def init(self, amp_frame, cv_frame):
"""
make all the widget elements in this method
:return:
"""
graph_props = graph_properties.GraphProps()
update_param_dict()
bottom_frame = self.make_bottom_frames()
self.make_connect_button(bottom_frame[1])
""" Add the cyclic voltammetry graph, first decide how to make the graph and then display it
NOTE: THE canvas_graph_embed DOES NOT WORK RIGHT NOW"""
if self.display_type == 'matplotlib':
amp_graph = tkinter_pyplot.PyplotEmbed(self, bottom_frame[0],
graph_props.amp_plot,
amp_frame, operation_params)
cv_graph = tkinter_pyplot.PyplotEmbed(self, bottom_frame[0],
graph_props.cv_plot,
cv_frame, operation_params)
else:
amp_graph = tkinter_canvas_graph.canvas_graph_embed(
master=amp_frame, properties=graph_props.amp_canvas)
cv_graph = tkinter_canvas_graph.canvas_graph_embed(
master=cv_frame, properties=graph_props.cv_canvas)
cv_graph.pack(side='left', expand=True, fill=tk.BOTH)
self.graph = cv_graph
""" call a routine to make all the components to put in the notebook for cyclic voltammetry """
self.build_cv_notebook(cv_graph, cv_frame)
amp_graph.pack(expand=True, fill=tk.BOTH)
""" make a button to display connection settings and allow user to try to reconnect """
self.notebook.pack(side='top', expand=True, fill=tk.BOTH)
"""make the option menu"""
# self.build_option_menu()
option_menu.OptionMenu(self)
def make_graph_area(self, master, graph_props):
""" Make the graph area to display the cyclic voltammetry data. Use matplotlib if it is
available or else plot in a tk Canvas
TODO: add canvas option
:param master: tk.Tk overall master of the program
:param graph_props: dictionary fo properties on how the graph looks
:return: the graph object, currently a PyplotEmbed class from tkinter_pyplot
"""
if check_display_type() == 'matplotlib':
# current_lim = 1.2 * 1000. / master.device_params.adc_tia.tia_resistor
current_lim = master.device_params.adc_tia.current_lims
low_voltage = self.settings.low_voltage
high_voltage = self.settings.high_voltage
graph = tkinter_pyplot.PyplotEmbed(
master.frames[0],
# frame to put the toolbar in NOTE: hack, fix this
graph_props.cv_plot,
self,
current_lim,
low_voltage,
high_voltage)
else:
graph = None # TODO: implement for canvas
raise NotImplementedError
return graph
def make_graph(self, sweep_type, start_volt_type):
""" Make a graph of what the voltage versus time protocol looks like
:param sweep_type: str - 'LS' or 'CV' for a linear sweep or cyclic voltammetry
:param start_volt_type: str - 'Zero' or 'Start' for starting the protocol at zero volts or the starting voltage
"""
self.geometry("700x300")
blank_frame = tk.Frame() # holder for toolbar that is not needed
try:
start_volt = int(float(self.start_volt.get()))
end_volt = int(float(self.end_volt.get()))
rate = float(self.freq.get())
except:
return -1
low_voltage = min([start_volt, end_volt])
high_volt = max([start_volt, end_volt])
voltage_step = self.master.device_params.dac.voltage_step_size
ylims = [low_voltage, high_volt]
# make the voltage protocol, use the functions used by the cv_frame
self.data = cv_frame.make_x_line(start_volt,
end_volt, voltage_step, sweep_type, start_volt_type)
steps_per_second = rate * float(voltage_step)
total_time = len(self.data) * steps_per_second
time = [x * steps_per_second for x in range(len(self.data))]
plt_props = {'xlabel': "'time (msec)'",
'ylabel': "'voltage (mV)'",
'title': "'Voltage profile'",
'subplots_adjust': "bottom=0.15, left=0.12"}
self.graph = tkinter_pyplot.PyplotEmbed(blank_frame, plt_props, self, ylims, 0,
total_time)
self.graph.pack(side='left')
self.graph.simple_update_data(time, self.data)
def __init__(self, parent=None):
tk.Tk.__init__(self, parent)
self.color_index = 0
self.last_dir = None
self.display_type = 'decimated'
self.data = pyplot_data.PyplotData_v2(
) # make a list of panda data frames
# make menu bar
option_menu.OptionMenu(self)
# make frame to hold buttons to manipulate the data in
self.top_frame = tk.Frame(self, height=35)
self.top_frame.pack(side='top', fill=tk.X)
self.make_buttons(self.top_frame)
# make a second frame to hold button to manipulate data
print('1')
self.manipulation_frame = tk.Frame(self, height=35)
self.manipulation_frame.pack(side='top', fill=tk.X)
self.make_manipulate_buttons(self.manipulation_frame)
# make graph area to plot later
self.data_area = tkinter_pyplot.PyplotEmbed(self, self.data)
self.data_area.pack(side='top', expand=True, fill=tk.BOTH)
# make frame to show data statistics on the bottom
print('2')
self.bottom_frame = tk.Frame(self)
self.bottom_frame.pack(side='top', fill=tk.X)
self.data_info_frames = []
self.data_summary_frames = []
def make_graph_area(self, master, graph_props):
if check_display_type() == 'matplotlib':
current_lim = 1.2 * 1000. / master.device_params.adc_tia.tia_resistor
# 1's are not needed, the properties will override this
graph = tkinter_pyplot.PyplotEmbed(master, master.frames[1],
graph_props.amp_plot, self,
current_lim, 1, 1)
else:
graph = None # TODO: implement for canvas
return graph
def make_graph_area(self, master, graph_props):
""" Make the graph area to display the cyclic voltammetry data. Use matplotlib if it is
available or else plot in a tk Canvas
TODO: Merge this with CV frame so it works better
:param master: tk.Tk overall master of the program
:param graph_props: dictionary fo properties on how the graph looks
:return: the graph object, currently a PyplotEmbed class from tkinter_pyplot
"""
current_lim = master.device_params.adc_tia.current_lims
low_voltage = master.device_params.asv_settings.low_voltage
high_voltage = master.device_params.asv_settings.high_voltage
graph = tkinter_pyplot.PyplotEmbed(
master.frames[0],
# frame to put the toolbar in NOTE: hack, fix this
graph_props.cv_plot,
self,
current_lim,
low_voltage,
high_voltage)
return graph