def test_single_hmm_without_id_read(path):
test_dict_list = list(HMM.read(os.path.join(path, TEST_FILE_WITHOUT_ID)))
assert len(test_dict_list) == 1
test_dict = test_dict_list[0]
compare_carcinustatin(test_dict)
assert test_dict[ID_KEY_NAME] is None
def test_single_hmm_without_id_read(path):
test_dict_list = list(HMM.read(os.path.join(path, TEST_FILE_WITHOUT_ID)))
assert len(test_dict_list) == 1
test_dict = test_dict_list[0]
compare_carcinustatin(test_dict)
assert test_dict[ID_KEY_NAME] is None
def test_single_hmm_with_wrong_query_read(path):
test_dict_list = list(
HMM.read(os.path.join(path, TEST_FILE_WITH_ID),
id=WRONG_CARCINUSTATIN_ID))
assert len(test_dict_list) == 0
def test_single_hmm_no_id_with_query_read(path):
test_dict_list = list(
HMM.read(os.path.join(path, TEST_FILE_WITHOUT_ID),
id=CARCINUSTATIN_ID))
assert len(test_dict_list) == 0
def test_single_hmm_with_wrong_query_read(path):
test_dict_list = list(HMM.read(os.path.join(path, TEST_FILE_WITH_ID),
id=WRONG_CARCINUSTATIN_ID))
assert len(test_dict_list) == 0
def test_single_hmm_no_id_with_query_read(path):
test_dict_list = list(HMM.read(os.path.join(path, TEST_FILE_WITHOUT_ID),
id=CARCINUSTATIN_ID))
assert len(test_dict_list) == 0