def _sync(self):
logger.info("Updating weights ...")
dic = {v.name: v.eval() for v in self.vars}
self.shared_dic['params'] = dic
self.condvar.acquire()
self.condvar.notify_all()
self.condvar.release()
def __init__(self,
predictor_io_names,
player,
state_shape,
batch_size,
memory_size, init_memory_size,
exploration, end_exploration, exploration_epoch_anneal,
update_frequency, history_len):
"""
Args:
predictor_io_names (tuple of list of str): input/output names to
predict Q value from state.
player (RLEnvironment): the player.
history_len (int): length of history frames to concat. Zero-filled
initial frames.
update_frequency (int): number of new transitions to add to memory
after sampling a batch of transitions for training.
"""
init_memory_size = int(init_memory_size)
for k, v in locals().items():
if k != 'self':
setattr(self, k, v)
self.num_actions = player.get_action_space().num_actions()
logger.info("Number of Legal actions: {}".format(self.num_actions))
self.rng = get_rng(self)
self._init_memory_flag = threading.Event() # tell if memory has been initialized
# TODO just use a semaphore?
# a queue to receive notifications to populate memory
self._populate_job_queue = queue.Queue(maxsize=5)
self.mem = ReplayMemory(memory_size, state_shape, history_len)
def get_config(model, nr_tower):
batch = TOTAL_BATCH_SIZE // nr_tower
logger.info("Running on {} towers. Batch size per tower: {}".format(nr_tower, batch))
dataset_train = get_data('train', batch)
dataset_val = get_data('val', batch)
step_size = 1280000 // TOTAL_BATCH_SIZE
max_iter = 3 * 10**5
max_epoch = (max_iter // step_size) + 1
callbacks = [
ModelSaver(),
ScheduledHyperParamSetter('learning_rate',
[(0, 0.5), (max_iter, 0)],
interp='linear', step_based=True),
]
infs = [ClassificationError('wrong-top1', 'val-error-top1'),
ClassificationError('wrong-top5', 'val-error-top5')]
if nr_tower == 1:
# single-GPU inference with queue prefetch
callbacks.append(InferenceRunner(QueueInput(dataset_val), infs))
else:
# multi-GPU inference (with mandatory queue prefetch)
callbacks.append(DataParallelInferenceRunner(
dataset_val, infs, list(range(nr_tower))))
return TrainConfig(
model=model,
dataflow=dataset_train,
callbacks=callbacks,
steps_per_epoch=step_size,
max_epoch=max_epoch,
)
def _init_memory(self):
logger.info("Populating replay memory with epsilon={} ...".format(self.exploration))
with get_tqdm(total=self.init_memory_size) as pbar:
while len(self.mem) < self.init_memory_size:
self._populate_exp()
pbar.update()
self._init_memory_flag.set()
def eval_model_multithread(pred, nr_eval, get_player_fn):
"""
Args:
pred (OfflinePredictor): state -> Qvalue
"""
NR_PROC = min(multiprocessing.cpu_count() // 2, 8)
with pred.sess.as_default():
mean, max = eval_with_funcs([pred] * NR_PROC, nr_eval, get_player_fn)
logger.info("Average Score: {}; Max Score: {}".format(mean, max))
def __init__(self, dirname, label='phoneme'):
self.dirname = dirname
assert os.path.isdir(dirname), dirname
self.filelists = [k for k in fs.recursive_walk(self.dirname)
if k.endswith('.wav')]
logger.info("Found {} wav files ...".format(len(self.filelists)))
assert len(self.filelists), "Found no '.wav' files!"
assert label in ['phoneme', 'letter'], label
self.label = label
def compute_mean_std(db, fname):
ds = LMDBSerializer.load(db, shuffle=False)
ds.reset_state()
o = OnlineMoments()
for dp in get_tqdm(ds):
feat = dp[0] # len x dim
for f in feat:
o.feed(f)
logger.info("Writing to {} ...".format(fname))
with open(fname, 'wb') as f:
f.write(serialize.dumps([o.mean, o.std]))
def update_target_param():
vars = tf.global_variables()
ops = []
G = tf.get_default_graph()
for v in vars:
target_name = v.op.name
if target_name.startswith('target'):
new_name = target_name.replace('target/', '')
logger.info("{} <- {}".format(target_name, new_name))
ops.append(v.assign(G.get_tensor_by_name(new_name + ':0')))
return tf.group(*ops, name='update_target_network')
def eval_with_funcs(predictors, nr_eval, get_player_fn, verbose=False):
"""
Args:
predictors ([PredictorBase])
"""
class Worker(StoppableThread, ShareSessionThread):
def __init__(self, func, queue):
super(Worker, self).__init__()
self._func = func
self.q = queue
def func(self, *args, **kwargs):
if self.stopped():
raise RuntimeError("stopped!")
return self._func(*args, **kwargs)
def run(self):
with self.default_sess():
player = get_player_fn(train=False)
while not self.stopped():
try:
score = play_one_episode(player, self.func)
except RuntimeError:
return
self.queue_put_stoppable(self.q, score)
q = queue.Queue()
threads = [Worker(f, q) for f in predictors]
for k in threads:
k.start()
time.sleep(0.1) # avoid simulator bugs
stat = StatCounter()
def fetch():
r = q.get()
stat.feed(r)
if verbose:
logger.info("Score: {}".format(r))
for _ in tqdm(range(nr_eval), **get_tqdm_kwargs()):
fetch()
# waiting is necessary, otherwise the estimated mean score is biased
logger.info("Waiting for all the workers to finish the last run...")
for k in threads:
k.stop()
for k in threads:
k.join()
while q.qsize():
fetch()
if stat.count > 0:
return (stat.average, stat.max)
return (0, 0)
def convert_param_name(param):
resnet_param = {}
for k, v in six.iteritems(param):
try:
newname = name_conversion(k)
except Exception:
logger.error("Exception when processing caffe layer {}".format(k))
raise
logger.info("Name Transform: " + k + ' --> ' + newname)
resnet_param[newname] = v
return resnet_param
def run(self):
self.clients = defaultdict(self.ClientState)
try:
while True:
msg = loads(self.c2s_socket.recv(copy=False).bytes)
ident, state, reward, isOver = msg
client = self.clients[ident]
if client.ident is None:
client.ident = ident
# maybe check history and warn about dead client?
self._process_msg(client, state, reward, isOver)
except zmq.ContextTerminated:
logger.info("[Simulator] Context was terminated.")
def compute_mean_std(db, fname):
ds = LMDBDataPoint(db, shuffle=False)
ds.reset_state()
o = OnlineMoments()
with get_tqdm(total=ds.size()) as bar:
for dp in ds.get_data():
feat = dp[0] # len x dim
for f in feat:
o.feed(f)
bar.update()
logger.info("Writing to {} ...".format(fname))
with open(fname, 'wb') as f:
f.write(serialize.dumps([o.mean, o.std]))
def _trigger_epoch(self):
if self.exploration > self.end_exploration:
self.exploration -= self.exploration_epoch_anneal
logger.info("Exploration changed to {}".format(self.exploration))
# log player statistics
stats = self.player.stats
for k, v in six.iteritems(stats):
try:
mean, max = np.mean(v), np.max(v)
self.trainer.add_scalar_summary('expreplay/mean_' + k, mean)
self.trainer.add_scalar_summary('expreplay/max_' + k, max)
except:
pass
self.player.reset_stat()
def print_class_histogram(self, imgs):
nr_class = len(COCOMeta.class_names)
hist_bins = np.arange(nr_class + 1)
# Histogram of ground-truth objects
gt_hist = np.zeros((nr_class,), dtype=np.int)
for entry in imgs:
# filter crowd?
gt_inds = np.where(
(entry['class'] > 0) & (entry['is_crowd'] == 0))[0]
gt_classes = entry['class'][gt_inds]
gt_hist += np.histogram(gt_classes, bins=hist_bins)[0]
data = [[COCOMeta.class_names[i], v] for i, v in enumerate(gt_hist)]
data.append(['total', sum([x[1] for x in data])])
table = tabulate(data, headers=['class', '#box'], tablefmt='pipe')
logger.info("Ground-Truth Boxes:\n" + colored(table, 'cyan'))
def texture_loss(x, p=16):
_, h, w, c = x.get_shape().as_list()
x = normalize(x)
assert h % p == 0 and w % p == 0
logger.info('Create texture loss for layer {} with shape {}'.format(x.name, x.get_shape()))
x = tf.space_to_batch_nd(x, [p, p], [[0, 0], [0, 0]]) # [b * ?, h/p, w/p, c]
x = tf.reshape(x, [p, p, -1, h // p, w // p, c]) # [p, p, b, h/p, w/p, c]
x = tf.transpose(x, [2, 3, 4, 0, 1, 5]) # [b * ?, p, p, c]
patches_a, _, patches_b = tf.split(x, 3, axis=0) # each is b,h/p,w/p,p,p,c; split to render, _image, style
patches_a = tf.reshape(patches_a, [-1, p, p, c]) # [b * ?, p, p, c]
patches_b = tf.reshape(patches_b, [-1, p, p, c]) # [b * ?, p, p, c]
return tf.losses.mean_squared_error(
gram_matrix(patches_a),
gram_matrix(patches_b),
reduction=tf.losses.Reduction.MEAN
)
def _parameter_net(self, theta, kernel_shape=9):
"""Estimate filters for convolution layers
Args:
theta: angle of filter
kernel_shape: size of each filter
Returns:
learned filter as [B, k, k, 1]
"""
with argscope(FullyConnected, nl=tf.nn.leaky_relu):
net = FullyConnected('fc1', theta, 64)
net = FullyConnected('fc2', net, 128)
pred_filter = FullyConnected('fc3', net, kernel_shape ** 2, nl=tf.identity)
pred_filter = tf.reshape(pred_filter, [BATCH, kernel_shape, kernel_shape, 1], name="pred_filter")
logger.info('Parameter net output: {}'.format(pred_filter.get_shape().as_list()))
return pred_filter
def _parameter_net(self, theta, kernel_shape=9):
"""Estimate filters for convolution layers
Args:
theta: angle of filter
kernel_shape: size of each filter
Returns:
learned filter as [B, k, k, 1]
"""
with argscope(FullyConnected, nl=tf.nn.leaky_relu):
net = FullyConnected('fc1', theta, 64)
net = FullyConnected('fc2', net, 128)
pred_filter = FullyConnected('fc3', net, kernel_shape ** 2, nl=tf.identity)
pred_filter = tf.reshape(pred_filter, [BATCH, kernel_shape, kernel_shape, 1], name="pred_filter")
logger.info('Parameter net output: {}'.format(pred_filter.get_shape().as_list()))
return pred_filter
def texture_loss(x, p=16):
_, h, w, c = x.get_shape().as_list()
x = normalize(x)
assert h % p == 0 and w % p == 0
logger.info('Create texture loss for layer {} with shape {}'.format(x.name, x.get_shape()))
x = tf.space_to_batch_nd(x, [p, p], [[0, 0], [0, 0]]) # [b * ?, h/p, w/p, c]
x = tf.reshape(x, [p, p, -1, h // p, w // p, c]) # [p, p, b, h/p, w/p, c]
x = tf.transpose(x, [2, 3, 4, 0, 1, 5]) # [b * ?, p, p, c]
patches_a, patches_b = tf.split(x, 2, axis=0) # each is b,h/p,w/p,p,p,c
patches_a = tf.reshape(patches_a, [-1, p, p, c]) # [b * ?, p, p, c]
patches_b = tf.reshape(patches_b, [-1, p, p, c]) # [b * ?, p, p, c]
return tf.losses.mean_squared_error(
gram_matrix(patches_a),
gram_matrix(patches_b),
reduction=Reduction.MEAN
)
def __init__(self, predictor_io_names, predictor_refine_io_names, env,
state_shape, batch_size, memory_size, init_memory_size,
init_exploration, update_frequency):
"""
Args:
predictor_io_names (tuple of list of str): input/output names to
predict Q value from state.
player (RLEnvironment): the player.
history_len (int): length of history frames to concat. Zero-filled
initial frames.
update_frequency (int): number of new transitions to add to memory
after sampling a batch of transitions for training.
"""
init_memory_size = int(init_memory_size)
items = locals().items()
for k, v in items:
if k != 'self':
setattr(self, k, v)
self.exploration = init_exploration
self.env = env
self.rng = get_rng(self)
# print('RNG------------------------------------------', self.rng.randint(10))
self._init_memory_flag = threading.Event(
) # tell if memory has been initialized
# a queue to receive notifications to populate memory
self._populate_job_queue = queue.Queue(maxsize=5)
self.mem = ReplayMemory(memory_size, state_shape)
self.mem_refine = ReplayMemoryRefine(memory_size, state_shape)
self.env.reset()
self._current_ob, self._current_history = self.env.focus_image, self.env.history
# stage 1 ar actions
self._action_space = self.env.action_space
# stage 2 actions
self._action_space_refine = self.env.action_space_refine
logger.info(
"Number of Legal actions: stage-1-ar {}, stage-2 {}".format(
len(self._action_space), len(self._action_space_refine)))
self._player_scores = StatCounter()
self._current_game_score = StatCounter()
self.state_shape = state_shape
def get_train_dataflow():
"""
Return a training dataflow. Each datapoint consists of the following:
An image: (h, w, 3),
1 or more pairs of (anchor_labels, anchor_boxes):
anchor_labels: (h', w', NA)
anchor_boxes: (h', w', NA, 4)
gt_boxes: (N, 4)
gt_labels: (N,)
If MODE_MASK, gt_masks: (N, h, w)
"""
roidbs = list(itertools.chain.from_iterable(DatasetRegistry.get(x).training_roidbs() for x in cfg.DATA.TRAIN))
print_class_histogram(roidbs)
# Valid training images should have at least one fg box.
# But this filter shall not be applied for testing.
num = len(roidbs)
roidbs = list(filter(lambda img: len(img["boxes"][img["is_crowd"] == 0]) > 0, roidbs))
logger.info(
"Filtered {} images which contain no non-crowd groudtruth boxes. Total #images for training: {}".format(
num - len(roidbs), len(roidbs)
)
)
ds = DataFromList(roidbs, shuffle=True)
preprocess = TrainingDataPreprocessor(cfg)
if cfg.DATA.NUM_WORKERS > 0:
if cfg.TRAINER == "horovod":
buffer_size = cfg.DATA.NUM_WORKERS * 10 # one dataflow for each process, therefore don't need large buffer
ds = MultiThreadMapData(ds, cfg.DATA.NUM_WORKERS, preprocess, buffer_size=buffer_size)
# MPI does not like fork()
else:
buffer_size = cfg.DATA.NUM_WORKERS * 20
ds = MultiProcessMapData(ds, cfg.DATA.NUM_WORKERS, preprocess, buffer_size=buffer_size)
else:
ds = MapData(ds, preprocess)
return ds
def get_val_dataflow(datadir,
batch_size,
augmentors=None,
parallel=None,
num_splits=None,
split_index=None):
if augmentors is None:
augmentors = fbresnet_augmentor(False)
assert datadir is not None
assert isinstance(augmentors, list)
if parallel is None:
parallel = min(40, multiprocessing.cpu_count())
if num_splits is None:
ds = dataset.ILSVRC12Files(datadir, 'val', shuffle=False)
else:
# shard validation data
assert split_index < num_splits
files = dataset.ILSVRC12Files(datadir, 'val', shuffle=False)
files.reset_state()
files = list(files.get_data())
logger.info("Number of validation data = {}".format(len(files)))
split_size = len(files) // num_splits
start, end = split_size * split_index, split_size * (split_index + 1)
end = min(end, len(files))
logger.info("Local validation split = {} - {}".format(start, end))
files = files[start:end]
ds = DataFromList(files, shuffle=False)
aug = imgaug.AugmentorList(augmentors)
def mapf(dp):
fname, cls = dp
im = cv2.imread(fname, cv2.IMREAD_COLOR)
im = aug.augment(im)
return im, cls
ds = MultiThreadMapData(ds,
parallel,
mapf,
buffer_size=min(2000, ds.size()),
strict=True)
ds = BatchData(ds, batch_size, remainder=True)
# do not fork() under MPI
return ds
def _trigger_epoch(self):
self.active = True
logger.info("Exp3: Average Reward: {}".format(self.average_reward /
self.reward_cnt))
logger.info("Exp3: Max Reward: {}".format(self.max_reward))
logger.info("Exp3: Sample weights: {}".format(self.sample_w))
logger.info("Exp3: weights: {}".format(self.w))
self.old_average = self.average_reward
self.average_reward = np.zeros(self.K)
self.max_reward = np.zeros(self.K)
self.reward_cnt = np.ones(self.K)
def ShuffleNet(image, classes=5):
with argscope([Conv2D, MaxPooling, AvgPooling, GlobalAvgPooling, BatchNorm], data_format='channels_first'), \
argscope(Conv2D, use_bias=False):
image_channel_first = tf.transpose(image, [0, 3, 1, 2])
group = 8 #args.group
ratio = 0.5
if not True: #args.v2:
# Copied from the paper
channels = {
3: [240, 480, 960],
4: [272, 544, 1088],
8: [384, 768, 1536]
}
mul = group * 4 # #chan has to be a multiple of this number
channels = [
int(math.ceil(x * ratio / mul) * mul) for x in channels[group]
]
# The first channel must be a multiple of group
first_chan = int(math.ceil(24 * ratio / group) * group)
else:
# Copied from the paper
channels = {0.5: [48, 96, 192], 1.: [116, 232, 464]}[ratio]
first_chan = 24
logger.info("#Channels: " + str([first_chan] + channels))
l = Conv2D('conv1',
image_channel_first,
first_chan,
3,
strides=2,
activation=BNReLU)
l = MaxPooling('pool1', l, 3, 2, padding='SAME')
l = shufflenet_stage('stage2', l, channels[0], 4, group)
l = shufflenet_stage('stage3', l, channels[1], 8, group)
l = shufflenet_stage('stage4', l, channels[2], 4, group)
if True: #args.v2:
l = Conv2D('conv5', l, 1024, 1, activation=BNReLU)
l = GlobalAvgPooling('gap', l)
output = FullyConnected('linear', l, classes)
return output
def get_cifar_augmented_data(subset,
options,
do_multiprocess=True,
do_validation=False,
shuffle=None):
isTrain = subset == 'train' and do_multiprocess
shuffle = shuffle if shuffle is not None else isTrain
if options.num_classes == 10 and options.ds_name == 'cifar10':
ds = dataset.Cifar10(subset,
shuffle=shuffle,
do_validation=do_validation)
cutout_length = 16
n_holes = 1
elif options.num_classes == 100 and options.ds_name == 'cifar100':
ds = dataset.Cifar100(subset,
shuffle=shuffle,
do_validation=do_validation)
cutout_length = 8
n_holes = 1
else:
raise ValueError(
'Number of classes must be set to 10(default) or 100 for CIFAR')
logger.info('{} set has n_samples: {}'.format(subset, len(ds.data)))
pp_mean = ds.get_per_pixel_mean()
if isTrain:
logger.info('Will do cut-out with length={} n_holes={}'.format(
cutout_length, n_holes))
augmentors = [
imgaug.CenterPaste((40, 40)),
imgaug.RandomCrop((32, 32)),
imgaug.Flip(horiz=True),
imgaug.MapImage(lambda x: (x - pp_mean) / 128.0),
Cutout(length=cutout_length, n_holes=n_holes),
]
else:
augmentors = [imgaug.MapImage(lambda x: (x - pp_mean) / 128.0)]
ds = AugmentImageComponent(ds, augmentors)
ds = BatchData(ds,
options.batch_size // options.nr_gpu,
remainder=not isTrain)
if do_multiprocess:
ds = PrefetchData(ds, 3, 2)
return ds
def get_eval_dataflow(name, is_aws, is_gcs, shard=0, num_shards=1):
"""
Args:
name (str): name of the dataset to evaluate
shard, num_shards: to get subset of evaluation data
"""
roidbs = DatasetRegistry.get(name).inference_roidbs()
logger.info("Found {} images for inference.".format(len(roidbs)))
num_imgs = len(roidbs)
img_per_shard = num_imgs // num_shards
img_range = (
shard * img_per_shard,
(shard + 1) * img_per_shard if shard + 1 < num_shards else num_imgs,
)
# no filter for training
ds = DataFromListOfDict(roidbs[img_range[0] : img_range[1]], ["file_name", "image_id"])
if is_aws:
s3 = boto3.resource("s3")
elif is_gcs:
c = storage.Client.create_anonymous_client()
bucket = c.get_bucket("determined-ai-coco-dataset")
def f(fname):
if is_aws:
s3_object = s3.meta.client.get_object(Bucket="determined-ai-coco-dataset", Key=fname)
im = cv2.imdecode(
np.asarray(bytearray(s3_object["Body"].read()), dtype=np.uint8), cv2.IMREAD_COLOR,
)
elif is_gcs:
blob = bucket.blob(fname)
s = download_gcs_blob_with_backoff(blob)
im = cv2.imdecode(np.asarray(bytearray(s), dtype=np.uint8), cv2.IMREAD_COLOR)
else:
im = cv2.imread(fname, cv2.IMREAD_COLOR)
assert im is not None, fname
return im
ds = MapDataComponent(ds, f, 0)
# Evaluation itself may be multi-threaded, therefore don't add prefetch here.
return ds
def __init__(self, basedir, name):
'''
basedir = os.path.expanduser(basedir)
self.name = name
self._imgdir = os.path.realpath(os.path.join(
basedir, self._INSTANCE_TO_BASEDIR.get(name, name)))
assert os.path.isdir(self._imgdir), self._imgdir
annotation_file = os.path.join(
basedir, 'annotations/instances_{}.json'.format(name))
assert os.path.isfile(annotation_file), annotation_file
from pycocotools.coco import COCO
self.coco = COCO(annotation_file)
logger.info("Instances loaded from {}.".format(annotation_file))
'''
if basedir is not None:
self.name = name
self._imgdir = os.path.realpath(
os.path.join(basedir,
COCOMeta.INSTANCE_TO_BASEDIR.get(name, name)))
assert os.path.isdir(self._imgdir), self._imgdir
annotation_file = os.path.join(
basedir, 'annotations/instances_{}.json'.format(name))
assert os.path.isfile(annotation_file), annotation_file
from pycocotools.coco import COCO
self.coco = COCO(annotation_file)
# initialize the meta
cat_ids = self.coco.getCatIds()
cat_names = [c['name'] for c in self.coco.loadCats(cat_ids)]
else:
cat_ids = [1, 2, 3]
cat_names = ['mating', 'single_cell', 'crowd']
if not COCOMeta.valid():
COCOMeta.create(cat_ids, cat_names)
else:
assert COCOMeta.cat_names == cat_names
if basedir is not None:
logger.info("Instances loaded from {}.".format(annotation_file))
def __init__(self, basedir, name):
"""
Args:
basedir (str): root to the dataset
name (str): the name of the split, e.g. "train2017"
"""
basedir = os.path.expanduser(basedir)
self.name = name
self._imgdir = os.path.realpath(
os.path.join(basedir, self._INSTANCE_TO_BASEDIR.get(name, name)))
assert os.path.isdir(self._imgdir), "{} is not a directory!".format(
self._imgdir)
annotation_file = os.path.join(
basedir, 'annotations/instances_{}.json'.format(name))
assert os.path.isfile(annotation_file), annotation_file
from pycocotools.coco import COCO
self.coco = COCO(annotation_file)
logger.info("Instances loaded from {}.".format(annotation_file))
def eval_det(pred_all, gt_all, ovthresh=0.25, use_07_metric=False):
""" Generic functions to compute precision/recall for object detection
for multiple classes.
Input:
pred_all: map of {img_id: [(classname, bbox, score)]}
gt_all: map of {img_id: [(classname, bbox)]}
ovthresh: scalar, iou threshold
use_07_metric: bool, if true use VOC07 11 point method
Output:
rec: {classname: rec}
prec: {classname: prec_all}
ap: {classname: scalar}
"""
pred = {} # map {classname: pred}
gt = {} # map {classname: gt}
for img_id in pred_all.keys():
for classname, bbox, score in pred_all[img_id]:
if classname not in pred: pred[classname] = {}
if img_id not in pred[classname]:
pred[classname][img_id] = []
if classname not in gt: gt[classname] = {}
if img_id not in gt[classname]:
gt[classname][img_id] = []
pred[classname][img_id].append((bbox, score))
for img_id in gt_all.keys():
for classname, bbox in gt_all[img_id]:
if classname not in gt: gt[classname] = {}
if classname not in pred: pred[classname] = {}
if img_id not in gt[classname]:
gt[classname][img_id] = []
gt[classname][img_id].append(bbox)
rec = {}
prec = {}
ap = {}
for classname in gt.keys():
logger.info('Computing AP for class: ' + classname)
rec[classname], prec[classname], ap[classname] = eval_det_cls(
pred[classname], gt[classname], ovthresh)
logger.info(classname + ':' + str(ap[classname]))
# logger.info(classname + ' rec:' + str(rec[classname]))
return rec, prec, ap
def train_net(net, session_init, batch_size, num_epochs, train_dataflow,
val_dataflow):
num_towers = max(get_num_gpu(), 1)
batch_per_tower = batch_size // num_towers
logger.info("Running on {} towers. Batch size per tower: {}".format(
num_towers, batch_per_tower))
num_training_samples = 1281167
step_size = num_training_samples // batch_size
max_iter = (num_epochs - 1) * step_size
callbacks = [
ModelSaver(),
ScheduledHyperParamSetter('learning_rate', [(0, 0.5), (max_iter, 0)],
interp='linear',
step_based=True),
EstimatedTimeLeft()
]
infs = [
ClassificationError('wrong-top1', 'val-error-top1'),
ClassificationError('wrong-top5', 'val-error-top5')
]
if num_towers == 1:
# single-GPU inference with queue prefetch
callbacks.append(
InferenceRunner(input=QueueInput(val_dataflow), infs=infs))
else:
# multi-GPU inference (with mandatory queue prefetch)
callbacks.append(
DataParallelInferenceRunner(input=val_dataflow,
infs=infs,
gpus=list(range(num_towers))))
config = TrainConfig(dataflow=train_dataflow,
model=net,
callbacks=callbacks,
session_init=session_init,
steps_per_epoch=step_size,
max_epoch=num_epochs)
launch_train_with_config(
config=config, trainer=SyncMultiGPUTrainerParameterServer(num_towers))
def input_transform(self, points, k=3):
# [B,N,3] --> [3, k]
num_point = points.get_shape()[1]
points = tf.expand_dims(points, -1)
with argscope(Conv2D, nl=BNReLU, padding='VALID'), \
argscope(FullyConnected, nl=BNReLU):
transmat = (LinearWrap(points).Conv2D(
'tconv0', 64, kernel_shape=[1, 3]).Conv2D(
'tconv1', 128, kernel_shape=1).Conv2D(
'tconv2', 1024, kernel_shape=1).MaxPooling(
'tpool0', [num_point, 1]).FullyConnected(
'tfc0', 512, nl=BNReLU).FullyConnected(
'tfc1', 256,
nl=BNReLU).TransformPoints('transf_xyz',
3,
in_dim=3)())
logger.info('transformation matrix: {}\n\n'.format(
transmat.get_shape()))
return transmat
def __init__(self,
predictor_io_names,
player,
state_shape,
batch_size,
memory_size, init_memory_size,
init_exploration,
update_frequency, history_len):
"""
Args:
predictor_io_names (tuple of list of str): input/output names to
predict Q value from state.
player (gym.Env): the player.
state_shape (tuple): h, w, c
history_len (int): length of history frames to concat. Zero-filled
initial frames.
update_frequency (int): number of new transitions to add to memory
after sampling a batch of transitions for training.
"""
assert len(state_shape) == 3, state_shape
init_memory_size = int(init_memory_size)
for k, v in locals().items():
if k != 'self':
setattr(self, k, v)
self.exploration = init_exploration
self.num_actions = player.action_space.n
logger.info("Number of Legal actions: {}".format(self.num_actions))
self.rng = get_rng(self)
self._init_memory_flag = threading.Event() # tell if memory has been initialized
# a queue to receive notifications to populate memory
self._populate_job_queue = queue.Queue(maxsize=5)
self.mem = ReplayMemory(memory_size, state_shape, history_len)
self._current_ob = self.player.reset()
self.stack = []
self._player_scores = []
self._current_game_scores = []
for l in range (NUM_LEVELS):
self._current_game_scores += [StatCounter()]
self._player_scores += [StatCounter()]
def print_class_histogram(roidbs):
"""
Args:
roidbs (list[dict]): the same format as the output of `load_training_roidbs`.
"""
dataset = DetectionDataset()
hist_bins = np.arange(dataset.num_classes + 1)
# Histogram of ground-truth objects
gt_hist = np.zeros((dataset.num_classes, ), dtype=np.int)
for entry in roidbs:
# filter crowd?
gt_inds = np.where((entry['class'] > 0) & (entry['is_crowd'] == 0))[0]
gt_classes = entry['class'][gt_inds]
gt_hist += np.histogram(gt_classes, bins=hist_bins)[0]
data = [[dataset.class_names[i], v] for i, v in enumerate(gt_hist)]
data.append(['total', sum([x[1] for x in data])])
table = tabulate(data, headers=['class', '#box'], tablefmt='pipe')
logger.info("Ground-Truth Boxes:\n" + colored(table, 'cyan'))
def mvsnet_gn(x,
group=32,
group_channel=8,
epsilon=1e-5,
channel_wise=True,
data_format='channels_last',
beta_initializer=tf.constant_initializer(),
gamma_initializer=tf.constant_initializer(1.)):
assert len(x.get_shape().as_list()) == 4, len(x.get_shape().as_list())
assert data_format in ['channels_first', 'channels_last'], data_format
if data_format == 'channels_first':
_, c, h, w = x.get_shape().as_list()
logger.info('f**k you f**k you! %s' % data_format)
else:
_, h, w, c = x.get_shape().as_list()
x = tf.transpose(x, [0, 3, 1, 2])
# assert c < 100, c
if channel_wise:
g = tf.cast(tf.maximum(1, c // group_channel), tf.int32)
else:
g = tf.cast(tf.minimum(group, c), tf.int32)
# normalization
# tf.Print()
x = tf.reshape(x, (-1, g, c // g, h, w))
new_shape = [1, c, 1, 1]
mean, var = tf.nn.moments(x, [2, 3, 4], keep_dims=True)
beta = tf.get_variable('beta', [c],
dtype=tf.float32,
initializer=beta_initializer)
beta = tf.reshape(beta, new_shape)
gamma = tf.get_variable('gamma', [c],
dtype=tf.float32,
initializer=gamma_initializer)
gamma = tf.reshape(gamma, new_shape)
x = (x - mean) / tf.sqrt(var + epsilon)
x = tf.reshape(x, [-1, c, h, w]) * gamma + beta
if data_format == 'channels_last':
x = tf.transpose(x, [0, 2, 3, 1])
return x
def proceed_test(args, is_densecrf=False):
import cv2
ds = dataset.Aerial(args.base_dir, args.meta_dir, "test")
imglist = ds.imglist
ds = BatchData(ds, 1)
pred_config = PredictConfig(model=Model(),
session_init=get_model_loader(args.load),
input_names=['image'],
output_names=['prob'])
predictor = OfflinePredictor(pred_config)
from tensorpack.utils.fs import mkdir_p
result_dir = "test-{}".format(os.path.basename(__file__).rstrip(".py"))
import shutil
shutil.rmtree(result_dir, ignore_errors=True)
mkdir_p(result_dir)
mkdir_p(os.path.join(result_dir, "compressed"))
import subprocess
logger.info("start validation....")
_itr = ds.get_data()
for i in tqdm(range(len(imglist))):
image = next(_itr)
name = os.path.basename(imglist[i]).rstrip(".tif")
image = np.squeeze(image)
prediction = predict_scaler(image,
predictor,
scales=[0.9, 1, 1.1],
classes=CLASS_NUM,
tile_size=CROP_SIZE,
is_densecrf=is_densecrf)
prediction = np.argmax(prediction, axis=2)
prediction = prediction * 255 # to 0-255
file_path = os.path.join(result_dir, "{}.tif".format(name))
compressed_file_path = os.path.join(result_dir, "compressed",
"{}.tif".format(name))
cv2.imwrite(file_path, prediction)
command = "gdal_translate --config GDAL_PAM_ENABLED NO -co COMPRESS=CCITTFAX4 -co NBITS=1 " + file_path + " " + compressed_file_path
print command
subprocess.call(command, shell=True)
def build_graph(self, image, label):
"""
The default tower function.
"""
image = self.image_preprocess(image)
assert self.data_format == 'NCHW'
image = tf.transpose(image, [0, 3, 1, 2])
with tf.variable_scope(tf.get_variable_scope(), reuse=tf.AUTO_REUSE):
# BatchNorm always comes with trouble. We use the testing mode of it during attack.
with freeze_collection([tf.GraphKeys.UPDATE_OPS
]), argscope(BatchNorm, training=False):
if hasattr(self, 'palatte'):
print("======palatte")
image, target_label = self.attacker.attack(
image, label, self.get_logits_raw, self.palatte)
else:
image, target_label = self.attacker.attack(
image, label, self.get_logits)
image = tf.stop_gradient(image, name='adv_training_sample')
logits = self.get_logits(image)
loss = ImageNetModel.compute_loss_and_error(
logits, label, label_smoothing=self.label_smoothing)
AdvImageNetModel.compute_attack_success(logits, target_label)
if not self.training:
return
wd_loss = regularize_cost(self.weight_decay_pattern,
tf.contrib.layers.l2_regularizer(
self.weight_decay),
name='l2_regularize_loss')
add_moving_summary(loss, wd_loss)
total_cost = tf.add_n([loss, wd_loss], name='cost')
self.step = 1
if self.loss_scale != 1.:
logger.info("Scaling the total loss by {} ...".format(
self.loss_scale))
return total_cost * self.loss_scale
else:
return total_cost
def __init__(
self,
# model,
agent_name,
player,
state_shape,
num_actions,
batch_size,
memory_size,
init_memory_size,
init_exploration,
update_frequency,
encoding_file='../AutoEncoder/encoding.npy'):
init_memory_size = int(init_memory_size)
# self.model = model
for k, v in locals().items():
if k != 'self':
setattr(self, k, v)
self.agent_name = agent_name
self.exploration = init_exploration
self.num_actions = num_actions
self.encoding = np.load(encoding_file)
logger.info(
"Number of Legal actions: {}, {}".format(*self.num_actions))
self.rng = get_rng(self)
self._init_memory_flag = threading.Event(
) # tell if memory has been initialized
# a queue to receive notifications to populate memory
self._populate_job_queue = queue.Queue(maxsize=5)
self.mem = ReplayMemory(memory_size, state_shape)
self.player.reset()
self.player.prepare()
self._comb_mask = True
self._fine_mask = None
self._current_ob, self._action_space = self.get_state_and_action_spaces(
)
self._player_scores = StatCounter()
self._current_game_score = StatCounter()
def proceed_test_dir(args):
import cv2
ll = os.listdir(args.test_dir)
pred_config = PredictConfig(model=Model(),
session_init=get_model_loader(args.load),
input_names=['image'],
output_names=['prob'])
predictor = OfflinePredictor(pred_config)
from tensorpack.utils.fs import mkdir_p
result_dir = "test-from-dir"
visual_dir = os.path.join(result_dir, "visualization")
final_dir = os.path.join(result_dir, "final")
import shutil
shutil.rmtree(result_dir, ignore_errors=True)
mkdir_p(result_dir)
mkdir_p(visual_dir)
mkdir_p(final_dir)
logger.info("start validation....")
def mypredictor(input_img):
# input image: 1*H*W*3
# output : H*W*C
output = predictor(input_img[np.newaxis, :, :, :])
return output[0][0]
for i in tqdm(range(len(ll))):
filename = ll[i]
image = cv2.imread(os.path.join(args.test_dir, filename))
prediction = predict_scaler(image,
mypredictor,
scales=[0.5, 0.75, 1, 1.25, 1.5],
classes=CLASS_NUM,
tile_size=CROP_SIZE,
is_densecrf=False)
prediction = np.argmax(prediction, axis=2)
cv2.imwrite(os.path.join(final_dir, "{}".format(filename)), prediction)
cv2.imwrite(
os.path.join(visual_dir, "{}".format(filename)),
np.concatenate((image, visualize_label(prediction)), axis=1))
def train_single_model(self, model_idx, result_q):
logger.info("[train_single_model] model_idx:{}".format(model_idx))
critic_loss_list = []
lock = self.locks[model_idx]
actor = self.actors[model_idx]
lr_critic = self.lr_critic * (1.0 + 0.1 * model_idx)
lr_actor = self.lr_actor * (1.0 - 0.05 * model_idx)
states = np.random.random((self.BATCH_SIZE, param.state_dim))
actions = np.random.random((self.BATCH_SIZE, param.action_dim))
rewards = np.random.random(self.BATCH_SIZE)
dones = np.array([False] * self.BATCH_SIZE, dtype='bool')
new_states = np.random.random((self.BATCH_SIZE, param.state_dim))
for T in range(self.train_times):
lock.acquire()
_, _, critic_loss = actor.combine_train(states, actions, rewards,
dones, new_states,
lr_critic, lr_actor)
lock.release()
critic_loss_list.append(critic_loss)
result_q.put(critic_loss_list)
def texture_loss(x, p=16):
x = normalize(x)
_, h, w, c = x.get_shape().as_list()
assert h % p == 0 and w % p == 0
logger.info(
'Create texture loss for layer {} with shape {}'.
format(x.name, x.get_shape()))
x = tf.space_to_batch_nd(x, [p, p], [[0, 0], [0, 0]])
x = tf.reshape(x, [p, p, -1, h // p, w // p, c])
x = tf.transpose(x, [2, 3, 4, 0, 1, 5])
patches_a, patches_b = tf.split(
x, 2) # each is b,h/p,w/p,p,p,c
patches_a = tf.reshape(patches_a, [-1, p, p, c])
patches_b = tf.reshape(patches_b, [-1, p, p, c])
return tf.losses.mean_squared_error(
gram_matrix(patches_a),
gram_matrix(patches_b),
reduction=Reduction.SUM) * (1.0 / BATCH_SIZE)
def _before_train(self):
# graph is finalized, OK to write it now.
time = datetime.now().strftime('%m%d-%H%M%S')
self.saver.export_meta_graph(
os.path.join(self.checkpoint_dir, 'graph-{}.meta'.format(time)),
collection_list=self.graph.get_all_collection_keys())
# save
try:
self.saver.save(tf.get_default_session(),
self.path,
global_step=tf.train.get_global_step(),
write_meta_graph=False)
logger.info("Model saved to %s." % tf.train.get_checkpoint_state(
self.checkpoint_dir).model_checkpoint_path)
except (OSError, IOError, tf.errors.PermissionDeniedError,
tf.errors.ResourceExhaustedError
): # disk error sometimes.. just ignore it
logger.exception("Exception in ModelSaver!")
exit()
def __init__(self, basedir, name):
assert name in COCOMeta.INSTANCE_TO_BASEDIR.keys(), name
self.name = name
self._imgdir = os.path.join(basedir, COCOMeta.INSTANCE_TO_BASEDIR[name])
assert os.path.isdir(self._imgdir), self._imgdir
annotation_file = os.path.join(
basedir, 'annotations/instances_{}.json'.format(name))
assert os.path.isfile(annotation_file), annotation_file
self.coco = COCO(annotation_file)
# initialize the meta
cat_ids = self.coco.getCatIds()
cat_names = [c['name'] for c in self.coco.loadCats(cat_ids)]
if not COCOMeta.valid():
COCOMeta.create(cat_ids, cat_names)
else:
assert COCOMeta.cat_names == cat_names
logger.info("Instances loaded from {}.".format(annotation_file))
def __init__(self, basedir, name):
assert name in COCOMeta.INSTANCE_TO_BASEDIR.keys(), name
self.name = name
self._imgdir = os.path.join(basedir, COCOMeta.INSTANCE_TO_BASEDIR[name])
assert os.path.isdir(self._imgdir), self._imgdir
annotation_file = os.path.join(
basedir, 'annotations/instances_{}.json'.format(name))
assert os.path.isfile(annotation_file), annotation_file
self.coco = COCO(annotation_file)
# initialize the meta
cat_ids = self.coco.getCatIds()
cat_names = [c['name'] for c in self.coco.loadCats(cat_ids)]
if not COCOMeta.valid():
COCOMeta.create(cat_ids, cat_names)
else:
assert COCOMeta.cat_names == cat_names
logger.info("Instances loaded from {}.".format(annotation_file))
def __init__(self, args):
super(AnytimeFCN, self).__init__(None, args)
# Class weight for fully convolutional networks
self.class_weight = None
if hasattr(args, 'class_weight'):
self.class_weight = args.class_weight
if self.class_weight is None:
self.class_weight = np.ones(self.num_classes, dtype=np.float32)
logger.info('Class weights: {}'.format(self.class_weight))
self.is_label_one_hot = args.is_label_one_hot
self.eval_threshold = args.eval_threshold
self.do_scale_feat_to_label = args.do_scale_feat_to_label
self.n_pools = args.n_pools if not self.do_scale_feat_to_label else 0
self.is_atrous = args.is_atrous
self.output_stride = args.output_stride
# base_o_s / o_s * base_rate ; base_o_s == 16
self.atrous_rates = [6, 12, 18]
self.atrous_rates_base_output_stride = 16
def _setup_graph(self):
# get weight copy ops
trainable_collection = tf.get_collection_ref(
tf.GraphKeys.TRAINABLE_VARIABLES)
mirrored_collection_name_map = dict()
for var in trainable_collection:
mirrored_collection_name_map[var.name.replace(
self.src_scope + '/', '')] = var
mirrored_collection_name_set = set(mirrored_collection_name_map.keys())
model_collection = tf.get_collection_ref(tf.GraphKeys.MODEL_VARIABLES)
assign_ops = []
for var in model_collection:
if var.name in mirrored_collection_name_set:
op = var.assign(mirrored_collection_name_map[var.name])
assign_ops.append(op)
self.assign_ops.extend(assign_ops)
assert len(assign_ops) == len(trainable_collection)
logger.info(
'[WeightSyncCallBack] Create {} assign ops for WeightSyncCallBack, schedule = {}'
.format(len(assign_ops), self.schedule))
def do_predict(predictor, input_file):
try:
img = cv2.imread(os.path.join('test_images', input_file),
cv2.IMREAD_COLOR)
results = predict_image(img, predictor)
if cfg.MODE_MASK:
final = draw_final_outputs_blackwhite(img, results)
else:
final = draw_final_outputs(img, results)
viz = final.copy(
) #np.concatenate((img, final), axis=1) #concatenate hata dena
opp = cv2.imwrite(
os.path.join(os.getcwd(), 'test_inferences',
input_file.split('.')[0] + ".png"), viz)
if opp:
logger.info(
"Inference output for {} Successful".format(input_file))
except:
print(input_file)
def print_class_histogram(roidbs):
"""
Args:
roidbs (list[dict]): the same format as the output of `training_roidbs`.
"""
# labels are in [1, NUM_CATEGORY], hence +2 for bins
hist_bins = np.arange(cfg.DATA.NUM_CATEGORY + 2)
# Histogram of ground-truth objects
gt_hist = np.zeros((cfg.DATA.NUM_CATEGORY + 1,), dtype=np.int)
for entry in roidbs:
# filter crowd?
gt_inds = np.where((entry["class"] > 0) & (entry["is_crowd"] == 0))[0]
gt_classes = entry["class"][gt_inds]
gt_hist += np.histogram(gt_classes, bins=hist_bins)[0]
data = [[cfg.DATA.CLASS_NAMES[i], v] for i, v in enumerate(gt_hist)]
data.append(["total", sum(x[1] for x in data)])
# the first line is BG
table = tabulate(data[1:], headers=["class", "#box"], tablefmt="pipe")
logger.info("Ground-Truth Boxes:\n" + colored(table, "cyan"))
def finalize_configs(is_training):
"""
Run some sanity checks, and populate some configs from others
"""
_C.DATA.NUM_CLASS = _C.DATA.NUM_CATEGORY + 1 # +1 background
_C.RPN.NUM_ANCHOR = len(_C.RPN.ANCHOR_SIZES) * len(_C.RPN.ANCHOR_RATIOS)
assert len(_C.FPN.ANCHOR_STRIDES) == len(_C.RPN.ANCHOR_SIZES)
# image size into the backbone has to be multiple of this number
_C.FPN.RESOLUTION_REQUIREMENT = _C.FPN.ANCHOR_STRIDES[
3] # [3] because we build FPN with features r2,r3,r4,r5
if _C.MODE_FPN:
size_mult = _C.FPN.RESOLUTION_REQUIREMENT * 1.
_C.PREPROC.MAX_SIZE = np.ceil(
_C.PREPROC.MAX_SIZE / size_mult) * size_mult
if is_training:
os.environ['TF_AUTOTUNE_THRESHOLD'] = '1'
assert _C.TRAINER in ['horovod', 'replicated'], _C.TRAINER
# setup NUM_GPUS
if _C.TRAINER == 'horovod':
import horovod.tensorflow as hvd
ngpu = hvd.size()
else:
assert 'OMPI_COMM_WORLD_SIZE' not in os.environ
ngpu = get_num_gpu()
assert ngpu % 8 == 0 or 8 % ngpu == 0, ngpu
if _C.TRAIN.NUM_GPUS is None:
_C.TRAIN.NUM_GPUS = ngpu
else:
if _C.TRAINER == 'horovod':
assert _C.TRAIN.NUM_GPUS == ngpu
else:
assert _C.TRAIN.NUM_GPUS <= ngpu
else:
# autotune is too slow for inference
os.environ['TF_CUDNN_USE_AUTOTUNE'] = '0'
logger.info("Config: ------------------------------------------\n" +
str(_C))
def get_logits(self, image):
with argscope([Conv2D, MaxPooling, AvgPooling, GlobalAvgPooling, BatchNorm], data_format='channels_first'), \
argscope(Conv2D, use_bias=False):
group = args.group
if not args.v2:
# Copied from the paper
channels = {
3: [240, 480, 960],
4: [272, 544, 1088],
8: [384, 768, 1536]
}
mul = group * 4 # #chan has to be a multiple of this number
channels = [int(math.ceil(x * args.ratio / mul) * mul)
for x in channels[group]]
# The first channel must be a multiple of group
first_chan = int(math.ceil(24 * args.ratio / group) * group)
else:
# Copied from the paper
channels = {
0.5: [48, 96, 192],
1.: [116, 232, 464]
}[args.ratio]
first_chan = 24
logger.info("#Channels: " + str([first_chan] + channels))
l = Conv2D('conv1', image, first_chan, 3, strides=2, activation=BNReLU)
l = MaxPooling('pool1', l, 3, 2, padding='SAME')
l = shufflenet_stage('stage2', l, channels[0], 4, group)
l = shufflenet_stage('stage3', l, channels[1], 8, group)
l = shufflenet_stage('stage4', l, channels[2], 4, group)
if args.v2:
l = Conv2D('conv5', l, 1024, 1, activation=BNReLU)
l = GlobalAvgPooling('gap', l)
logits = FullyConnected('linear', l, 1000)
return logits
def run(self):
self.clients = defaultdict(self.ClientState)
try:
while True:
msg = loads(self.c2s_socket.recv(copy=False).bytes)
ident, state, reward, isOver = msg
# TODO check history and warn about dead client
client = self.clients[ident]
# check if reward&isOver is valid
# in the first message, only state is valid
if len(client.memory) > 0:
client.memory[-1].reward = reward
if isOver:
self._on_episode_over(ident)
else:
self._on_datapoint(ident)
# feed state and return action
self._on_state(state, ident)
except zmq.ContextTerminated:
logger.info("[Simulator] Context was terminated.")
def __init__(self,
predictor_io_names,
player,
state_shape,
batch_size,
memory_size, init_memory_size,
init_exploration,
update_frequency, history_len):
"""
Args:
predictor_io_names (tuple of list of str): input/output names to
predict Q value from state.
player (RLEnvironment): the player.
state_shape (tuple): h, w, c
history_len (int): length of history frames to concat. Zero-filled
initial frames.
update_frequency (int): number of new transitions to add to memory
after sampling a batch of transitions for training.
"""
assert len(state_shape) == 3, state_shape
init_memory_size = int(init_memory_size)
for k, v in locals().items():
if k != 'self':
setattr(self, k, v)
self.exploration = init_exploration
self.num_actions = player.action_space.n
logger.info("Number of Legal actions: {}".format(self.num_actions))
self.rng = get_rng(self)
self._init_memory_flag = threading.Event() # tell if memory has been initialized
# a queue to receive notifications to populate memory
self._populate_job_queue = queue.Queue(maxsize=5)
self.mem = ReplayMemory(memory_size, state_shape, history_len)
self._current_ob = self.player.reset()
self._player_scores = StatCounter()
self._current_game_score = StatCounter()
def finalize_configs(is_training):
"""
Run some sanity checks, and populate some configs from others
"""
_C.DATA.NUM_CLASS = _C.DATA.NUM_CATEGORY + 1 # +1 background
_C.RPN.NUM_ANCHOR = len(_C.RPN.ANCHOR_SIZES) * len(_C.RPN.ANCHOR_RATIOS)
assert len(_C.FPN.ANCHOR_STRIDES) == len(_C.RPN.ANCHOR_SIZES)
# image size into the backbone has to be multiple of this number
_C.FPN.RESOLUTION_REQUIREMENT = _C.FPN.ANCHOR_STRIDES[3] # [3] because we build FPN with features r2,r3,r4,r5
if _C.MODE_FPN:
size_mult = _C.FPN.RESOLUTION_REQUIREMENT * 1.
_C.PREPROC.MAX_SIZE = np.ceil(_C.PREPROC.MAX_SIZE / size_mult) * size_mult
if is_training:
os.environ['TF_AUTOTUNE_THRESHOLD'] = '1'
assert _C.TRAINER in ['horovod', 'replicated'], _C.TRAINER
# setup NUM_GPUS
if _C.TRAINER == 'horovod':
import horovod.tensorflow as hvd
ngpu = hvd.size()
else:
assert 'OMPI_COMM_WORLD_SIZE' not in os.environ
ngpu = get_num_gpu()
assert ngpu % 8 == 0 or 8 % ngpu == 0, ngpu
if _C.TRAIN.NUM_GPUS is None:
_C.TRAIN.NUM_GPUS = ngpu
else:
if _C.TRAINER == 'horovod':
assert _C.TRAIN.NUM_GPUS == ngpu
else:
assert _C.TRAIN.NUM_GPUS <= ngpu
else:
# autotune is too slow for inference
os.environ['TF_CUDNN_USE_AUTOTUNE'] = '0'
logger.info("Config: ------------------------------------------\n" + str(_C))
def build_graph(self, image, label):
image = ImageNetModel.image_preprocess(image, bgr=self.image_bgr)
assert self.data_format in ['NCHW', 'NHWC']
if self.data_format == 'NCHW':
image = tf.transpose(image, [0, 3, 1, 2])
logits = self.get_logits(image)
loss = ImageNetModel.compute_loss_and_error(logits, label)
if self.weight_decay > 0:
wd_loss = regularize_cost(self.weight_decay_pattern,
tf.contrib.layers.l2_regularizer(self.weight_decay),
name='l2_regularize_loss')
add_moving_summary(loss, wd_loss)
total_cost = tf.add_n([loss, wd_loss], name='cost')
else:
total_cost = tf.identity(loss, name='cost')
add_moving_summary(total_cost)
if self.loss_scale != 1.:
logger.info("Scaling the total loss by {} ...".format(self.loss_scale))
return total_cost * self.loss_scale
else:
return total_cost
get_config_func = imp.load_source('config_script', args.config).get_config
config = get_config_func()
config.dataset.reset_state()
if args.output:
mkdir_p(args.output)
cnt = 0
index = args.index # TODO: as an argument?
for dp in config.dataset.get_data():
imgbatch = dp[index]
if cnt > args.number:
break
for bi, img in enumerate(imgbatch):
cnt += 1
fname = os.path.join(args.output, '{:03d}-{}.png'.format(cnt, bi))
cv2.imwrite(fname, img * args.scale)
NR_DP_TEST = args.number
logger.info("Testing dataflow speed:")
ds = RepeatedData(config.dataset, -1)
with tqdm.tqdm(total=NR_DP_TEST, leave=True, unit='data points') as pbar:
for idx, dp in enumerate(ds.get_data()):
del dp
if idx > NR_DP_TEST:
break
pbar.update()
#!/usr/bin/env python
# -*- coding: utf-8 -*-
# File: checkpoint-manipulate.py
# Author: Yuxin Wu <*****@*****.**>
import numpy as np
from tensorpack.tfutils.varmanip import dump_chkpt_vars
from tensorpack.utils import logger
import argparse
parser = argparse.ArgumentParser()
parser.add_argument('checkpoint')
parser.add_argument('--dump', help='dump to an npy file')
parser.add_argument('--shell', action='store_true', help='start a shell with the params')
args = parser.parse_args()
if args.checkpoint.endswith('.npy'):
params = np.load(args.checkpoint).item()
else:
params = dump_chkpt_vars(args.checkpoint)
logger.info("Variables in the checkpoint:")
logger.info(str(params.keys()))
if args.dump:
np.save(args.dump, params)
if args.shell:
import IPython as IP
IP.embed(config=IP.terminal.ipapp.load_default_config())
def fetch():
r = q.get()
stat.feed(r)
if verbose:
logger.info("Score: {}".format(r))
def print_config():
logger.info("Config: ------------------------------------------")
for k in dir(config):
if k == k.upper():
logger.info("{} = {}".format(k, getattr(config, k)))
logger.info("--------------------------------------------------")
def play_n_episodes(player, predfunc, nr, render=False):
logger.info("Start Playing ... ")
for k in range(nr):
score = play_one_episode(player, predfunc, render=render)
print("{}/{}, score={}".format(k, nr, score))
def finalize_configs(is_training):
"""
Run some sanity checks, and populate some configs from others
"""
_C.DATA.NUM_CLASS = _C.DATA.NUM_CATEGORY + 1 # +1 background
_C.DATA.BASEDIR = os.path.expanduser(_C.DATA.BASEDIR)
assert _C.BACKBONE.NORM in ['FreezeBN', 'SyncBN', 'GN'], _C.BACKBONE.NORM
if _C.BACKBONE.NORM != 'FreezeBN':
assert not _C.BACKBONE.FREEZE_AFFINE
assert _C.BACKBONE.FREEZE_AT in [0, 1, 2]
_C.RPN.NUM_ANCHOR = len(_C.RPN.ANCHOR_SIZES) * len(_C.RPN.ANCHOR_RATIOS)
assert len(_C.FPN.ANCHOR_STRIDES) == len(_C.RPN.ANCHOR_SIZES)
# image size into the backbone has to be multiple of this number
_C.FPN.RESOLUTION_REQUIREMENT = _C.FPN.ANCHOR_STRIDES[3] # [3] because we build FPN with features r2,r3,r4,r5
if _C.MODE_FPN:
size_mult = _C.FPN.RESOLUTION_REQUIREMENT * 1.
_C.PREPROC.MAX_SIZE = np.ceil(_C.PREPROC.MAX_SIZE / size_mult) * size_mult
assert _C.FPN.PROPOSAL_MODE in ['Level', 'Joint']
assert _C.FPN.FRCNN_HEAD_FUNC.endswith('_head')
assert _C.FPN.MRCNN_HEAD_FUNC.endswith('_head')
assert _C.FPN.NORM in ['None', 'GN']
if _C.FPN.CASCADE:
num_cascade = _C.CASCADE.NUM_STAGES
# the first threshold is the proposal sampling threshold
assert len(_C.CASCADE.IOUS) == num_cascade
assert _C.CASCADE.IOUS[0] == _C.FRCNN.FG_THRESH
assert len(_C.CASCADE.BBOX_REG_WEIGHTS) == num_cascade
if is_training:
train_scales = _C.PREPROC.TRAIN_SHORT_EDGE_SIZE
if train_scales[1] - train_scales[0] > 100:
# don't warmup if augmentation is on
os.environ['TF_CUDNN_USE_AUTOTUNE'] = '0'
os.environ['TF_AUTOTUNE_THRESHOLD'] = '1'
assert _C.TRAINER in ['horovod', 'replicated'], _C.TRAINER
# setup NUM_GPUS
if _C.TRAINER == 'horovod':
import horovod.tensorflow as hvd
ngpu = hvd.size()
else:
assert 'OMPI_COMM_WORLD_SIZE' not in os.environ
ngpu = get_num_gpu()
assert ngpu > 0, "Has to run with GPU!"
assert ngpu % 8 == 0 or 8 % ngpu == 0, ngpu
if _C.TRAIN.NUM_GPUS is None:
_C.TRAIN.NUM_GPUS = ngpu
else:
if _C.TRAINER == 'horovod':
assert _C.TRAIN.NUM_GPUS == ngpu
else:
assert _C.TRAIN.NUM_GPUS <= ngpu
else:
# autotune is too slow for inference
os.environ['TF_CUDNN_USE_AUTOTUNE'] = '0'
_C.freeze()
logger.info("Config: ------------------------------------------\n" + str(_C))
# manually build the graph with batch=1
input_desc = [
InputDesc(tf.float32, [1, 224, 224, 3], 'input'),
InputDesc(tf.int32, [1], 'label')
]
input = PlaceholderInput()
input.setup(input_desc)
with TowerContext('', is_training=False):
model.build_graph(*input.get_input_tensors())
model_utils.describe_trainable_vars()
tf.profiler.profile(
tf.get_default_graph(),
cmd='op',
options=tf.profiler.ProfileOptionBuilder.float_operation())
logger.info("Note that TensorFlow counts flops in a different way from the paper.")
logger.info("TensorFlow counts multiply+add as two flops, however the paper counts them "
"as 1 flop because it can be executed in one instruction.")
else:
if args.v2:
name = "ShuffleNetV2-{}x".format(args.ratio)
else:
name = "ShuffleNetV1-{}x-g{}".format(args.ratio, args.group)
logger.set_logger_dir(os.path.join('train_log', name))
nr_tower = max(get_num_gpu(), 1)
config = get_config(model, nr_tower)
if args.load:
config.session_init = get_model_loader(args.load)
launch_train_with_config(config, SyncMultiGPUTrainerParameterServer(nr_tower))
def additional_losses(a, b):
with tf.variable_scope('VGG19'):
x = tf.concat([a, b], axis=0)
x = tf.reshape(x, [2 * BATCH_SIZE, SHAPE_LR * 4, SHAPE_LR * 4, 3]) * 255.0
x = x - VGG_MEAN_TENSOR
# VGG 19
with varreplace.freeze_variables():
with argscope(Conv2D, kernel_size=3, activation=tf.nn.relu):
conv1_1 = Conv2D('conv1_1', x, 64)
conv1_2 = Conv2D('conv1_2', conv1_1, 64)
pool1 = MaxPooling('pool1', conv1_2, 2) # 64
conv2_1 = Conv2D('conv2_1', pool1, 128)
conv2_2 = Conv2D('conv2_2', conv2_1, 128)
pool2 = MaxPooling('pool2', conv2_2, 2) # 32
conv3_1 = Conv2D('conv3_1', pool2, 256)
conv3_2 = Conv2D('conv3_2', conv3_1, 256)
conv3_3 = Conv2D('conv3_3', conv3_2, 256)
conv3_4 = Conv2D('conv3_4', conv3_3, 256)
pool3 = MaxPooling('pool3', conv3_4, 2) # 16
conv4_1 = Conv2D('conv4_1', pool3, 512)
conv4_2 = Conv2D('conv4_2', conv4_1, 512)
conv4_3 = Conv2D('conv4_3', conv4_2, 512)
conv4_4 = Conv2D('conv4_4', conv4_3, 512)
pool4 = MaxPooling('pool4', conv4_4, 2) # 8
conv5_1 = Conv2D('conv5_1', pool4, 512)
conv5_2 = Conv2D('conv5_2', conv5_1, 512)
conv5_3 = Conv2D('conv5_3', conv5_2, 512)
conv5_4 = Conv2D('conv5_4', conv5_3, 512)
pool5 = MaxPooling('pool5', conv5_4, 2) # 4
# perceptual loss
with tf.name_scope('perceptual_loss'):
pool2 = normalize(pool2)
pool5 = normalize(pool5)
phi_a_1, phi_b_1 = tf.split(pool2, 2, axis=0)
phi_a_2, phi_b_2 = tf.split(pool5, 2, axis=0)
logger.info('Create perceptual loss for layer {} with shape {}'.format(pool2.name, pool2.get_shape()))
pool2_loss = tf.losses.mean_squared_error(phi_a_1, phi_b_1, reduction=Reduction.MEAN)
logger.info('Create perceptual loss for layer {} with shape {}'.format(pool5.name, pool5.get_shape()))
pool5_loss = tf.losses.mean_squared_error(phi_a_2, phi_b_2, reduction=Reduction.MEAN)
# texture loss
with tf.name_scope('texture_loss'):
def texture_loss(x, p=16):
_, h, w, c = x.get_shape().as_list()
x = normalize(x)
assert h % p == 0 and w % p == 0
logger.info('Create texture loss for layer {} with shape {}'.format(x.name, x.get_shape()))
x = tf.space_to_batch_nd(x, [p, p], [[0, 0], [0, 0]]) # [b * ?, h/p, w/p, c]
x = tf.reshape(x, [p, p, -1, h // p, w // p, c]) # [p, p, b, h/p, w/p, c]
x = tf.transpose(x, [2, 3, 4, 0, 1, 5]) # [b * ?, p, p, c]
patches_a, patches_b = tf.split(x, 2, axis=0) # each is b,h/p,w/p,p,p,c
patches_a = tf.reshape(patches_a, [-1, p, p, c]) # [b * ?, p, p, c]
patches_b = tf.reshape(patches_b, [-1, p, p, c]) # [b * ?, p, p, c]
return tf.losses.mean_squared_error(
gram_matrix(patches_a),
gram_matrix(patches_b),
reduction=Reduction.MEAN
)
texture_loss_conv1_1 = tf.identity(texture_loss(conv1_1), name='normalized_conv1_1')
texture_loss_conv2_1 = tf.identity(texture_loss(conv2_1), name='normalized_conv2_1')
texture_loss_conv3_1 = tf.identity(texture_loss(conv3_1), name='normalized_conv3_1')
return [pool2_loss, pool5_loss, texture_loss_conv1_1, texture_loss_conv2_1, texture_loss_conv3_1]