def test_set_monitor_equation(self):
self.sess_mock['tau_s'] = '0.8'
self.sess_mock['tau_f'] = '0.4'
self.sess_mock['k_1'] = '5.6'
self.sess_mock['V_0'] = '0.02'
self.session_stored_simulator.monitors = [Bold()]
self.session_stored_simulator.monitors[
0].equation = FirstOrderVolterra()
with patch('cherrypy.session', self.sess_mock, create=True):
common.add2session(common.KEY_SIMULATOR_CONFIG,
self.session_stored_simulator)
common.add2session(common.KEY_BURST_CONFIG,
BurstConfiguration(self.test_project.id))
self.simulator_controller.set_monitor_equation(
'Bold', **self.sess_mock._data)
assert self.session_stored_simulator.monitors[0].equation.parameters[
'tau_s'] == 0.8, "tau_s value was not set correctly."
assert self.session_stored_simulator.monitors[0].equation.parameters[
'tau_f'] == 0.4, "tau_f value was not set correctly."
assert self.session_stored_simulator.monitors[0].equation.parameters[
'k_1'] == 5.6, "k_1 value was not set correctly."
assert self.session_stored_simulator.monitors[0].equation.parameters[
'V_0'] == 0.02, "V_0 value was not set correctly."
def test_set_bold_monitor_params(self):
self.sess_mock['period'] = '2000.0'
self.sess_mock['variables_of_interest'] = ''
self.sess_mock['equation'] = 'HRF kernel: Volterra Kernel'
self.session_stored_simulator.monitors = [Bold()]
with patch('cherrypy.session', self.sess_mock, create=True):
common.add2session(common.KEY_SIMULATOR_CONFIG, self.session_stored_simulator)
self.simulator_controller.set_monitor_params(**self.sess_mock._data)
assert self.session_stored_simulator.monitors[0].period == 2000.0, "Period was not set correctly."
assert self.session_stored_simulator.monitors[0].variables_of_interest is None, \
"Variables of interest should have not been added."
def test_set_bold_monitor_params(self):
self.session_stored_simulator.model.variables_of_interest = ('V', 'W', 'V - W')
variable_of_interest_indexes = {'W': 1, 'V - W': 2}
self.sess_mock['variables_of_interest'] = list(variable_of_interest_indexes.keys())
self.sess_mock['period'] = '2000.0'
self.sess_mock['hrf_kernel'] = 'HRF kernel: Volterra Kernel'
self.session_stored_simulator.monitors = [Bold()]
with patch('cherrypy.session', self.sess_mock, create=True):
common.add2session(common.KEY_SIMULATOR_CONFIG, self.session_stored_simulator)
self.simulator_controller.set_monitor_params('Bold', **self.sess_mock._data)
assert self.session_stored_simulator.monitors[0].period == 2000.0, "Period was not set correctly."
assert list(self.session_stored_simulator.monitors[0].variables_of_interest) == \
list(variable_of_interest_indexes.values()), "Variables of interest were not set correctly."