def __init_layouts(self):
# The translators are used to determine the rack position holding
# the pool information.
for issr in self.stock_rack_map.itervalues():
cnv = StockSampleCreationLayoutConverter(issr.rack_layout,
parent=self)
self.__ssc_layout_map[issr.rack.barcode] = cnv.get_result()
def __build_preparation_plate_map(self):
for spp in self.iso.iso_sector_preparation_plates:
self.__prep_plate_map[spp.sector_index] = spp
# Record empty positions to ignore later when building the
# dilution jobs.
cnv = StockSampleCreationLayoutConverter(spp.rack_layout,
parent=self)
ssc_layout = cnv.get_result()
self.__ssc_layout_map[spp.sector_index] = ssc_layout
all_poss = get_positions_for_shape(RACK_SHAPE_NAMES.SHAPE_96)
empty_poss = \
list(set(all_poss).difference(ssc_layout.get_positions()))
self.__empty_stock_rack_positions_map[spp.sector_index] = \
empty_poss
def __get_layout(self):
# Fetches the stock sample layout and sorts its positions into
# quadrants.
self.add_debug("Fetch stock sample layout ...")
converter = StockSampleCreationLayoutConverter(self.entity.rack_layout, parent=self)
self.__ssc_layout = converter.get_result()
if self.__ssc_layout is None:
msg = "Error when trying to convert stock sample creation ISO " "layout."
self.add_error(msg)
else:
ssc_positions = self.__ssc_layout.get_positions()
for rack_pos in get_positions_for_shape(RACK_SHAPE_NAMES.SHAPE_96):
if not rack_pos in ssc_positions:
self.__ignore_positions.append(rack_pos)
def __build_preparation_plate_map(self):
for spp in self.iso.iso_sector_preparation_plates:
self.__prep_plate_map[spp.sector_index] = spp
# Record empty positions to ignore later when building the
# dilution jobs.
cnv = StockSampleCreationLayoutConverter(spp.rack_layout,
parent=self)
ssc_layout = cnv.get_result()
self.__ssc_layout_map[spp.sector_index] = ssc_layout
all_poss = get_positions_for_shape(RACK_SHAPE_NAMES.SHAPE_96)
empty_poss = \
list(set(all_poss).difference(ssc_layout.get_positions()))
self.__empty_stock_rack_positions_map[spp.sector_index] = \
empty_poss
def __get_layout(self):
# Fetches the stock sample layout and sorts its positions into
# quadrants.
self.add_debug('Fetch stock sample layout ...')
converter = StockSampleCreationLayoutConverter(self.entity.rack_layout,
parent=self)
self.__ssc_layout = converter.get_result()
if self.__ssc_layout is None:
msg = 'Error when trying to convert stock sample creation ISO ' \
'layout.'
self.add_error(msg)
else:
ssc_positions = self.__ssc_layout.get_positions()
for rack_pos in get_positions_for_shape(RACK_SHAPE_NAMES.SHAPE_96):
if not rack_pos in ssc_positions:
self.__ignore_positions.append(rack_pos)
