def main(fn, output_fn):
print("Reading in dataset")
data, classes = readDataset(fn)
print(len(data), " sequences found")
print("Found classes:", sorted(classes))
proc = Processor(classes, 2, 2, prefix=(1,3), affix=(2,1), hashes=2,
features=100000, stem=False, ohe=False)
yss = []
ryss = []
for Xs in data:
ys = [x['output'] for x in Xs]
yss.append(ys)
ryss.append([proc.encode_target(ys, i) for i in range(len(ys))])
rs = np.random.RandomState(seed=2016)
print("Starting KFolding")
y_trues, y_preds = [], []
fold_object = KFold(5, random_state=1)
for train_idx, test_idx in fold_object.split(data):
tr_X, tr_y = subset(data, yss, train_idx, rs)
test_data = subset(data, yss, test_idx, rs, False)
print("Training")
d = Dagger(proc, tr_X, tr_y, validation_set=test_data)
clf = d.train(10)
seq = Sequencer(proc, clf)
print("Testing")
y_true, y_pred = test(data, ryss, test_idx, seq)
# print(y_true, y_pred, proc.labels)
print( classification_report(y_true, y_pred))
y_trues.extend(y_true)
y_preds.extend(y_pred)
print("Total Report")
print(classification_report(y_trues, y_preds, target_names=proc.labels))
print("Training all")
idxs = range(len(data))
tr_X, tr_y = subset(data, yss, idxs, rs)
d = Dagger(proc, tr_X, tr_y)
clf = d.train()
seq = Sequencer(proc, clf)
save(output_fn, seq)
import tensorflow as tf
import numpy as np
import os
import time
from tensorflow.python.framework import ops
from shutil import copyfile
import pvmdnn_model as model
import utils
# ======================================================================================================================
# Read the model settings (options) & Dataset
# Argument: 0 for training, 1 for testing (error regression, entrainment)
flag, dbs = utils.readDataset(1)
# ======================================================================================================================
# If the log_dir doesn't exist, make a directory and copy the setting file
# Make a directory and copy the setting file
isdir = os.path.exists(flag.log_dir)
if not isdir:
print 'Please check the log directory'
assert False
isdir = os.path.exists(flag.log_dir + "errorRegression")
if not isdir:
os.makedirs(flag.log_dir + "errorRegression")
copyfile('./settings.ini', flag.log_dir + 'errorRegression/' + 'settings.ini')
# Check the device (either CPU or GPU)
device_name = flag.device[0:4]
if device_name != '/cpu' and device_name != '/gpu':
print 'The device should be either cpu or gpu'
assert False
plt_trsv = np.mean(trains_svc, axis=0)
plt_tesv = np.mean(test_svc, axis=0)
ns = range(len(plt_teal))
plt.ylim = (0, 1)
plt.plot(ns, plt_tral, color="green")
plt.plot(ns, plt_teal, color="red")
plt.plot(ns, plt_trsv, color="blue")
plt.plot(ns, plt_tesv, color="black")
plt.show()
#iris = load_iris()
#X = iris['data']
X, Y = readDataset('dataset/data.json')
replace_dict = {'Objetivo': 2, 'Negativo': 0, 'Positivo': 3, "Neutro": 1}
Y = [replace_dict[y] for y in Y]
Y = np.array(Y)
X_features = doc2vecMatrix(X)
X = X_features
visualize_data(X, Y)
e1 = KNeighborsClassifier(n_neighbors=20)
e2 = SVC(kernel="linear", probability=True, gamma=0.001)
e3 = KNeighborsClassifier(n_neighbors=10)
e4 = SVC(kernel="rbf", probability=True, gamma=0.001)
e5 = GaussianNB() #SVC(kernel="rbf",probability=True,gamma="auto")
N_iter(X, Y, [e1, e2, e3, e4, e5])
def run(path, fname):
'''
if len(sys.argv) != 3:
print("Usage: python we_sensesim.py SenseEmbedding Datasets")
exit(0)
'''
wvs = utils.readWordVecs(sys.argv[1])
print("Finish reading vector!")
wvssen = {}
s_list = defaultdict(list)
for sense in wvs:
wvssen[sense.split("%")[0]] = ''
s_list[sense.split("%")[0]].append(sense)
mean_vector = np.mean(wvs.values(), axis=0)
spear_score_max = []
spear_score_avg = []
f_name = []
for name in fname:
filenames = os.path.join(path, name)
#full_path = os.path.join(path, name)
#filenames = os.path.expanduser(full_path).split(',')
pairs, scores = utils.readDataset(filename, no_skip=True)
coefs_max = []
coefs_avg = []
missing = 0
for pair in pairs:
vecs0 = []
trimed_p0 = trim(pair[0], wvssen)
if trimed_p0 not in wvssen:
vecs0.append(mean_vector)
missing += 1
else:
for sense in s_list[trimed_p0]:
vecs0.append(wvs[sense])
vecs1 = []
trimed_p1 = trim(pair[1], wvssen)
if trimed_p1 not in wvssen:
vecs1.append(mean_vector)
missing += 1
else:
for sense in s_list[trimed_p1]:
vecs1.append(wvs[sense])
'''
max_value and avg_value: see "Multi-Prototype Vector-Space Models of Word Meaning" section 3.2 Measuring Semantic Similarity
http://www.cs.utexas.edu/~ml/papers/reisinger.naacl-2010.pdf
'''
max_value = max([1 - cosine(a, b) for a in vecs0 for b in vecs1])
avg_value = np.mean(
[1 - cosine(a, b) for a in vecs0 for b in vecs1])
coefs_max.append(max_value)
coefs_avg.append(avg_value)
spear_max = spearmanr(scores, coefs_max)
pearson_max = pearsonr(scores, coefs_max)
spear_avg = spearmanr(scores, coefs_avg)
pearson_avg = pearsonr(scores, coefs_avg)
spear_score_max.append(spear_max[0])
spear_score_avg.append(spear_avg[0])
print 'type \t',
for i in range(len(fname)):
print fname[i],
print '\nspear max\t',
for i in range(len(fname)):
print '%.06f ' % (spear_score_max[i]),
print '\nspear avg\t',
for i in range(len(fname)):
print '%.06f ' % (spear_score_avg[i]),
def main(fn, sp):
print("Reading in dataset")
data, classes = readDataset(fn)
print(len(data), " sequences found")
print("Found classes:", sorted(classes))
proc = Processor(classes,
2,
2,
prefix=(1, 3),
affix=(2, 1),
hashes=2,
features=100000,
stem=False,
ohe=False)
print("Converting to features")
Xs, ys = [], []
sTime = time.time()
for i, d in enumerate(data):
if i % 100 == 0 and i:
print("Converted %s of %s: %s DPS" % (i, len(data), i /
(time.time() - sTime)))
X, y = [], []
trad = [x['output'] for x in d]
for i in range(len(d)):
X.append(proc.transform(d, trad, i))
y.append(proc.encode_target(trad, i))
Xs.append(X)
ys.append(y)
print("Starting KFolding")
rs = np.random.RandomState(seed=2016)
y_trues, y_preds = [], []
fold_object = KFold(5, random_state=1)
for train_idx, test_idx in fold_object.split(data):
tr_X, tr_y = build(Xs, ys, train_idx, rs)
print("Training")
clf = train(tr_X, tr_y)
seq = Sequencer(proc, clf)
print("Testing")
y_true, y_pred = test(data, ys, test_idx, seq)
print(classification_report(y_true, y_pred))
y_trues.extend(y_true)
y_preds.extend(y_pred)
print("Total Report")
print(classification_report(y_trues, y_preds))
print("Training all")
idxs = range(len(Xs))
tr_X, tr_y = build(Xs, ys, idxs, rs)
clf = train(tr_X, tr_y)
seq = Sequencer(proc, clf)
save(sp, seq)
from utils import readDataset, getSurgeryByPriority
import guloso
#criar variaveis de decisao
# Xcstd, yesd, z = utils.createDecisionVar(C, S, T, D, E)
S = 1
#ler dataset
dataset = readDataset('toy2.txt')
solucao = guloso.gerarSolucaoInicial(dataset, S)
priority1 = getSurgeryByPriority(dataset, 1)
# print(solucao)
for c in priority1:
print('----------\n\n')
print(solucao[c][0])
