def on_save_fig(self, e=None):
path = FileDialogs.save_file_dialog()
base, ext = os.path.splitext(path)
#self.init()
#self.save_fig(base,ext)
for i in range(0, len(self.datalist)):
self.on_next(None)
self.save_fig(base, ext)
def on_save_common_masses(self, e):
outdata = self.commonmassespanel.list.get_list()
cmfilename = FileDialogs.save_file_dialog("Save Common Masses File",
"*.csv*",
self.config.masstablefile)
if cmfilename is not None:
np.savetxt(cmfilename, outdata, delimiter=",", fmt="%s")
print("Saving Common Masses to:", cmfilename)
def on_save_fig_dialog(self, evt):
"""
Open a save figure dialog for specified plot.
:param evt: wx.Event (unused)
:return: None
"""
path = FileDialogs.save_file_dialog()
if path is not None:
self.save_figure(path)
def auto(self, evt=None, file_path=None):
if file_path is None:
file_path = FileDialogs.save_file_dialog("Save File As", "*.hdf5")
filtered_lines = []
if file_path is not None:
cols, data = self.my_grid.get_data()
meta_data_importer.auto_from_wizard(data, file_path,
self.rb.GetSelection())
def on_write_dialog(self, evt):
"""
Open a save figure dialog for specified plot.
:param evt: wx.Event (unused)
:return: None
"""
if self.data is not None:
path = FileDialogs.save_file_dialog()
if path is not None:
self.write_data(path)
else:
print(
"Data object empty. Plot likely unsupported for text file output."
)
def export_file(self, evt):
'''
Export import file for later import
'''
file_path = FileDialogs.save_file_dialog(message="Save Import CSV File", file_types="CSV (*.csv)|*.csv")
max_index = self.my_grid.next_free_row()
if file_path != None and max_index > 0:
if file_path[-17:] != '_ionMS_import.csv' and file_path[-4:] != '.csv':
file_path += '_ionMS_import.csv'
f = open(file_path, 'w')
# get im type
if self.rb.GetSelection() == 0:
f.writelines('ionMS import wizard,Linear,\n')
elif self.rb.GetSelection() == 2:
f.writelines("ionMS import wizard,MS,\n")
elif self.rb.GetSelection() == 3:
f.writelines("ionMS import wizard,MS Times,\n")
else:
f.writelines('ionMS import wizard,T-wave,\n')
index = -1
while True:
# get column labels
cols = self.my_grid.column_labels()
index += 1
if index == max_index:
break
if index == 0:
# write column labels
tmp = ''
for c in cols:
tmp += '%s,' % cols[c]
f.writelines(tmp[:-1] + '\n')
# write out user import list
tmp = ''
for c in cols:
tmp += '%s,' % self.my_grid.GetCellValue(index, c)
f.writelines(tmp[:-1] + '\n')
# don't forget to close the file
f.close()
return file_path # + '_ionMS_import.csv'
def export_file(self, evt):
'''
Export import file for later import
'''
file_path = FileDialogs.save_file_dialog(
message="Save Import CSV File", file_types="CSV (*.csv)|*.csv")
max_index = self.my_grid.next_free_row()
if file_path != None and max_index > 0:
if file_path[-17:] != '_import.csv' and file_path[-4:] != '.csv':
file_path += '_import.csv'
cols, data = self.my_grid.get_data()
f = open(file_path, 'w')
# Write Type at the Top
if self.rb.GetSelection() == 0:
f.writelines('MetaUniDec Import Wizard,Time,\n')
elif self.rb.GetSelection() == 1:
f.writelines("MetaUniDec Import Wizard,Scans,\n")
# Write Column Values
tmp = ''
for c in cols:
tmp += '%s,' % cols[c]
f.writelines(tmp[:-1] + '\n')
# Write Data
for i, a in enumerate(data):
for j, l in enumerate(a):
f.write(str(l) + ",")
f.write('\n')
# close the file
f.close()
return file_path
