def test_parse_04(self):
self.assertEqual(
OVARY_SIZE.parse(
"No tail pencil; Mam. gl. enl., 3 emb. L, 5 R. 1 "
"corpus lut in L ovary, 7 in R.; Enl[?] 8.1 x 3.5"),
[],
)
def test_parse_09(self):
self.assertEqual(
OVARY_SIZE.parse(
'"gonad length 1":"3.0", "gonad length 2":"2.0",'),
[
Trait(
value=3,
units=None,
units_inferred=True,
side="1",
dimension="length",
ambiguous_key=True,
start=1,
end=21,
),
Trait(
value=2,
units=None,
units_inferred=True,
side="2",
dimension="length",
ambiguous_key=True,
start=25,
end=45,
),
],
)
def test_parse_08(self):
self.assertEqual(
OVARY_SIZE.parse("ovaries = 8 mm"),
[
Trait(
value=8, units="mm", units_inferred=False, start=0, end=14)
],
)
def test_parse_02(self):
self.assertEqual(
OVARY_SIZE.parse("ovary < 1 x 1 mm"),
[
Trait(value=[1, 1],
units="mm",
units_inferred=False,
start=0,
end=16)
],
)
def test_parse_11(self):
self.assertEqual(
OVARY_SIZE.parse(
("reproductive data=Embryos "
"L:11x8mm, 12x8mm; R:10x9mm, 11x10mm. Nippl ; right "
"gonad length=3 mm; left gonad width=2 mm; right gonad "
"width=2 mm; left gonad length=3 mm")),
[
Trait(
value=3,
units="mm",
units_inferred=False,
side="right",
ambiguous_key=True,
dimension="length",
start=71,
end=94,
),
Trait(
value=2,
units="mm",
units_inferred=False,
side="left",
ambiguous_key=True,
dimension="width",
start=96,
end=117,
),
Trait(
value=2,
units="mm",
units_inferred=False,
side="right",
ambiguous_key=True,
dimension="width",
start=119,
end=141,
),
Trait(
value=3,
units="mm",
units_inferred=False,
side="left",
ambiguous_key=True,
dimension="length",
start=143,
end=165,
),
],
)
def test_parse_05(self):
self.assertEqual(
OVARY_SIZE.parse("moderate fat, scars 3R, 4L, no embryos "
"[right ovary listed, left ovary: 4 x 2 mm]"),
[
Trait(
value=[4, 2],
units="mm",
units_inferred=False,
side="left",
start=60,
end=80,
)
],
)
def test_parse_07(self):
self.assertEqual(
OVARY_SIZE.parse("ovaries: 20mm X 12mm, 18mm X 9mm."),
[
Trait(
value=[20, 12],
units=["mm", "mm"],
units_inferred=False,
start=0,
end=32,
),
Trait(
value=[18, 9],
units=["mm", "mm"],
units_inferred=False,
start=0,
end=32,
),
],
)
def test_parse_06(self):
self.assertEqual(
OVARY_SIZE.parse("Rt Ovary 2.0x3.5mm, Lft Ovary 2.1x4.0mm."),
[
Trait(
value=[2, 3.5],
units="mm",
units_inferred=False,
side="rt",
start=0,
end=18,
),
Trait(
value=[2.1, 4],
units="mm",
units_inferred=False,
side="lft",
start=20,
end=39,
),
],
)
def test_parse_10(self):
self.assertEqual(
OVARY_SIZE.parse('"gonadLengthInMM":"12", "gonadWidthInMM":"5",'),
[
Trait(
value=12,
units="MM",
units_inferred=False,
ambiguous_key=True,
dimension="length",
start=1,
end=21,
),
Trait(
value=5,
units="MM",
units_inferred=False,
ambiguous_key=True,
dimension="width",
start=25,
end=43,
),
],
)
def test_parse_03(self):
self.assertEqual(
OVARY_SIZE.parse("PIT tag #7F7D4D3A36 REMOVAL GRID #7 TRAP 1C"),
[])
def test_parse_12(self):
self.assertEqual(
OVARY_SIZE.parse(("reproductive data=Embryos "
"L:11x8mm, 12x8mm; R:10x9mm, 11x10mm. Nippl ;")),
[],
)