def update_annotation(old_obj, translate_dict):
new_dict = {"DBAnnotation": {"key": update_key}}
new_list = []
for annotation in old_obj.db_annotations:
if annotation.db_key == "notes":
new_list.append(DBAnnotation.update_version(annotation, new_dict))
else:
new_list.append(DBAnnotation.update_version(annotation, {}))
return new_list
def update_annotation(old_obj, translate_dict):
new_dict = {'DBAnnotation': {'key': update_key}}
new_list = []
for annotation in old_obj.db_annotations:
if annotation.db_key == 'notes':
new_list.append(
DBAnnotation.update_version(annotation, new_dict))
else:
new_list.append(DBAnnotation.update_version(annotation, {}))
return new_list
def update_annotation(old_obj, translate_dict):
new_dict = {'DBAnnotation': {'key': update_key}}
new_list = []
for annotation in old_obj.db_annotations:
if annotation.db_key == 'notes':
new_list.append(DBAnnotation.update_version(annotation,
new_dict))
else:
new_list.append(DBAnnotation.update_version(annotation,
{}))
return new_list
def translateVistrail(_vistrail):
vistrail = DBVistrail()
for _action in _vistrail.db_actions:
ops = []
for op in _action.db_operations:
if op.vtType == 'add':
data = convert_data(op.db_data)
ops.append(
DBAdd(id=op.db_id,
what=op.db_what,
objectId=op.db_objectId,
parentObjId=op.db_parentObjId,
parentObjType=op.db_parentObjType,
data=data))
elif op.vtType == 'change':
data = convert_data(op.db_data)
ops.append(
DBChange(id=op.db_id,
what=op.db_what,
oldObjId=op.db_oldObjId,
newObjId=op.db_newObjId,
parentObjId=op.db_parentObjId,
parentObjType=op.db_parentObjType,
data=data))
elif op.vtType == 'delete':
ops.append(
DBDelete(id=op.db_id,
what=op.db_what,
objectId=op.db_objectId,
parentObjId=op.db_parentObjId,
parentObjType=op.db_parentObjType))
annotations = []
for annotation in _action.db_annotations:
annotations.append(
DBAnnotation(id=annotation.db_id,
key=annotation.db_key,
value=annotation.db_value))
session = _action.db_session
if not session:
session = None
else:
session = long(_action.db_session)
action = DBAction(id=_action.db_id,
prevId=_action.db_prevId,
date=_action.db_date,
user=_action.db_user,
prune=_action.db_prune,
session=session,
operations=ops,
annotations=annotations)
vistrail.db_add_action(action)
for _tag in _vistrail.db_tags:
tag = DBTag(id=_tag.db_id, name=_tag.db_name)
vistrail.db_add_tag(tag)
vistrail.db_version = '0.9.3'
return vistrail
def convert_data(child):
if child.vtType == 'module':
return DBModule(id=child.db_id,
cache=child.db_cache,
name=child.db_name,
namespace=child.db_namespace,
package=child.db_package,
version=child.db_version,
tag=child.db_tag)
elif child.vtType == 'abstractionRef':
return DBAbstractionRef(id=child.db_id,
name=child.db_name,
cache=child.db_cache,
abstraction_id=child.db_abstraction_id,
version=child.db_version)
elif child.vtType == 'connection':
return DBConnection(id=child.db_id)
elif child.vtType == 'portSpec':
return DBPortSpec(id=child.db_id,
name=child.db_name,
type=child.db_type,
spec=child.db_spec)
elif child.vtType == 'function':
return DBFunction(id=child.db_id,
pos=child.db_pos,
name=child.db_name)
elif child.vtType == 'parameter':
return DBParameter(id=child.db_id,
pos=child.db_pos,
name=child.db_name,
type=child.db_type,
val=child.db_val,
alias=child.db_alias)
elif child.vtType == 'location':
return DBLocation(id=child.db_id,
x=child.db_x,
y=child.db_y)
elif child.vtType == 'annotation':
return DBAnnotation(id=child.db_id,
key=child.db_key,
value=child.db_value)
elif child.vtType == 'port':
return DBPort(id=child.db_id,
type=child.db_type,
moduleId=child.db_moduleId,
moduleName=child.db_moduleName,
name=child.db_name,
spec=child.db_spec)
elif child.vtType == 'group':
return DBGroup(id=child.db_id,
workflow=child.db_workflow,
cache=child.db_cache,
name=child.db_name,
namespace=child.db_namespace,
package=child.db_package,
version=child.db_version,
tag=child.db_tag)