def statusJob(jc):
"""A"""
out, err = 'statusjob.out', 'statusjob.err'
jobid_out = 'jobid'
if os.path.exists(out): os.remove(out)
if os.path.exists(err): os.remove(err)
if not os.path.exists(jobid_out):
print 'Cannot find jobid file: %s' % jobid
command = 'edg-job-status -i %s 1>>%s 2>>%s' % (jobid_out, out, err)
tklog.system(command, agtlog)
job_id = ''
job_status = ''
job_ce = ''
output = open(out, 'r')
re_jobid = re.compile('^Status info for the Job :\s*([^\s]+)')
re_status = re.compile('^Current Status:\s*(\w+)')
re_ce = re.compile('^Destination:\s*([^\s]+)')
for line in output.readlines():
if line.startswith('#'): continue
line = line[:-1]
mg1 = re_jobid.match(line)
mg2 = re_status.match(line)
mg3 = re_ce.match(line)
if mg1: job_id = mg1.group(1)
if mg2: job_status = mg2.group(1)
if mg3: job_ce = mg3.group(1)
output.close()
bbb = os.path.basename(os.getcwd())
print 'Status of job %s : %s (CE=%s)' % (bbb, job_status, job_ce)
return job_status
def update(self, tag):
if self.isValidName(self.Name) and \
self.isValidName(self.TemplateName) and \
self.isValidName(self.HooksName):
command = 'insert_in_tag.py -t "%s" %s %s %s' % \
(tag, self.TemplateName, self.Name, self.HooksName)
tklog.system(command, aatlog)
else:
print 'Name: ', self.isValidName(self.Name)
print 'TemplateName: ', self.isValidName(self.TemplateName)
print 'HooksName: ', self.isValidName(self.HooksName)
def getJob(jc):
"""A"""
jobid_out = 'jobid'
jobid = os.path.basename(os.getcwd())
if not os.path.exists(jobid_out):
print 'Cannot find jobid file: %s' % jobid
if statusJob(jc) == 'Done':
print 'Retrieving output of job %s' % jobid
out, err = 'getjob.out', 'getjob.err'
if os.path.exists(out): os.remove(out)
if os.path.exists(err): os.remove(err)
command = 'edg-job-get-output -i %s -dir . 1>>%s 2>>%s' % \
(jobid_out, out, err)
(status, output) = tklog.system(command, agtlog)
if status != 0:
print 'Error while getting job output. Check output at %s' % out
return
output = open(out, 'r')
check_it = False
dir = ''
for line in output.readlines():
line = line[:-1]
if check_it:
dir = line.strip()
check_it = False
break
elif line.find('have been successfully retrieved and stored') >= 0:
check_it = True
continue
if len(dir) > 0:
print ' --> Job output stored in directory %s' % dir
def statusJob(jc):
"""A"""
out, err = 'statusjob.out', 'statusjob.err'
jobid_out = 'jobid'
command = 'bjobs'
(status, output) = tklog.system(command, altlog)
sys.stdout.write(output)
sys.stdout.flush()
def runJob(jc):
"""A"""
out, err = 'runjob.out', 'runjob.err'
jobid_out = 'jobid'
jobid = jobID()
print 'Submitting job %s' % jobid
command = 'athena.py %s 1>>%s 2>>%s' % (jc.JobOptions.name(), out, err)
(status, output) = tklog.system(command, altlog)
def runJob(jc):
"""A"""
out, err = 'runjob.out', 'runjob.err'
jobid_out = 'jobid'
print 'Submitting job %s' % (os.path.basename(os.getcwd()))
if os.path.exists(out): os.remove(out)
if os.path.exists(err): os.remove(err)
if os.path.exists(jobid_out):
os.system('cat %s >> %s.sav' % (jobid_out, jobid_out))
os.remove(jobid_out)
# print 'Submitting job %s to CE=%s' % (bbb)
command = 'edg-job-submit --vo atlas -o %s %s 1>>%s 2>>%s' % \
(jobid_out, jc.JdlFile.name(), out, err)
if jc.JobType.name():
if os.path.exists(jc.RunScript.name()):
os.chmod(jc.RunScript.name(), 0744)
command = '%s 1>>%s 2>>%s &' % (jc.RunScript.name(), out, err)
else:
return
(status, output) = tklog.system(command, agtlog)
if status != 0:
print '*** Error while submitting job %s. Check the output %s/%s' %\
(os.path.basename(os.getcwd()), os.getcwd(), out)