[i] += batch_out
else:
if step == 0:
outs.append(0.)
outs[0] += batch_outs
if verbose == 1:
progbar.update(step + 1)
for i in range(len(outs)):
if i not in stateful_metric_indices:
outs[i] /= steps
else:
batches = make_batches(num_samples, batch_size)
index_array = np.arange(num_samples)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
if isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1], batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
batch_outs = f(ins_batch)
if isinstance(batch_outs, list):
if batch_index == 0:
for batch_out in enumerate(batch_outs):
outs.append(0.)
for i, batch_out in enumerate(batch_outs):
if i in stateful_metric_indices:
outs[i] = batch_out
else:
outs[i] += batch_out * len(batch_ids)
else:
if batch_index == 0:
outs.append(0.)
outs[0] += batch_outs * len(batch_ids)
if verbose == 1:
progbar.update(batch_end)
for i in range(len(outs)):
if i not in stateful_metric_indices:
outs[i] /= num_samples
if len(outs) == 1:
return outs[0]
return outs
def fit_loop(model,
inputs,
targets,
sample_weights=None,
batch_size=None,
epochs=100,
verbose=1,
callbacks=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
shuffle=True,
initial_epoch=0,
steps_per_epoch=None,
validation_steps=None):
"""Abstract fit function for arrays of data.
Arguments:
model: Keras Model instance.
inputs: List of input arrays.
targets: List of target arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: Integer batch size or None if unknown.
epochs: Number of times to iterate over the data
verbose: Verbosity mode, 0, 1 or 2
callbacks: List of callbacks to be called during training
val_inputs: List of input arrays.
val_targets: List of target arrays.
val_sample_weights: Optional list of sample weight arrays.
shuffle: Whether to shuffle the data at the beginning of each epoch
concatenation of list the display names of the outputs of
`f` and the list of display names of the outputs of `f_val`.
initial_epoch: Epoch at which to start training
(useful for resuming a previous training run)
steps_per_epoch: Total number of steps (batches of samples)
before declaring one epoch finished and starting the
next epoch. Ignored with the default value of `None`.
validation_steps: Number of steps to run validation for
(only if doing validation from data tensors).
Ignored with the default value of `None`.
Returns:
`History` object.
Raises:
ValueError: in case of invalid arguments.
"""
model._make_train_function()
f = model.train_function
sample_weights = sample_weights or []
val_sample_weights = val_sample_weights or []
if model.uses_learning_phase and not isinstance(K.learning_phase(), int):
ins = inputs + targets + sample_weights + [1]
else:
ins = inputs + targets + sample_weights
do_validation = False
if val_inputs:
do_validation = True
if (steps_per_epoch is None and verbose and inputs and
hasattr(inputs[0], 'shape') and hasattr(val_inputs[0], 'shape')):
print('Train on %d samples, validate on %d samples' %
(inputs[0].shape[0], val_inputs[0].shape[0]))
if validation_steps:
do_validation = True
if steps_per_epoch is None:
raise ValueError('Can only use `validation_steps` '
'when doing step-wise '
'training, i.e. `steps_per_epoch` '
'must be set.')
num_train_samples = training_utils.check_num_samples(
ins, batch_size, steps_per_epoch, 'steps_per_epoch')
count_mode = 'steps' if steps_per_epoch else 'samples'
callbacks = cbks.configure_callbacks(
callbacks,
model,
do_validation=do_validation,
val_inputs=val_inputs,
val_targets=val_targets,
val_sample_weights=val_sample_weights,
batch_size=batch_size,
epochs=epochs,
steps_per_epoch=steps_per_epoch,
samples=num_train_samples,
validation_steps=validation_steps,
verbose=verbose,
count_mode=count_mode)
if num_train_samples is not None:
index_array = np.arange(num_train_samples)
# To prevent a slowdown, we find beforehand the arrays that need conversion.
feed = model._feed_inputs + model._feed_targets + model._feed_sample_weights
indices_for_conversion_to_dense = []
for i in range(len(feed)):
if issparse is not None and issparse(ins[i]) and not K.is_sparse(feed[i]):
indices_for_conversion_to_dense.append(i)
callbacks.on_train_begin()
for epoch in range(initial_epoch, epochs):
# Reset stateful metrics
for m in model.stateful_metric_functions:
m.reset_states()
# Update callbacks
callbacks.on_epoch_begin(epoch)
epoch_logs = {}
if steps_per_epoch is not None:
# Step-wise fit loop.
for step_index in range(steps_per_epoch):
batch_logs = {'batch': step_index, 'size': 1}
callbacks.on_batch_begin(step_index, batch_logs)
try:
outs = f(ins)
except errors.OutOfRangeError:
logging.warning('Your dataset iterator ran out of data; '
'interrupting training. Make sure that your dataset '
'can generate at least `steps_per_epoch * epochs` '
'batches (in this case, %d batches). You may need to'
'use the repeat() function when building your '
'dataset.' %
steps_per_epoch * epochs)
break
if not isinstance(outs, list):
outs = [outs]
for l, o in zip(model.metrics_names, outs):
batch_logs[l] = o
callbacks.on_batch_end(step_index, batch_logs)
if callbacks.model.stop_training:
break
if do_validation:
val_outs = test_loop(
model,
val_inputs,
val_targets,
sample_weights=val_sample_weights,
steps=validation_steps,
verbose=0)
if not isinstance(val_outs, list):
val_outs = [val_outs]
# Same labels assumed.
for l, o in zip(model.metrics_names, val_outs):
epoch_logs['val_' + l] = o
else:
# Sample-wise fit loop.
if shuffle == 'batch':
index_array = training_utils.batch_shuffle(index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = make_batches(num_train_samples, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
try:
if isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1], batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
except TypeError:
raise TypeError('TypeError while preparing batch. '
'If using HDF5 input data, '
'pass shuffle="batch".')
batch_logs = {}
batch_logs['batch'] = batch_index
batch_logs['size'] = len(batch_ids)
callbacks.on_batch_begin(batch_index, batch_logs)
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
outs = f(ins_batch)
if not isinstance(outs, list):
outs = [outs]
for l, o in zip(model.metrics_names, outs):
batch_logs[l] = o
callbacks.on_batch_end(batch_index, batch_logs)
if callbacks.model.stop_training:
break
if batch_index == len(batches) - 1: # Last batch.
if do_validation:
val_outs = test_loop(
model,
val_inputs,
val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
verbose=0)
if not isinstance(val_outs, list):
val_outs = [val_outs]
# Same labels assumed.
for l, o in zip(model.metrics_names, val_outs):
epoch_logs['val_' + l] = o
callbacks.on_epoch_end(epoch, epoch_logs)
if callbacks.model.stop_training:
break
callbacks.on_train_end()
return model.history
def model_iteration(model,
inputs,
targets=None,
sample_weights=None,
batch_size=None,
epochs=1,
verbose=1,
callbacks=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
shuffle=True,
initial_epoch=0,
steps_per_epoch=None,
validation_steps=None,
validation_freq=1,
mode=ModeKeys.TRAIN,
validation_in_fit=False,
prepared_feed_values_from_dataset=False,
steps_name='steps',
**kwargs):
"""Loop function for arrays of data with modes TRAIN/TEST/PREDICT.
Arguments:
model: Keras Model instance.
inputs: Either a list or dictionary of arrays, or a dataset instance.
targets: List/dictionary of input arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: Integer batch size or None if unknown.
epochs: Number of times to iterate over the data
verbose: Verbosity mode, 0, 1 or 2
callbacks: List of callbacks to be called during training
val_inputs: Either a list or dictionary of arrays, or a dataset instance.
val_targets: List/dictionary of target arrays.
val_sample_weights: Optional list of sample weight arrays.
shuffle: Whether to shuffle the data at the beginning of each epoch
concatenation of list the display names of the outputs of `f` and the
list of display names of the outputs of `f_val`.
initial_epoch: Epoch at which to start training (useful for resuming a
previous training run)
steps_per_epoch: Total number of steps (batches of samples) before
declaring one epoch finished and starting the next epoch. Ignored with
the default value of `None`.
validation_steps: Number of steps to run validation for (only if doing
validation from data tensors). Ignored with the default value of `None`.
validation_freq: Only relevant if validation data is provided. Integer or
`collections.Container` instance (e.g. list, tuple, etc.). If an
integer, specifies how many training epochs to run before a new
validation run is performed, e.g. `validation_freq=2` runs
validation every 2 epochs. If a Container, specifies the epochs on
which to run validation, e.g. `validation_freq=[1, 2, 10]` runs
validation at the end of the 1st, 2nd, and 10th epochs.
mode: One of ModeKeys.TRAIN/ModeKeys.TEST/ModeKeys.PREDICT.
validation_in_fit: if true, then this method is invoked from within
training iteration (for validation). In the case where `val_inputs` is a
dataset, this flag indicates that its iterator and feed values are
already created so should properly reuse resources.
prepared_feed_values_from_dataset: if True, `inputs` is a list of feed
tensors returned from `_prepare_feed_values` call on the validation
dataset, so do not call it again on `inputs`. Should only be used for
inline validation (i.e., only if `validation_in_fit` is also True).
steps_name: The string name of the steps argument, either `steps`,
`validation_steps`, or `steps_per_epoch`. Only used for error message
formatting.
**kwargs: Additional arguments for backwards compatibility.
Returns:
- In TRAIN mode: `History` object.
- In TEST mode: Evaluation metrics.
- In PREDICT mode: Outputs of the Model called on inputs.
Raises:
ValueError: in case of invalid arguments.
"""
# Backwards compatibility.
if 'steps' in kwargs:
steps_per_epoch = kwargs.pop('steps')
if kwargs:
raise TypeError('Unknown arguments: %s' % (kwargs,))
# In case we were passed a dataset, we extract symbolic tensors from it.
reset_dataset_after_each_epoch = False
input_iterator = None
is_dataset = isinstance(inputs,
(dataset_ops.DatasetV1, dataset_ops.DatasetV2))
# TODO(fchollet): consider moving `steps_per_epoch` inference to
# _standardize_user_data and set reset_dataset_after_each_epoch as an
# attribute on the dataset instance.
if is_dataset:
if steps_per_epoch is None:
reset_dataset_after_each_epoch = True
steps_per_epoch = training_utils.infer_steps_for_dataset(
inputs, steps_per_epoch, epochs=epochs, steps_name=steps_name)
input_iterator = _get_iterator(inputs, model._distribution_strategy)
if mode == ModeKeys.TRAIN:
_print_train_info(inputs, val_inputs, steps_per_epoch, verbose)
# Enter DistributionStrategy scope.
if model._distribution_strategy:
scope = distributed_training_utils.distributed_scope(
strategy=model._distribution_strategy,
learning_phase=(1 if mode == ModeKeys.TRAIN else 0))
scope.__enter__()
# Get step function and loop type.
f = _make_execution_function(model, mode)
use_steps = is_dataset or steps_per_epoch is not None
do_validation = val_inputs is not None
# Convert Eager Tensors to NumPy arrays to support batching/shuffling.
inputs, targets, sample_weights = training_utils. \
convert_eager_tensors_to_numpy((inputs, targets, sample_weights))
# Prepare input data.
inputs = input_iterator or inputs
if validation_in_fit and prepared_feed_values_from_dataset:
# When invoking validation in training loop, avoid creating iterator and
# list of feed values for the same validation dataset multiple times (which
# essentially would call `iterator.get_next()` that slows down execution and
# leads to OOM errors eventually.
ins = inputs
else:
ins = _prepare_feed_values(model, inputs, targets, sample_weights, mode)
if not is_dataset:
num_samples_or_steps = _get_num_samples_or_steps(ins, batch_size,
steps_per_epoch)
else:
num_samples_or_steps = steps_per_epoch
# Prepare validation data. Hold references to the iterator and the input list
# to properly reinitialize and reuse in multiple validation passes.
val_iterator = None
if isinstance(val_inputs, (dataset_ops.DatasetV1, dataset_ops.DatasetV2)):
if validation_steps is None:
# Because we pass an iterator feed instead of a Dataset to the eval
# model_iteration() call, it will not trigger the dataset-input path
# that determines the number of steps required. To avoid this issue,
# set validation_steps here if validation_steps is None.
validation_steps = training_utils.infer_steps_for_dataset(
val_inputs,
validation_steps,
epochs=epochs,
steps_name='validation_steps')
val_iterator = _get_iterator(val_inputs, model._distribution_strategy)
val_inputs = _prepare_feed_values(
model, val_iterator, val_targets, val_sample_weights, ModeKeys.TEST)
# Configure callbacks.
count_mode = 'steps' if use_steps else 'samples'
callbacks = cbks.configure_callbacks(
callbacks,
model,
do_validation=do_validation,
batch_size=batch_size,
epochs=epochs,
steps_per_epoch=steps_per_epoch,
samples=num_samples_or_steps,
verbose=0, # Handle ProgBarLogger separately in this loop.
mode=mode)
# TODO(omalleyt): Handle ProgBar as part of Callbacks once hooks are ready.
progbar = training_utils.get_progbar(model, count_mode)
progbar.params = callbacks.params
progbar.params['verbose'] = verbose
# Find beforehand arrays that need sparse-to-dense conversion.
if issparse is not None and not use_steps:
indices_for_conversion_to_dense = []
feed = _get_model_feed(model, mode)
for i, (input_data, feed_tensor) in enumerate(zip(ins, feed)):
if issparse(input_data) and not K.is_sparse(feed_tensor):
indices_for_conversion_to_dense.append(i)
# Select aggregation method.
if mode == ModeKeys.PREDICT:
aggregator = training_utils.OutputsAggregator(use_steps,
num_samples_or_steps)
else:
aggregator = training_utils.MetricsAggregator(use_steps,
num_samples_or_steps)
if model._compile_distribution:
distributed_training_utils._copy_weights_to_distributed_model(model, mode)
callbacks.model.stop_training = False
callbacks._call_begin_hook(mode)
progbar.on_train_begin()
for epoch in range(initial_epoch, epochs):
if callbacks.model.stop_training:
break
# Setup work for each epoch
epoch_logs = {}
model.reset_metrics()
if mode == ModeKeys.TRAIN:
callbacks.on_epoch_begin(epoch, epoch_logs)
progbar.on_epoch_begin(epoch, epoch_logs)
if use_steps:
# Step-wise loop.
if steps_per_epoch is None:
# Loop over dataset until `OutOfRangeError` is raised.
target_steps = np.inf
else:
# Loop over dataset for the specified number of steps.
target_steps = steps_per_epoch
step = 0
while step < target_steps:
batch_logs = {'batch': step, 'size': 1}
callbacks._call_batch_hook(mode, 'begin', step, batch_logs)
progbar.on_batch_begin(step, batch_logs)
# Get outputs.
try:
# `ins` can be callable in DistributionStrategy + eager case.
actual_inputs = ins() if callable(ins) else ins
batch_outs = f(actual_inputs)
except errors.OutOfRangeError:
if is_dataset:
# The dataset passed by the user ran out of batches.
# Now we know the cardinality of the dataset.
# If steps_per_epoch was specified, then running out of data is
# unexpected, so we stop training and inform the user.
if steps_per_epoch:
callbacks.model.stop_training = True
logging.warning(
'Your dataset ran out of data; interrupting training. '
'Make sure that your dataset can generate at least '
'`%s * epochs` batches (in this case, %d batches). '
'You may need to use the repeat() function when '
'building your dataset.'
% (steps_name, steps_per_epoch * epochs))
elif step > 0:
steps_per_epoch = step
aggregator.num_samples_or_steps = steps_per_epoch
if mode == ModeKeys.TRAIN:
progbar.params['steps'] = steps_per_epoch
progbar.progbar.target = steps_per_epoch
else:
# We ran out of batches while the user passed an iterator (legacy).
callbacks.model.stop_training = True
logging.warning(
'Your dataset iterator ran out of data; '
'interrupting training. Make sure that your iterator '
'can generate at least `%s * epochs` '
'batches (in this case, %d batches). You may need to'
'use the repeat() function when building your '
'dataset.' % (steps_name, steps_per_epoch * epochs))
break
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if model._distribution_strategy:
batch_outs = distributed_training_utils._per_device_aggregate_batch(
batch_outs, model, mode)
# Aggregate results.
if step == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs)
# Callbacks batch end.
batch_logs = cbks.make_logs(model, batch_logs, batch_outs, mode)
callbacks._call_batch_hook(mode, 'end', step, batch_logs)
progbar.on_batch_end(step, batch_logs)
step += 1
if callbacks.model.stop_training:
break
else:
# Sample-wise loop.
index_array = np.arange(num_samples_or_steps)
if shuffle == 'batch':
index_array = training_utils.batch_shuffle(index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = make_batches(num_samples_or_steps, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
# Slice into a batch.
try:
if ins and isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1], batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
except TypeError:
raise TypeError('TypeError while preparing batch. '
'If using HDF5 input data, '
'pass shuffle="batch".')
# Sparse to dense conversion.
if issparse is not None:
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
# Callbacks batch_begin.
batch_logs = {'batch': batch_index, 'size': len(batch_ids)}
callbacks._call_batch_hook(mode, 'begin', batch_index, batch_logs)
progbar.on_batch_begin(batch_index, batch_logs)
# Get outputs.
batch_outs = f(ins_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
# Aggregate results.
if batch_index == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs, batch_start, batch_end)
# Callbacks batch end.
batch_logs = cbks.make_logs(model, batch_logs, batch_outs, mode)
callbacks._call_batch_hook(mode, 'end', batch_index, batch_logs)
progbar.on_batch_end(batch_index, batch_logs)
if callbacks.model.stop_training:
break
aggregator.finalize()
results = aggregator.results
epoch_logs = cbks.make_logs(model, epoch_logs, results, mode)
if len(results) == 1:
results = results[0]
# Run the test loop every `validation_freq` epochs during training.
if (do_validation and
training_utils.should_run_validation(validation_freq, epoch) and
not callbacks.model.stop_training):
if model._compile_distribution:
# Since we create a new clone from the original model we need to copy
# the weights back to the original model before we can run validation.
distributed_training_utils._copy_weights_to_original_model(
model, ModeKeys.TRAIN)
val_results = model_iteration(
model,
val_inputs,
targets=val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
steps_per_epoch=validation_steps,
callbacks=callbacks,
verbose=0,
mode=ModeKeys.TEST,
validation_in_fit=True,
prepared_feed_values_from_dataset=(val_iterator is not None),
steps_name='validation_steps')
if not isinstance(val_results, list):
val_results = [val_results]
epoch_logs = cbks.make_logs(
model, epoch_logs, val_results, mode, prefix='val_')
if val_iterator and epoch < epochs - 1:
_reinitialize_iterator(val_iterator, model._distribution_strategy)
if mode == ModeKeys.TRAIN:
# Epochs only apply to `fit`.
callbacks.on_epoch_end(epoch, epoch_logs)
progbar.on_epoch_end(epoch, epoch_logs)
# Reinitialize dataset iterator for the next epoch.
if reset_dataset_after_each_epoch and epoch < epochs - 1:
_reinitialize_iterator(input_iterator, model._distribution_strategy)
callbacks._call_end_hook(mode)
if model._distribution_strategy:
if model._compile_distribution:
# TODO(priyag, psv): Copy back metrics to the original model as well?
distributed_training_utils._copy_weights_to_original_model(model, mode)
scope.__exit__(None, None, None)
if mode == ModeKeys.TRAIN:
return model.history
return results
def model_iteration(model,
inputs,
targets=None,
sample_weights=None,
batch_size=None,
epochs=1,
verbose=1,
callbacks=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
shuffle=True,
initial_epoch=0,
steps_per_epoch=None,
validation_steps=None,
validation_freq=1,
mode=ModeKeys.TRAIN,
validation_in_fit=False,
prepared_feed_values_from_dataset=False,
steps_name='steps',
**kwargs):
"""Loop function for arrays of data with modes TRAIN/TEST/PREDICT.
Arguments:
model: Keras Model instance.
inputs: Either a list or dictionary of arrays, or a dataset instance.
targets: List/dictionary of input arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: Integer batch size or None if unknown.
epochs: Number of times to iterate over the data
verbose: 0, 1, or 2. Verbosity mode.
0 = silent, 1 = progress bar, 2 = one line per epoch.
Note that the progress bar is not particularly useful when
logged to a file, so verbose=2 is recommended when not running
interactively (eg, in a production environment).
callbacks: List of callbacks to be called during training
val_inputs: Either a list or dictionary of arrays, or a dataset instance.
val_targets: List/dictionary of target arrays.
val_sample_weights: Optional list of sample weight arrays.
shuffle: Whether to shuffle the data at the beginning of each epoch
concatenation of list the display names of the outputs of `f` and the
list of display names of the outputs of `f_val`.
initial_epoch: Epoch at which to start training (useful for resuming a
previous training run)
steps_per_epoch: Total number of steps (batches of samples) before
declaring one epoch finished and starting the next epoch. Ignored with
the default value of `None`.
validation_steps: Number of steps to run validation for (only if doing
validation from data tensors). Ignored with the default value of
`None`.
validation_freq: Only relevant if validation data is provided. Integer or
`collections.Container` instance (e.g. list, tuple, etc.). If an
integer, specifies how many training epochs to run before a new
validation run is performed, e.g. `validation_freq=2` runs
validation every 2 epochs. If a Container, specifies the epochs on
which to run validation, e.g. `validation_freq=[1, 2, 10]` runs
validation at the end of the 1st, 2nd, and 10th epochs.
mode: One of ModeKeys.TRAIN/ModeKeys.TEST/ModeKeys.PREDICT.
validation_in_fit: if true, then this method is invoked from within
training iteration (for validation). In the case where `val_inputs` is
a dataset, this flag indicates that its iterator and feed values are
already created so should properly reuse resources.
prepared_feed_values_from_dataset: if True, `inputs` is a list of feed
tensors returned from `_prepare_feed_values` call on the validation
dataset, so do not call it again on `inputs`. Should only be used for
inline validation (i.e., only if `validation_in_fit` is also True).
steps_name: The string name of the steps argument, either `steps`,
`validation_steps`, or `steps_per_epoch`. Only used for error message
formatting.
**kwargs: Additional arguments for backwards compatibility.
Returns:
- In TRAIN mode: `History` object.
- In TEST mode: Evaluation metrics.
- In PREDICT mode: Outputs of the Model called on inputs.
Raises:
ValueError: in case of invalid arguments.
"""
# Backwards compatibility.
if 'steps' in kwargs:
steps_per_epoch = kwargs.pop('steps')
if kwargs:
raise TypeError('Unknown arguments: %s' % (kwargs, ))
# In case we were passed a dataset, we extract symbolic tensors from it.
reset_dataset_after_each_epoch = False
input_iterator = None
is_dataset = isinstance(inputs,
(dataset_ops.DatasetV1, dataset_ops.DatasetV2))
# TODO(fchollet): consider moving `steps_per_epoch` inference to
# _standardize_user_data and set reset_dataset_after_each_epoch as an
# attribute on the dataset instance.
if is_dataset:
if steps_per_epoch is None:
reset_dataset_after_each_epoch = True
steps_per_epoch = training_utils_v1.infer_steps_for_dataset(
model,
inputs,
steps_per_epoch,
epochs=epochs,
steps_name=steps_name)
input_iterator = _get_iterator(inputs, model._distribution_strategy)
# Enter tf.distribute.Strategy scope.
if model._distribution_strategy:
scope = distributed_training_utils_v1.distributed_scope(
strategy=model._distribution_strategy,
learning_phase=(1 if mode == ModeKeys.TRAIN else 0))
scope.__enter__()
use_steps = is_dataset or steps_per_epoch is not None
do_validation = val_inputs is not None
# Prepare input data.
inputs = input_iterator or inputs
if validation_in_fit and prepared_feed_values_from_dataset:
# When invoking validation in training loop, avoid creating iterator and
# list of feed values for the same validation dataset multiple times (which
# essentially would call `iterator.get_next()` that slows down execution and
# leads to OOM errors eventually.
ins = inputs
else:
ins = _prepare_feed_values(model, inputs, targets, sample_weights,
mode)
# `ins` is a function when a distribute strategy is used in Eager mode. In
# that case `is_dataset` is True. The code branches that have requirements
# about the type of `ins` do not trigger in the distributed case.
if not is_dataset:
num_samples_or_steps = _get_num_samples_or_steps(
ins, batch_size, steps_per_epoch)
else:
num_samples_or_steps = steps_per_epoch
# Update sample_weight_mode of the model if sample_weights is specified by the
# user. We need to call this function after we have a handle on the inputs
# (both numpy arrays and datasets) in order to determine if the user has
# specified sample_weights.
_update_sample_weight_mode(model, mode, ins)
# Get step function and loop type. As part of building the execution
# function we recompile the metrics based on the updated
# sample_weight_mode value.
f = _make_execution_function(model, mode)
# Prepare validation data. Hold references to the iterator and the input list
# to properly reinitialize and reuse in multiple validation passes.
val_iterator = None
if isinstance(val_inputs, (dataset_ops.DatasetV1, dataset_ops.DatasetV2)):
if validation_steps is None:
# Because we pass an iterator feed instead of a Dataset to the eval
# model_iteration() call, it will not trigger the dataset-input path
# that determines the number of steps required. To avoid this issue,
# set validation_steps here if validation_steps is None.
validation_steps = training_utils_v1.infer_steps_for_dataset(
model,
val_inputs,
validation_steps,
epochs=epochs,
steps_name='validation_steps')
val_iterator = _get_iterator(val_inputs, model._distribution_strategy)
val_inputs = _prepare_feed_values(model, val_iterator, val_targets,
val_sample_weights, ModeKeys.TEST)
# Get num steps for printing.
val_samples_or_steps = validation_steps
else:
# Get num samples for printing.
val_samples_or_steps = val_inputs and nest.flatten(
val_inputs)[0].shape[0] or None
if mode == ModeKeys.TRAIN and verbose:
_print_train_info(num_samples_or_steps, val_samples_or_steps,
is_dataset)
# Configure callbacks.
count_mode = 'steps' if use_steps else 'samples'
callbacks = cbks.configure_callbacks(callbacks,
model,
do_validation=do_validation,
batch_size=batch_size,
epochs=epochs,
steps_per_epoch=steps_per_epoch,
samples=num_samples_or_steps,
count_mode=count_mode,
verbose=verbose,
mode=mode)
# Find beforehand arrays that need sparse-to-dense conversion.
if issparse is not None and not use_steps:
indices_for_conversion_to_dense = []
feed = _get_model_feed(model, mode)
for i, (input_data, feed_tensor) in enumerate(zip(ins, feed)):
if issparse(input_data) and not K.is_sparse(feed_tensor):
indices_for_conversion_to_dense.append(i)
# Select aggregation method.
if mode == ModeKeys.PREDICT:
aggregator = training_utils_v1.OutputsAggregator(
use_steps,
num_samples=None if steps_per_epoch else num_samples_or_steps,
steps=steps_per_epoch)
else:
aggregator = training_utils_v1.MetricsAggregator(
use_steps,
num_samples=None if steps_per_epoch else num_samples_or_steps,
steps=steps_per_epoch)
if model._compile_distribution:
distributed_training_utils_v1._copy_weights_to_distributed_model(
model, mode)
callbacks.model.stop_training = False
callbacks._call_begin_hook(mode)
initial_epoch = model._maybe_load_initial_epoch_from_ckpt(
initial_epoch, mode)
for epoch in range(initial_epoch, epochs):
if callbacks.model.stop_training:
break
# Setup work for each epoch
epoch_logs = {}
if mode != ModeKeys.PREDICT:
# Collecting and resetting metrics has non-zero cost and will needlessly
# slow down model.predict.
model.reset_metrics()
if mode == ModeKeys.TRAIN:
callbacks.on_epoch_begin(epoch, epoch_logs)
if use_steps:
# Step-wise loop.
if steps_per_epoch is None:
# Loop over dataset until `OutOfRangeError` is raised.
target_steps = np.inf
else:
# Loop over dataset for the specified number of steps.
target_steps = steps_per_epoch
step = 0
while step < target_steps:
batch_logs = {'batch': step, 'size': 1}
callbacks._call_batch_hook(mode, 'begin', step, batch_logs)
# Get outputs.
try:
# `ins` can be callable in tf.distribute.Strategy + eager case.
if not callable(ins) or (
model._distribution_strategy
and not distributed_training_utils_v1.
is_distributing_by_cloning(model)):
actual_inputs = ins
else:
actual_inputs = ins()
batch_outs = f(actual_inputs)
except errors.OutOfRangeError:
if is_dataset:
# The dataset passed by the user ran out of batches.
# Now we know the cardinality of the dataset.
# If steps_per_epoch was specified, then running out of data is
# unexpected, so we stop training and inform the user.
if steps_per_epoch:
callbacks.model.stop_training = True
logging.warning(
'Your dataset ran out of data; interrupting training. '
'Make sure that your dataset can generate at least '
'`%s * epochs` batches (in this case, %d batches). '
'You may need to use the repeat() function when '
'building your dataset.' %
(steps_name, steps_per_epoch * epochs))
elif step > 0:
steps_per_epoch = step
aggregator.steps = steps_per_epoch
else:
# We ran out of batches while the user passed an iterator (legacy).
callbacks.model.stop_training = True
logging.warning(
'Your dataset iterator ran out of data; '
'interrupting training. Make sure that your iterator '
'can generate at least `%s * epochs` '
'batches (in this case, %d batches). You may need to'
'use the repeat() function when building your '
'dataset.' %
(steps_name, steps_per_epoch * epochs))
break
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if model._distribution_strategy:
batch_outs = (distributed_training_utils_v1.
_per_replica_aggregate_batch(
model._distribution_strategy, batch_outs,
model, mode))
# Aggregate results.
if step == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs)
# Callbacks batch end.
batch_logs = cbks.make_logs(model, batch_logs, batch_outs,
mode)
callbacks._call_batch_hook(mode, 'end', step, batch_logs)
step += 1
if callbacks.model.stop_training:
break
else:
# Sample-wise loop.
index_array = np.arange(num_samples_or_steps)
if shuffle == 'batch':
index_array = training_utils_v1.batch_shuffle(
index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = make_batches(num_samples_or_steps, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
# Slice into a batch.
if len(batches) == 1:
# If we only have one batch, do not slice. This takes care of
# composite tensors in non-Dataset modes; we currently don't support
# slicing them.
# TODO(b/133517906): Add slicing support.
ins_batch = ins
else:
try:
if ins and isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1],
batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
except TypeError:
raise TypeError('TypeError while preparing batch. '
'If using HDF5 input data, '
'pass shuffle="batch".')
# Sparse to dense conversion.
if issparse is not None:
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
# Callbacks batch_begin.
batch_logs = {'batch': batch_index, 'size': len(batch_ids)}
callbacks._call_batch_hook(mode, 'begin', batch_index,
batch_logs)
# Get outputs.
batch_outs = f(ins_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
# Aggregate results.
if batch_index == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs, batch_start, batch_end)
# Callbacks batch end.
batch_logs = cbks.make_logs(model, batch_logs, batch_outs,
mode)
callbacks._call_batch_hook(mode, 'end', batch_index,
batch_logs)
if callbacks.model.stop_training:
break
aggregator.finalize()
results = aggregator.results
epoch_logs = cbks.make_logs(model, epoch_logs, results, mode)
if len(results) == 1:
results = results[0]
# Run the test loop every `validation_freq` epochs during training.
if (do_validation and training_utils_v1.should_run_validation(
validation_freq, epoch) and not callbacks.model.stop_training):
if model._compile_distribution:
# Since we create a new clone from the original model we need to copy
# the weights back to the original model before we can run validation.
distributed_training_utils_v1._copy_weights_to_original_model(
model, ModeKeys.TRAIN)
val_results = model_iteration(
model,
val_inputs,
targets=val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
steps_per_epoch=validation_steps,
callbacks=callbacks,
verbose=0,
mode=ModeKeys.TEST,
validation_in_fit=True,
prepared_feed_values_from_dataset=(val_iterator is not None),
steps_name='validation_steps')
if not isinstance(val_results, list):
val_results = [val_results]
epoch_logs = cbks.make_logs(model,
epoch_logs,
val_results,
mode,
prefix='val_')
if val_iterator and epoch < epochs - 1:
_reinitialize_iterator(val_iterator,
model._distribution_strategy)
if mode == ModeKeys.TRAIN:
# Epochs only apply to `fit`.
callbacks.on_epoch_end(epoch, epoch_logs)
# Reinitialize dataset iterator for the next epoch.
if reset_dataset_after_each_epoch and epoch < epochs - 1:
_reinitialize_iterator(input_iterator,
model._distribution_strategy)
model._successful_loop_finish = True
callbacks._call_end_hook(mode)
if model._distribution_strategy:
if model._compile_distribution:
# TODO(priyag, psv): Copy back metrics to the original model as well?
distributed_training_utils_v1._copy_weights_to_original_model(
model, mode)
scope.__exit__(None, None, None)
if mode == ModeKeys.TRAIN:
return model.history
return results
def batch_fit_loop(model,
inputs,
targets,
epoch_logs,
index_array,
out_labels,
callback_model,
batch_size,
sample_weights=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
callbacks=None,
shuffle=True,
num_train_samples=None,
do_validation=False):
"""Fit function for eager execution when input is given as arrays or tensors.
Updates the given epoch logs.
Arguments:
model: Instance of the `Model`.
inputs: List of input arrays.
targets: List of target arrays.
epoch_logs: Dictionary of logs from every epoch.
index_array: Index array generated from number of training samples.
out_labels: Output labels generated from model metric names.
callback_model: Instance of `Model` to callback.
batch_size: Integer batch size or None if unknown.
sample_weights: Optional list of sample weight arrays.
val_inputs: Input data for validation.
val_targets: Target data for validation.
val_sample_weights: Sample weight data for validation.
callbacks: List of callbacks to be called during training.
shuffle: Whether to shuffle the data at the beginning of each epoch.
num_train_samples: Integer number of training samples.
do_validation: Boolean value indicating whether we should do validation.
"""
# TODO(psv): Create a dataset iterator instead of manually creating batches
# here and in batch_test_loop, batch_predict_loop.
if shuffle == 'batch':
index_array = model._batch_shuffle(index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = generic_utils.make_batches(num_train_samples, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
inputs_batch = slice_arrays(inputs, batch_ids, contiguous=not shuffle)
targets_batch = slice_arrays(targets,
batch_ids,
contiguous=not shuffle)
if sample_weights:
sample_weights_batch = slice_arrays(sample_weights,
batch_ids,
contiguous=not shuffle)
else:
sample_weights_batch = None
batch_logs = {}
batch_logs['batch'] = batch_index
batch_logs['size'] = len(batch_ids)
callbacks.on_batch_begin(batch_index, batch_logs)
inputs_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in inputs_batch
]
targets_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in targets_batch
]
if sample_weights:
sample_weights_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
if val is not None else None for val in sample_weights_batch
]
outs, loss, loss_metrics = _process_single_batch(
model,
inputs_batch,
targets_batch,
sample_weights=sample_weights_batch,
training=True)
if not isinstance(outs, list):
outs = [outs]
for l, o in zip(out_labels, outs):
batch_logs[l] = o
# Required for eager execution
metrics_results = _eager_metrics_fn(model, outs, targets_batch)
batch_logs['loss'] = tensor_util.constant_value(backend.mean(loss))
for k, v in zip(model.metrics_names,
[backend.mean(loss)] + loss_metrics + metrics_results):
batch_logs[k] = tensor_util.constant_value(v)
callbacks.on_batch_end(batch_index, batch_logs)
if callback_model.stop_training:
break
if batch_index == len(batches) - 1: # Last batch.
if do_validation:
val_outs = test_loop(model,
val_inputs,
val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
verbose=0)
if not isinstance(val_outs, list):
val_outs = [val_outs]
# Same labels assumed.
for l, o in zip(out_labels, val_outs):
epoch_logs['val_' + l] = o
def batch_test_loop(model,
inputs,
targets,
batch_size,
sample_weights=None,
verbose=0):
"""Test function for eager execution when input is given as arrays or tensors.
Arguments:
model: Model instance that is being evaluated in Eager mode.
inputs: List of input arrays.
targets: List of target arrays.
batch_size: Integer batch size.
sample_weights: Optional list of sample weight arrays.
verbose: Verbosity mode.
Returns:
Scalar loss (if the model has a single output and no metrics)
or list of scalars (if the model has multiple outputs
and/or metrics). The attribute `model.metrics_names` will give you
the display labels for the scalar outputs.
"""
outs = []
feed_data = inputs + targets
if sample_weights:
feed_data += sample_weights
num_samples = training_utils.check_num_samples(feed_data,
batch_size=batch_size)
if verbose == 1:
progbar = generic_utils.Progbar(target=num_samples)
batches = generic_utils.make_batches(num_samples, batch_size)
index_array = np.arange(num_samples)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
inputs_batch = slice_arrays(inputs, batch_ids)
targets_batch = slice_arrays(targets, batch_ids)
if sample_weights:
sample_weights_batch = slice_arrays(sample_weights, batch_ids)
else:
sample_weights_batch = None
inputs_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in inputs_batch
]
targets_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in targets_batch
]
if sample_weights:
sample_weights_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
if val is not None else None for val in sample_weights_batch
]
loss_outs, loss, loss_metrics = _model_loss(
model,
inputs_batch,
targets_batch,
sample_weights=sample_weights_batch,
training=False)
metrics_results = _eager_metrics_fn(model, loss_outs, targets_batch)
batch_outs = []
for _, v in zip(model.metrics_names,
[backend.mean(loss)] + loss_metrics + metrics_results):
batch_outs.append(tensor_util.constant_value(v))
if isinstance(batch_outs, list):
if batch_index == 0:
for _ in enumerate(batch_outs):
outs.append(0.)
for i, batch_out in enumerate(batch_outs):
outs[i] += batch_out * len(batch_ids)
else:
if batch_index == 0:
outs.append(0.)
outs[0] += batch_outs * len(batch_ids)
if verbose == 1:
progbar.update(batch_end)
for i in range(len(outs)):
outs[i] /= num_samples
if len(outs) == 1:
return outs[0]
return outs
def batch_test_loop(model,
inputs,
targets,
batch_size,
sample_weights=None,
verbose=0):
"""Test function for eager execution when input is given as arrays or tensors.
Arguments:
model: Model instance that is being evaluated in Eager mode.
inputs: List of input arrays.
targets: List of target arrays.
batch_size: Integer batch size.
sample_weights: Optional list of sample weight arrays.
verbose: Verbosity mode.
Returns:
Scalar loss (if the model has a single output and no metrics)
or list of scalars (if the model has multiple outputs
and/or metrics). The attribute `model.metrics_names` will give you
the display labels for the scalar outputs.
"""
outs = []
feed_data = inputs + targets
if sample_weights:
feed_data += sample_weights
num_samples = training_utils.check_num_samples(
feed_data, batch_size=batch_size)
if verbose == 1:
progbar = generic_utils.Progbar(target=num_samples)
batches = generic_utils.make_batches(num_samples, batch_size)
index_array = np.arange(num_samples)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
inputs_batch = slice_arrays(inputs, batch_ids)
targets_batch = slice_arrays(targets, batch_ids)
if sample_weights:
sample_weights_batch = slice_arrays(sample_weights, batch_ids)
else:
sample_weights_batch = None
inputs_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in inputs_batch
]
targets_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in targets_batch
]
if sample_weights:
sample_weights_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
if val is not None else None for val in sample_weights_batch
]
loss_outs, loss, loss_metrics = _model_loss(
model,
inputs_batch,
targets_batch,
sample_weights=sample_weights_batch,
training=False)
metrics_results = _eager_metrics_fn(model, loss_outs, targets_batch)
batch_outs = []
for _, v in zip(model.metrics_names,
[backend.mean(loss)] + loss_metrics + metrics_results):
batch_outs.append(tensor_util.constant_value(v))
if isinstance(batch_outs, list):
if batch_index == 0:
for _ in enumerate(batch_outs):
outs.append(0.)
for i, batch_out in enumerate(batch_outs):
outs[i] += batch_out * len(batch_ids)
else:
if batch_index == 0:
outs.append(0.)
outs[0] += batch_outs * len(batch_ids)
if verbose == 1:
progbar.update(batch_end)
for i in range(len(outs)):
outs[i] /= num_samples
if len(outs) == 1:
return outs[0]
return outs
def batch_fit_loop(model,
inputs,
targets,
epoch_logs,
index_array,
out_labels,
callback_model,
batch_size,
sample_weights=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
callbacks=None,
shuffle=True,
num_train_samples=None,
do_validation=False):
"""Fit function for eager execution when input is given as arrays or tensors.
Updates the given epoch logs.
Arguments:
model: Instance of the `Model`.
inputs: List of input arrays.
targets: List of target arrays.
epoch_logs: Dictionary of logs from every epoch.
index_array: Index array generated from number of training samples.
out_labels: Output labels generated from model metric names.
callback_model: Instance of `Model` to callback.
batch_size: Integer batch size or None if unknown.
sample_weights: Optional list of sample weight arrays.
val_inputs: Input data for validation.
val_targets: Target data for validation.
val_sample_weights: Sample weight data for validation.
callbacks: List of callbacks to be called during training.
shuffle: Whether to shuffle the data at the beginning of each epoch.
num_train_samples: Integer number of training samples.
do_validation: Boolean value indicating whether we should do validation.
"""
# TODO(psv): Create a dataset iterator instead of manually creating batches
# here and in batch_test_loop, batch_predict_loop.
if shuffle == 'batch':
index_array = model._batch_shuffle(index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = generic_utils.make_batches(num_train_samples, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
inputs_batch = slice_arrays(inputs, batch_ids, contiguous=not shuffle)
targets_batch = slice_arrays(targets, batch_ids, contiguous=not shuffle)
if sample_weights:
sample_weights_batch = slice_arrays(
sample_weights, batch_ids, contiguous=not shuffle)
else:
sample_weights_batch = None
batch_logs = {}
batch_logs['batch'] = batch_index
batch_logs['size'] = len(batch_ids)
callbacks.on_batch_begin(batch_index, batch_logs)
inputs_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in inputs_batch
]
targets_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
for val in targets_batch
]
if sample_weights:
sample_weights_batch = [
ops.convert_to_tensor(val, dtype=backend.floatx())
if val is not None else None for val in sample_weights_batch
]
outs, loss, loss_metrics = _process_single_batch(
model,
inputs_batch,
targets_batch,
sample_weights=sample_weights_batch,
training=True)
if not isinstance(outs, list):
outs = [outs]
for l, o in zip(out_labels, outs):
batch_logs[l] = o
# Required for eager execution
metrics_results = _eager_metrics_fn(model, outs, targets_batch)
batch_logs['loss'] = tensor_util.constant_value(backend.mean(loss))
for k, v in zip(model.metrics_names,
[backend.mean(loss)] + loss_metrics + metrics_results):
batch_logs[k] = tensor_util.constant_value(v)
callbacks.on_batch_end(batch_index, batch_logs)
if callback_model.stop_training:
break
if batch_index == len(batches) - 1: # Last batch.
if do_validation:
val_outs = test_loop(
model,
val_inputs,
val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
verbose=0)
if not isinstance(val_outs, list):
val_outs = [val_outs]
# Same labels assumed.
for l, o in zip(out_labels, val_outs):
epoch_logs['val_' + l] = o
def model_iteration(model,
inputs,
targets=None,
sample_weights=None,
batch_size=None,
epochs=1,
verbose=1,
callbacks=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
shuffle=True,
initial_epoch=0,
steps_per_epoch=None,
validation_steps=None,
validation_freq=1,
mode=ModeKeys.TRAIN,
validation_in_fit=False,
prepared_feed_values_from_dataset=False,
steps_name='steps',
**kwargs):
"""Loop function for arrays of data with modes TRAIN/TEST/PREDICT.
Arguments:
model: Keras Model instance.
inputs: Either a list or dictionary of arrays, or a dataset instance.
targets: List/dictionary of input arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: Integer batch size or None if unknown.
epochs: Number of times to iterate over the data
verbose: Verbosity mode, 0, 1 or 2
callbacks: List of callbacks to be called during training
val_inputs: Either a list or dictionary of arrays, or a dataset instance.
val_targets: List/dictionary of target arrays.
val_sample_weights: Optional list of sample weight arrays.
shuffle: Whether to shuffle the data at the beginning of each epoch
concatenation of list the display names of the outputs of `f` and the
list of display names of the outputs of `f_val`.
initial_epoch: Epoch at which to start training (useful for resuming a
previous training run)
steps_per_epoch: Total number of steps (batches of samples) before
declaring one epoch finished and starting the next epoch. Ignored with
the default value of `None`.
validation_steps: Number of steps to run validation for (only if doing
validation from data tensors). Ignored with the default value of `None`.
validation_freq: Only relevant if validation data is provided. Integer or
`collections.Container` instance (e.g. list, tuple, etc.). If an
integer, specifies how many training epochs to run before a new
validation run is performed, e.g. `validation_freq=2` runs
validation every 2 epochs. If a Container, specifies the epochs on
which to run validation, e.g. `validation_freq=[1, 2, 10]` runs
validation at the end of the 1st, 2nd, and 10th epochs.
mode: One of ModeKeys.TRAIN/ModeKeys.TEST/ModeKeys.PREDICT.
validation_in_fit: if true, then this method is invoked from within
training iteration (for validation). In the case where `val_inputs` is a
dataset, this flag indicates that its iterator and feed values are
already created so should properly reuse resources.
prepared_feed_values_from_dataset: if True, `inputs` is a list of feed
tensors returned from `_prepare_feed_values` call on the validation
dataset, so do not call it again on `inputs`. Should only be used for
inline validation (i.e., only if `validation_in_fit` is also True).
steps_name: The string name of the steps argument, either `steps`,
`validation_steps`, or `steps_per_epoch`. Only used for error message
formatting.
**kwargs: Additional arguments for backwards compatibility.
Returns:
- In TRAIN mode: `History` object.
- In TEST mode: Evaluation metrics.
- In PREDICT mode: Outputs of the Model called on inputs.
Raises:
ValueError: in case of invalid arguments.
"""
# Backwards compatibility.
if 'steps' in kwargs:
steps_per_epoch = kwargs.pop('steps')
if kwargs:
raise TypeError('Unknown arguments: %s' % (kwargs, ))
# In case we were passed a dataset, we extract symbolic tensors from it.
reset_dataset_after_each_epoch = False
input_iterator = None
is_dataset = isinstance(inputs,
(dataset_ops.DatasetV1, dataset_ops.DatasetV2))
# TODO(fchollet): consider moving `steps_per_epoch` inference to
# _standardize_user_data and set reset_dataset_after_each_epoch as an
# attribute on the dataset instance.
if is_dataset:
if steps_per_epoch is None:
reset_dataset_after_each_epoch = True
steps_per_epoch = training_utils.infer_steps_for_dataset(
inputs, steps_per_epoch, epochs=epochs, steps_name=steps_name)
input_iterator = _get_iterator(inputs, model._distribution_strategy)
if mode == ModeKeys.TRAIN:
_print_train_info(inputs, val_inputs, steps_per_epoch, verbose)
# Enter DistributionStrategy scope.
if model._distribution_strategy:
scope = model._distribution_strategy.scope()
scope.__enter__()
# Get step function and loop type.
f = _make_execution_function(model, mode)
use_steps = is_dataset or steps_per_epoch is not None
do_validation = val_inputs is not None
# Convert Eager Tensors to NumPy arrays to support batching/shuffling.
inputs, targets, sample_weights = training_utils. \
convert_eager_tensors_to_numpy((inputs, targets, sample_weights))
# Prepare input data.
inputs = input_iterator or inputs
if validation_in_fit and prepared_feed_values_from_dataset:
# When invoking validation in training loop, avoid creating iterator and
# list of feed values for the same validation dataset multiple times (which
# essentially would call `iterator.get_next()` that slows down execution and
# leads to OOM errors eventually.
ins = inputs
else:
ins = _prepare_feed_values(model, inputs, targets, sample_weights,
mode)
if not is_dataset:
num_samples_or_steps = _get_num_samples_or_steps(
ins, batch_size, steps_per_epoch)
else:
num_samples_or_steps = steps_per_epoch
# Prepare validation data. Hold references to the iterator and the input list
# to properly reinitialize and reuse in multiple validation passes.
val_iterator = None
if isinstance(val_inputs, (dataset_ops.DatasetV1, dataset_ops.DatasetV2)):
val_iterator = _get_iterator(val_inputs, model._distribution_strategy)
val_inputs = _prepare_feed_values(model, val_iterator, val_targets,
val_sample_weights, ModeKeys.TEST)
# Configure callbacks.
count_mode = 'steps' if use_steps else 'samples'
callbacks = cbks.configure_callbacks(
callbacks,
model,
do_validation=do_validation,
batch_size=batch_size,
epochs=epochs,
steps_per_epoch=steps_per_epoch,
samples=num_samples_or_steps,
verbose=0, # Handle ProgBarLogger separately in this loop.
mode=mode)
# TODO(omalleyt): Handle ProgBar as part of Callbacks once hooks are ready.
progbar = training_utils.get_progbar(model, count_mode)
progbar.params = callbacks.params
progbar.params['verbose'] = verbose
# Find beforehand arrays that need sparse-to-dense conversion.
if issparse is not None and not use_steps:
indices_for_conversion_to_dense = []
feed = _get_model_feed(model, mode)
for i, (input_data, feed_tensor) in enumerate(zip(ins, feed)):
if issparse(input_data) and not K.is_sparse(feed_tensor):
indices_for_conversion_to_dense.append(i)
# Select aggregation method.
if mode == ModeKeys.PREDICT:
aggregator = training_utils.OutputsAggregator(use_steps,
num_samples_or_steps)
else:
aggregator = training_utils.MetricsAggregator(use_steps,
num_samples_or_steps)
if model._compile_distribution and not validation_in_fit:
distributed_training_utils._copy_weights_to_distributed_model(
model, model._distributed_model)
callbacks.model.stop_training = False
callbacks._call_begin_hook(mode)
progbar.on_train_begin()
for epoch in range(initial_epoch, epochs):
if callbacks.model.stop_training:
break
# Setup work for each epoch
epoch_logs = {}
model.reset_metrics()
if mode == ModeKeys.TRAIN:
callbacks.on_epoch_begin(epoch, epoch_logs)
progbar.on_epoch_begin(epoch, epoch_logs)
if use_steps:
# Step-wise loop.
if steps_per_epoch is None:
# Loop over dataset until `OutOfRangeError` is raised.
target_steps = np.inf
else:
# Loop over dataset for the specified number of steps.
target_steps = steps_per_epoch
step = 0
while step < target_steps:
batch_logs = {'batch': step, 'size': 1}
callbacks._call_batch_hook(mode, 'begin', step, batch_logs)
progbar.on_batch_begin(step, batch_logs)
# Get outputs.
try:
# `ins` can be callable in DistributionStrategy + eager case.
actual_inputs = ins() if callable(ins) else ins
batch_outs = f(actual_inputs)
except errors.OutOfRangeError:
if not is_dataset:
# We ran out of batches while the user passed an iterator (legacy).
logging.warning(
'Your dataset iterator ran out of data; '
'interrupting training. Make sure that your iterator '
'can generate at least `%s * epochs` '
'batches (in this case, %d batches). You may need to'
'use the repeat() function when building your '
'dataset.' %
(steps_name, steps_per_epoch * epochs))
callbacks.model.stop_training = True
else:
# The dataset passed by the user ran out of batches.
# Now we know the cardinality of the dataset.
if step > 0:
steps_per_epoch = step
aggregator.num_samples_or_steps = steps_per_epoch
progbar.params['steps'] = steps_per_epoch
progbar.progbar.target = steps_per_epoch
break
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if model._distribution_strategy:
batch_outs = distributed_training_utils._per_device_aggregate_batch(
batch_outs, model, mode)
# Aggregate results.
if step == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs)
# Callbacks batch end.
batch_logs = cbks.make_logs(model, batch_logs, batch_outs,
mode)
callbacks._call_batch_hook(mode, 'end', step, batch_logs)
progbar.on_batch_end(step, batch_logs)
step += 1
if callbacks.model.stop_training:
break
else:
# Sample-wise loop.
index_array = np.arange(num_samples_or_steps)
if shuffle == 'batch':
index_array = training_utils.batch_shuffle(
index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = make_batches(num_samples_or_steps, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
# Slice into a batch.
try:
if ins and isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1],
batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
except TypeError:
raise TypeError('TypeError while preparing batch. '
'If using HDF5 input data, '
'pass shuffle="batch".')
# Sparse to dense conversion.
if issparse is not None:
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
# Callbacks batch_begin.
batch_logs = {'batch': batch_index, 'size': len(batch_ids)}
callbacks._call_batch_hook(mode, 'begin', batch_index,
batch_logs)
progbar.on_batch_begin(batch_index, batch_logs)
# Get outputs.
batch_outs = f(ins_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
# Aggregate results.
if batch_index == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs, batch_start, batch_end)
# Callbacks batch end.
batch_logs = cbks.make_logs(model, batch_logs, batch_outs,
mode)
callbacks._call_batch_hook(mode, 'end', batch_index,
batch_logs)
progbar.on_batch_end(batch_index, batch_logs)
if callbacks.model.stop_training:
break
aggregator.finalize()
results = aggregator.results
epoch_logs = cbks.make_logs(model, epoch_logs, results, mode)
if len(results) == 1:
results = results[0]
# Run the test loop every `validation_freq` epochs during training.
if (do_validation and training_utils.should_run_validation(
validation_freq, epoch) and not callbacks.model.stop_training):
val_results = model_iteration(
model,
val_inputs,
targets=val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
steps_per_epoch=validation_steps,
callbacks=callbacks,
verbose=0,
mode=ModeKeys.TEST,
validation_in_fit=True,
prepared_feed_values_from_dataset=(val_iterator is not None),
steps_name='validation_steps')
if not isinstance(val_results, list):
val_results = [val_results]
epoch_logs = cbks.make_logs(model,
epoch_logs,
val_results,
mode,
prefix='val_')
if val_iterator and epoch < epochs - 1:
_reinitialize_iterator(val_iterator,
model._distribution_strategy)
if mode == ModeKeys.TRAIN:
# Epochs only apply to `fit`.
callbacks.on_epoch_end(epoch, epoch_logs)
progbar.on_epoch_end(epoch, epoch_logs)
# Reinitialize dataset iterator for the next epoch.
if reset_dataset_after_each_epoch and epoch < epochs - 1:
_reinitialize_iterator(input_iterator,
model._distribution_strategy)
callbacks._call_end_hook(mode)
if model._distribution_strategy:
if model._compile_distribution and not validation_in_fit:
# TODO(priyag, psv): Copy back metrics to the original model as well?
distributed_training_utils._copy_weights_to_original_model(
model, model._distributed_model, mode)
scope.__exit__(None, None, None)
if mode == ModeKeys.TRAIN:
return model.history
return results
def model_iteration(model,
inputs,
targets=None,
sample_weights=None,
batch_size=None,
epochs=1,
verbose=1,
callbacks=None,
val_inputs=None,
val_targets=None,
val_sample_weights=None,
shuffle=True,
initial_epoch=0,
steps_per_epoch=None,
validation_steps=None,
mode=ModeKeys.TRAIN,
validation_in_fit=False,
**kwargs):
"""Loop function for arrays of data with modes TRAIN/TEST/PREDICT.
Arguments:
model: Keras Model instance.
inputs: Either a list of arrays or a dictionary.
targets: List of target arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: Integer batch size or None if unknown.
epochs: Number of times to iterate over the data
verbose: Verbosity mode, 0, 1 or 2
callbacks: List of callbacks to be called during training
val_inputs: List of input arrays.
val_targets: List of target arrays.
val_sample_weights: Optional list of sample weight arrays.
shuffle: Whether to shuffle the data at the beginning of each epoch
concatenation of list the display names of the outputs of `f` and the
list of display names of the outputs of `f_val`.
initial_epoch: Epoch at which to start training (useful for resuming a
previous training run)
steps_per_epoch: Total number of steps (batches of samples) before
declaring one epoch finished and starting the next epoch. Ignored with
the default value of `None`.
validation_steps: Number of steps to run validation for (only if doing
validation from data tensors). Ignored with the default value of `None`.
mode: One of ModeKeys.TRAIN/ModeKeys.TEST/ModeKeys.PREDICT.
validation_in_fit: DEPRECATED: if true, then this method is invoked from
within training iteration (for validation). In this case, do not copy
weights when using a tf.distribute.Strategy. The input is deprecated as
it is not required if the user creates a distributed model under the
distribution strategy scope rather than passing it to compile.
**kwargs: Additional arguments for backwards compatibility.
Returns:
- In TRAIN mode: `History` object.
- In TEST mode: Evaluation metrics.
- In PREDICT mode: Outputs of the Model called on inputs.
Raises:
ValueError: in case of invalid arguments.
"""
# Backwards compatibility.
if 'steps' in kwargs:
steps_per_epoch = kwargs['steps']
_validate_arguments(steps_per_epoch, validation_steps, kwargs)
if mode == ModeKeys.TRAIN:
_print_train_info(inputs, val_inputs, steps_per_epoch, verbose)
# Enter DistributionStrategy scope.
if model._distribution_strategy:
scope = model._distribution_strategy.scope()
scope.__enter__()
# Get step function and loop type.
f = _make_execution_function(model, mode)
use_steps = steps_per_epoch is not None
do_validation = val_inputs is not None
# Convert Eager Tensors to NumPy arrays to support batching/shuffling.
inputs, targets, sample_weights = training_utils. \
convert_eager_tensors_to_numpy((inputs, targets, sample_weights))
# Prepare input data.
ins = _prepare_feed_values(model, inputs, targets, sample_weights, mode)
num_samples_or_steps = _get_num_samples_or_steps(ins, batch_size,
steps_per_epoch)
# Configure callbacks.
count_mode = 'steps' if use_steps else 'samples'
callbacks = cbks.configure_callbacks(
callbacks,
model,
do_validation=do_validation,
batch_size=batch_size,
epochs=epochs,
steps_per_epoch=steps_per_epoch,
samples=num_samples_or_steps,
verbose=0, # Handle ProgBarLogger separately in this loop.
mode=mode)
# TODO(omalleyt): Handle ProgBar as part of Callbacks once hooks are ready.
progbar = training_utils.get_progbar(model, count_mode)
progbar.params = callbacks.params
progbar.params['verbose'] = verbose
# Find beforehand arrays that need sparse-to-dense conversion.
if issparse is not None and not use_steps:
indices_for_conversion_to_dense = []
feed = _get_model_feed(model, mode)
for i, (input_data, feed_tensor) in enumerate(zip(ins, feed)):
if issparse(input_data) and not K.is_sparse(feed_tensor):
indices_for_conversion_to_dense.append(i)
# Select aggregation method.
if mode == ModeKeys.PREDICT:
aggregator = training_utils.OutputsAggregator(use_steps,
num_samples_or_steps)
else:
aggregator = training_utils.MetricsAggregator(use_steps,
num_samples_or_steps)
if model._compile_distribution and not validation_in_fit:
distributed_training_utils._copy_weights_to_distributed_model(
model, model._distributed_model)
callbacks.model.stop_training = False
callbacks._call_begin_hook(mode)
progbar.on_train_begin()
for epoch in range(initial_epoch, epochs):
if callbacks.model.stop_training:
break
# Setup work for each epoch
epoch_logs = {}
model.reset_metrics()
if mode == ModeKeys.TRAIN:
callbacks.on_epoch_begin(epoch, epoch_logs)
progbar.on_epoch_begin(epoch, epoch_logs)
if use_steps:
# Step-wise loop.
for step in range(steps_per_epoch):
batch_logs = {'batch': step, 'size': 1}
callbacks._call_batch_hook(mode, 'begin', step, batch_logs)
progbar.on_batch_begin(step, batch_logs)
# Get outputs.
try:
# `ins` can be callable in DistributionStrategy + eager case.
actual_inputs = ins() if callable(ins) else ins
batch_outs = f(actual_inputs)
except errors.OutOfRangeError:
logging.warning('Your dataset iterator ran out of data; '
'interrupting training. Make sure that your dataset '
'can generate at least `steps_per_epoch * epochs` '
'batches (in this case, %d batches). You may need to'
'use the repeat() function when building your '
'dataset.' % steps_per_epoch * epochs)
break
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if model._distribution_strategy:
batch_outs = distributed_training_utils._per_device_aggregate_batch(
batch_outs, model, mode)
# Aggregate results.
if step == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs)
# Callbacks batch end.
batch_logs = cbks.make_logs(model, batch_logs, batch_outs, mode)
callbacks._call_batch_hook(mode, 'end', step, batch_logs)
progbar.on_batch_end(step, batch_logs)
if callbacks.model.stop_training:
break
else:
# Sample-wise loop.
index_array = np.arange(num_samples_or_steps)
if shuffle == 'batch':
index_array = training_utils.batch_shuffle(index_array, batch_size)
elif shuffle:
np.random.shuffle(index_array)
batches = make_batches(num_samples_or_steps, batch_size)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
# Slice into a batch.
try:
if ins and isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1], batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
except TypeError:
raise TypeError('TypeError while preparing batch. '
'If using HDF5 input data, '
'pass shuffle="batch".')
# Sparse to dense conversion.
if issparse is not None:
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
# Callbacks batch_begin.
batch_logs = {'batch': batch_index, 'size': len(batch_ids)}
callbacks._call_batch_hook(mode, 'begin', batch_index, batch_logs)
progbar.on_batch_begin(batch_index, batch_logs)
# Get outputs.
batch_outs = f(ins_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
# Aggregate results.
if batch_index == 0:
aggregator.create(batch_outs)
aggregator.aggregate(batch_outs, batch_start, batch_end)
# Callbacks batch end.
batch_logs = cbks.make_logs(model, batch_logs, batch_outs, mode)
callbacks._call_batch_hook(mode, 'end', batch_index, batch_logs)
progbar.on_batch_end(batch_index, batch_logs)
if callbacks.model.stop_training:
break
aggregator.finalize()
results = aggregator.results
epoch_logs = cbks.make_logs(model, epoch_logs, results, mode)
if len(results) == 1:
results = results[0]
# Run the test loop every epoch during training.
if do_validation and not callbacks.model.stop_training:
val_results = model_iteration(
model,
val_inputs,
targets=val_targets,
sample_weights=val_sample_weights,
batch_size=batch_size,
steps_per_epoch=validation_steps,
callbacks=callbacks,
verbose=0,
mode=ModeKeys.TEST,
validation_in_fit=True)
if not isinstance(val_results, list):
val_results = [val_results]
epoch_logs = cbks.make_logs(
model, epoch_logs, val_results, mode, prefix='val_')
if mode == ModeKeys.TRAIN:
# Epochs only apply to `fit`.
callbacks.on_epoch_end(epoch, epoch_logs)
progbar.on_epoch_end(epoch, epoch_logs)
callbacks._call_end_hook(mode)
if model._distribution_strategy:
if model._compile_distribution and not validation_in_fit:
# TODO(priyag, psv): Copy back metrics to the original model as well?
distributed_training_utils._copy_weights_to_original_model(
model, model._distributed_model, mode)
scope.__exit__(None, None, None)
if mode == ModeKeys.TRAIN:
return model.history
return results
def test_loop(model,
inputs,
targets,
sample_weights=None,
batch_size=None,
verbose=0,
steps=None):
"""Abstract method to loop over some data in batches.
Arguments:
model: Keras Model instance.
inputs: List of input arrays.
targets: List of target arrays.
sample_weights: Optional list of sample weight arrays.
batch_size: integer batch size or `None`.
verbose: verbosity mode.
steps: Total number of steps (batches of samples)
before declaring predictions finished.
Ignored with the default value of `None`.
Returns:
Scalar loss (if the model has a single output and no metrics)
or list of scalars (if the model has multiple outputs
and/or metrics). The attribute `model.metrics_names` will give you
the display labels for the scalar outputs.
"""
model._make_test_function()
f = model.test_function
sample_weights = sample_weights or []
if model.uses_learning_phase and not isinstance(K.learning_phase(), int):
ins = inputs + targets + sample_weights + [0]
else:
ins = inputs + targets + sample_weights
if hasattr(model, 'metrics'):
for m in model.stateful_metric_functions:
m.reset_states()
stateful_metric_indices = [
i for i, name in enumerate(model.metrics_names)
if str(name) in model.stateful_metric_names
]
else:
stateful_metric_indices = []
num_samples = training_utils.check_num_samples(
ins, batch_size, steps, 'steps')
outs = []
if verbose == 1:
if steps is not None:
progbar = Progbar(target=steps)
else:
progbar = Progbar(target=num_samples)
# To prevent a slowdown, we find beforehand the arrays that need conversion.
feed = model._feed_inputs + model._feed_targets + model._feed_sample_weights
indices_for_conversion_to_dense = []
for i in range(len(feed)):
if issparse is not None and issparse(ins[i]) and not K.is_sparse(feed[i]):
indices_for_conversion_to_dense.append(i)
if steps is not None:
for step in range(steps):
batch_outs = f(ins)
if isinstance(batch_outs, list):
if step == 0:
for _ in enumerate(batch_outs):
outs.append(0.)
for i, batch_out in enumerate(batch_outs):
if i in stateful_metric_indices:
outs[i] = batch_out
else:
outs[i] += batch_out
else:
if step == 0:
outs.append(0.)
outs[0] += batch_outs
if verbose == 1:
progbar.update(step + 1)
for i in range(len(outs)):
if i not in stateful_metric_indices:
outs[i] /= steps
else:
batches = make_batches(num_samples, batch_size)
index_array = np.arange(num_samples)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
if isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1], batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
batch_outs = f(ins_batch)
if isinstance(batch_outs, list):
if batch_index == 0:
outs.extend([0.] * len(batch_outs))
for i, batch_out in enumerate(batch_outs):
if i in stateful_metric_indices:
outs[i] = batch_out
else:
outs[i] += batch_out * len(batch_ids)
else:
if batch_index == 0:
outs.append(0.)
outs[0] += batch_outs * len(batch_ids)
if verbose == 1:
progbar.update(batch_end)
for i in range(len(outs)):
if i not in stateful_metric_indices:
outs[i] /= num_samples
if len(outs) == 1:
return outs[0]
return outs
for batch_out in batch_outs:
unconcatenated_outs.append([])
for i, batch_out in enumerate(batch_outs):
unconcatenated_outs[i].append(batch_out)
if verbose == 1:
progbar.update(step + 1)
if len(unconcatenated_outs) == 1:
return np.concatenate(unconcatenated_outs[0], axis=0)
return [
np.concatenate(unconcatenated_outs[i], axis=0)
for i in range(len(unconcatenated_outs))
]
else:
# Sample-based predictions.
outs = []
batches = make_batches(num_samples, batch_size)
index_array = np.arange(num_samples)
for batch_index, (batch_start, batch_end) in enumerate(batches):
batch_ids = index_array[batch_start:batch_end]
if ins and isinstance(ins[-1], int):
# Do not slice the training phase flag.
ins_batch = slice_arrays(ins[:-1], batch_ids) + [ins[-1]]
else:
ins_batch = slice_arrays(ins, batch_ids)
for i in indices_for_conversion_to_dense:
ins_batch[i] = ins_batch[i].toarray()
batch_outs = f(ins_batch)
if not isinstance(batch_outs, list):
batch_outs = [batch_outs]
if batch_index == 0:
