def profile(request):
if request.POST:
user = User.objects.get(id=request.user.id)
user_profile, created = UserProfile.objects.get_or_create(user=request.user)
if request.POST.get('payment_paypal', '') == "checked":
user_profile.payment_service = "paypal"
else:
user_profile.payment_service = "wepay"
user_profile.payment_service_email = request.POST.get('payment_service_email', '')
save = False
try:
if user.username != request.POST.get('username', ''):
user.username = request.POST.get('username', '')
save = True
if user.email != request.POST.get('email', ''):
user.email = request.POST.get('email', '')
save = True
if request.POST.get('password', ''):
algo = 'sha1'
salt = get_hexdigest(algo, str(random.random()), str(random.random()))[:5]
hsh = get_hexdigest(algo, salt, request.POST.get('password', ''))
user.password = '******' % (algo, salt, hsh)
save = True
if save:
user.save()
except Exception, e:
return HttpResponse("{error}".format(error=e))
user_profile.save()
return HttpResponse("Your profile has been saved")
def set_password(self, raw_password):
"""Sets the user's password - always use this rather than directly
assigning to :attr:`~mongoengine.django.auth.User.password` as the
password is hashed before storage.
"""
algo = 'sha1'
salt = get_hexdigest(algo, str(random()), str(random()))[:5]
hash = get_hexdigest(algo, salt, raw_password)
self.password = '******' % (algo, salt, hash)
self.save()
return self
def set_password(self, raw_password):
"""Sets the user's password - always use this rather than directly
assigning to :attr:`~mongoengine.django.auth.User.password` as the
password is hashed before storage.
"""
algo = 'sha1'
salt = get_hexdigest(algo, str(random()), str(random()))[:5]
hash = get_hexdigest(algo, salt, raw_password)
self.password = '******' % (algo, salt, hash)
self.save()
return self
def check_password(raw_password, enc_password):
"""
Returns a boolean of whether the raw_password was correct. Handles
encryption formats behind the scenes.
"""
algo, salt, hsh = enc_password.split('$')
return hsh == utils.get_hexdigest(algo, salt, raw_password)
def check_password(self, raw_password):
"""Checks the user's password against a provided password - always use
this rather than directly comparing to
:attr:`~mongoengine.django.auth.User.password` as the password is
hashed before storage.
"""
algo, salt, hash = self.password.split('$')
return hash == get_hexdigest(algo, salt, raw_password)
def check_password(self, raw_password):
"""Checks the user's password against a provided password - always use
this rather than directly comparing to
:attr:`~mongoengine.django.auth.User.password` as the password is
hashed before storage.
"""
algo, salt, hash = self.password.split('$')
return hash == get_hexdigest(algo, salt, raw_password)
def check_password(self, raw_password):
"""
Returns a boolean of whether the raw_password was correct. Handles
encryption formats behind the scenes.
"""
# Backwards-compatibility check. Older passwords won't include the
# algorithm or salt.
if '$' not in self.password:
is_correct = (self.password == utils.get_hexdigest('md5', '', raw_password))
if is_correct:
# Convert the password to the new, more secure format.
self.set_password(raw_password)
self.put()
return is_correct
return check_password(raw_password, self.password)
def create_db(system_password):
"Create the database and load the designs and the 'system' account."
site = configuration.site
server = couchdb.Server(site.COUCHDB_SERVER)
db = server.create(site.COUCHDB_DATABASE)
utils.load_designs(db)
doc = utils.load_document(db,
'account',
identifier='system',
role='admin',
password=utils.get_hexdigest(system_password),
fullname='System',
initials='SYS')
utils.load_document(db,
'log',
docid=doc['_id'],
action='created',
account='system')
utils.load_document(db,
'system',
identifier='settings',
project_steps=[
"contract",
"QC incoming samples",
"queued",
"library prep",
"qPCR",
"SOLiD WFA",
"454 titration",
"amplification",
"sequencing",
"data transfer",
"data analysis",
"data delivery",
"invoice",
"payment"
],
project_references=[
"hg19",
"other",
"unknown"
],
project_platforms=[
"Illumina Hiseq",
"SOLiD",
"GS-FLX"
],
project_applications=[
"total RNA",
"small RNA",
"MP de novo",
"MP metagenomics",
"custom sequence capture",
"metagenomics",
"exome sequencing",
"de novo",
"WGS",
"ChipSeq",
"epigenomics",
"finished library"
],
project_lab_protocols=[
"DNA standard",
"total RNA",
"small RNA",
"mate pair",
"sequence capture"
],
project_sequencing_setups=[
"Illumina PE 2*100",
"Illumina PE 2*50",
"Illumina SR 1*100",
"Illumina SR 1*50",
"SOLiD 2*75",
"SOLiD 1*50",
"SOLiD 1*35",
"SOLiD 75+35",
"SOLiD 50+35",
"454 400",
"454 850"
],
sample_steps=[
"arrival",
"QC incoming",
"library prep",
"QC library prep",
"qPCR",
"sequencing",
"QC sequencing"
],
sample_types=[
"DNA",
"cDNA",
"total RNA",
"mRNA",
"small RNA",
"metagenomics",
"ChipSeq",
"epigenetics",
"library prep",
"captured library",
"other"
],
workset_steps=[
"designed",
"sequencing",
"clustering"
],
workset_types=[
"collection",
"plate",
"lane",
"flowcell"
]
)
