def setQuaternion(self, Quaternion):
"""Set the orientation of the body in world coordinates (the display object is oriented to match)."""
odelib.BaseBody.setQuaternion(self, Quaternion)
# now set the orientation of the display frame
# Rotating a point is q * (0,v) * q-1
# q-1 is w, -x, -y, -z assuming that q is a unit quaternion
w1, x1, y1, z1 = Quaternion
v1 = visual.vector(x1, y1, z1)
w3 = w1
v3 = -v1
# First do the axis vector
w2 = 0.0
v2 = visual.vector((1.0, 0.0, 0.0))
# This code is equivalent to a quaternion multiply: qR = q1 * q2 * q3
w12 = (w1 * w2) - visual.dot(v1, v2)
v12 = (w1 * v2) + (w2 * v1) + visual.cross(v1, v2)
wR = (w12 * w3) - visual.dot(v12, v3)
vR = (w12 * v3) + (w3 * v12) + visual.cross(v12, v3)
self._myFrame.axis = vR
# Do it again for the up vector
w2 = 0.0
v2 = visual.vector((0.0, 1.0, 0.0))
# This code is equivalent to a quaternion multiply: qR = q1 * q2 * q3
w12 = (w1 * w2) - visual.dot(v1, v2)
v12 = (w1 * v2) + (w2 * v1) + visual.cross(v1, v2)
wR = (w12 * w3) - visual.dot(v12, v3)
vR = (w12 * v3) + (w3 * v12) + visual.cross(v12, v3)
self._myFrame.up = vR
def setQuaternion(self, Quaternion):
"""Set the orientation of the body in world coordinates (the display object is oriented to match)."""
odelib.BaseBody.setQuaternion(self, Quaternion)
# now set the orientation of the display frame
# Rotating a point is q * (0,v) * q-1
# q-1 is w, -x, -y, -z assuming that q is a unit quaternion
w1, x1, y1, z1 = Quaternion
v1 = visual.vector(x1, y1, z1)
w3 = w1
v3 = -v1
# First do the axis vector
w2 = 0.0
v2 = visual.vector((1.0, 0.0, 0.0))
# This code is equivalent to a quaternion multiply: qR = q1 * q2 * q3
w12 = (w1 * w2) - visual.dot(v1, v2)
v12 = (w1 * v2) + (w2 * v1) + visual.cross(v1, v2)
wR = (w12 * w3) - visual.dot(v12, v3)
vR = (w12 * v3) + (w3 * v12) + visual.cross(v12, v3)
self._myFrame.axis = vR
# Do it again for the up vector
w2 = 0.0
v2 = visual.vector((0.0, 1.0, 0.0))
# This code is equivalent to a quaternion multiply: qR = q1 * q2 * q3
w12 = (w1 * w2) - visual.dot(v1, v2)
v12 = (w1 * v2) + (w2 * v1) + visual.cross(v1, v2)
wR = (w12 * w3) - visual.dot(v12, v3)
vR = (w12 * v3) + (w3 * v12) + visual.cross(v12, v3)
self._myFrame.up = vR
def GetElementWorldLocation(self, ElementKey):
"""Returns the location of the specified element in world coordinates."""
assert ElementKey in self._elementDict
self._elementDict.get(ElementKey).SetVisible(isVisible)
localPos = self.GetElement(ElementKey).pos
xAxis = visual.norm(self._myFrame.axis)
zAxis = visual.norm(visual.cross(self._myFrame.axis, self._myFrame.up))
yAxis = visual.norm(visual.cross(z_axis, x_axis))
worldPos = self._myFrame.pos + (localPos.x * xAxis) + (localPos.y * yAxis) + (localPos.z * zAxis)
return worldPos
def GetElementWorldLocation(self, ElementKey):
"""Returns the location of the specified element in world coordinates."""
assert ElementKey in self._elementDict
self._elementDict.get(ElementKey).SetVisible(isVisible)
localPos = self.GetElement(ElementKey).pos
xAxis = visual.norm(self._myFrame.axis)
zAxis = visual.norm(visual.cross(self._myFrame.axis, self._myFrame.up))
yAxis = visual.norm(visual.cross(z_axis, x_axis))
worldPos = self._myFrame.pos + (localPos.x * xAxis) + (
localPos.y * yAxis) + (localPos.z * zAxis)
return worldPos
def build(self, Verticies, Faces, Colors=None, Normals=None, IsSoft=False):
"""Build a displayable tri-mesh object. This is an overload of ode.TriMeshData.build()."""
# Fill out our TriMeshData object properties by calling the parent
ode.TriMeshData.build(self, Verticies, Faces)
self._verticies = []
self._colors = []
self._normals = []
# Expand the mesh to make it suitable for use with Visual
for face in Faces:
for index, vertex in enumerate(face):
self._verticies.append(Verticies[vertex])
if Colors is not None:
self._colors.append(Colors[vertex])
else:
# Assign a default
self._colors.append(visual.color.white)
if Normals is not None:
self._normals.append(Normals[vertex])
else:
# Compute the normals using cross products
normal = visual.norm(visual.cross(Verticies[face[index]], Verticies[face[(index + 1) % 3]]))
self._normals.append(normal)
if IsSoft:
# Need to go back and average normals -- implement later
pass
def build(self, Verticies, Faces, Colors=None, Normals=None, IsSoft=False):
"""Build a displayable tri-mesh object. This is an overload of ode.TriMeshData.build()."""
# Fill out our TriMeshData object properties by calling the parent
ode.TriMeshData.build(self, Verticies, Faces)
self._verticies = []
self._colors = []
self._normals = []
# Expand the mesh to make it suitable for use with Visual
for face in Faces:
for index, vertex in enumerate(face):
self._verticies.append(Verticies[vertex])
if Colors is not None:
self._colors.append(Colors[vertex])
else:
# Assign a default
self._colors.append(visual.color.white)
if Normals is not None:
self._normals.append(Normals[vertex])
else:
# Compute the normals using cross products
normal = visual.norm(
visual.cross(Verticies[face[index]],
Verticies[face[(index + 1) % 3]]))
self._normals.append(normal)
if IsSoft:
# Need to go back and average normals -- implement later
pass
def golfball_step(t,x,y,z,vx,vy,vz,m,g,B2,S0,w,dt,w_vector,v_vector):
t = t+dt
x = x + vx*dt
y = y + vy*dt
z = z + vz*dt
FM = (S0*visual.cross(w_vector,v_vector))/m
#vz = vz + (Fmz/m)*dt
vz = vz + FM.z*dt#((S0*w*vx)*dt)
v = math.sqrt((vx**2)+(vy**2)+(vz**2))
vx = vx - (((B2*v*vx)/m)*dt) + FM.x*dt#((S0*w*vy)*dt)
vy = vy - g*dt - (((B2*v*vy)/m)*dt) + FM.y*dt#((S0*w*vz)*dt)
return t,x,y,z,vx,vy,vz
def go(animate=True): # default: True
r, v = np.array([0.4667, 0.0]), np.array([0.0, 8.198]) # init r, v
t, h, ta, angle = 0.0, 0.002, [], []
w = 1.0 / vp.mag(r) # $W_0=\Omega(r)$
if (animate): planet, info, RLvec = set_scene(r)
while t < 100: # run for 100 years
L = vp.cross(r, v) # $\vec{L}/m=\vec{r}\times \vec{v}$
A = vp.cross(v, L) - GM * r / vp.mag(r) # scaled RL vec,
ta.append(t)
angle.append(np.arctan(A.y / A.x) * 180 * 3600 / np.pi) # arcseconds
if (animate):
vp.rate(100)
planet.pos = r # move planet
RLvec.axis, RLvec.length = A, .25 # update RL vec
info.text = 'Angle": %8.2f' % (angle[-1]) # angle info
r, v, t, w = ode.leapfrog_tt(mercury, r, v, t, w, h)
plt.figure() # make plot
plt.plot(ta, angle)
plt.xlabel('Time (year)'), plt.ylabel('Precession (arcsec)')
plt.show()
def go(animate = True): # default: True
r, v = np.array([0.4667, 0.0]), np.array([0.0, 8.198]) # init r, v
t, h, ta, angle = 0.0, 0.002, [], []
w = 1.0/vp.mag(r) # $W_0=\Omega(r)$
if (animate): planet, info, RLvec = set_scene(r)
while t<100: # run for 100 years
L = vp.cross(r, v) # $\vec{L}/m=\vec{r}\times \vec{v}$
A = vp.cross(v, L) - GM*r/vp.mag(r) # scaled RL vec,
ta.append(t)
angle.append(np.arctan(A.y/A.x)*180*3600/np.pi) # arcseconds
if (animate):
vp.rate(100)
planet.pos = r # move planet
RLvec.axis, RLvec.length = A, .25 # update RL vec
info.text='Angle": %8.2f' %(angle[-1]) # angle info
r, v, t, w = ode.leapfrog_tt(mercury, r, v, t, w, h)
plt.figure() # make plot
plt.plot(ta, angle)
plt.xlabel('Time (year)'), plt.ylabel('Precession (arcsec)')
plt.show()
def vs_loop():
#pan_inc = 0.25
#zoom_inc = array((0.25,0.25,0.25))
pan_inc = 0.25
zoom_inc = array((0.05, 0.05, 0.05))
# for scene rotation with invariant light direction
light_frame = vs.frame()
for obj in vs.scene.lights:
if isinstance(obj, vs.distant_light):
obj.frame = light_frame # put distant lights in a frame
prev_scene_forward = vs.vector(
vs.scene.forward) # keep a copy of the old forward
while True:
if vs.scene.kb.keys:
key = vs.scene.kb.getkey()
if key == 'up':
vs.scene.center = array(vs.scene.center) + array(
(0, pan_inc, 0))
elif key == 'down':
vs.scene.center = array(vs.scene.center) + array(
(0, -pan_inc, 0))
elif key == 'left':
vs.scene.center = array(vs.scene.center) + array(
(-pan_inc, 0, 0))
elif key == 'right':
vs.scene.center = array(vs.scene.center) + array(
(pan_inc, 0, 0))
elif key == 'shift+up':
vs.scene.range -= zoom_inc
elif key == 'shift+down':
vs.scene.range += zoom_inc
if vs.scene.forward != prev_scene_forward:
new = vs.scene.forward
axis = vs.cross(prev_scene_forward, new)
angle = new.diff_angle(prev_scene_forward)
light_frame.rotate(axis=axis, angle=angle)
prev_scene_forward = vs.vector(new)
def ball_step(x,y,z,vx,vy,vz,g,ball,S0,w_vector,dt):
v_vector = visual.vector(vx,vy,vz) #Defines velocity vector based on components
FM = S0 * visual.cross(w_vector,v_vector) / ball.mass #Finds acceleration from Magnus Force
x = x + vx*dt
y = y + vy*dt #Alters the position
z = z + vz*dt
vz = vz + FM.z*dt #Changes vz based on the Magnus acceleration in the Z direction
v = v_vector.mag #defines v as the magnitude of the velocity vector for use below
vx = vx - (((ball.drag*v*vx)/ball.mass)*dt) + FM.x*dt #updates x component of velocity
vy = vy - 9.8*dt - (((ball.drag*v*vy)/ball.mass)*dt)# + FM.y*dt #updates y component of velocity
'''This is where I believe my problem exists. I cannot figure out why the other two velocities are altered by the
effect of the magnus force, but in this equation, y is not being altered at least noticeably.'''
return x,y,z,vx,vy,vz
def vs_loop():
#pan_inc = 0.25
#zoom_inc = array((0.25,0.25,0.25))
pan_inc = 0.25
zoom_inc = array((0.05,0.05,0.05))
# for scene rotation with invariant light direction
light_frame = vs.frame()
for obj in vs.scene.lights:
if isinstance(obj, vs.distant_light):
obj.frame = light_frame # put distant lights in a frame
prev_scene_forward = vs.vector(vs.scene.forward) # keep a copy of the old forward
while True:
if vs.scene.kb.keys:
key = vs.scene.kb.getkey()
if key == 'up':
vs.scene.center = array(vs.scene.center) + array((0,pan_inc,0))
elif key == 'down':
vs.scene.center = array(vs.scene.center) + array((0,-pan_inc,0))
elif key == 'left':
vs.scene.center = array(vs.scene.center) + array((-pan_inc,0,0))
elif key == 'right':
vs.scene.center = array(vs.scene.center) + array((pan_inc,0,0))
elif key == 'shift+up':
vs.scene.range -= zoom_inc
elif key == 'shift+down':
vs.scene.range += zoom_inc
if vs.scene.forward != prev_scene_forward:
new = vs.scene.forward
axis = vs.cross(prev_scene_forward, new)
angle = new.diff_angle(prev_scene_forward)
light_frame.rotate(axis=axis, angle=angle)
prev_scene_forward = vs.vector(new)
def drawThumbPattern(pattern, i, gc, l, m, length):
faces = pattern.faces
center = vector(m * (i + 1) + l * (i + 1 / 2.0), l / 2 + m, 0)
for face in faces:
edge1 = face.vertices[1].coords - face.vertices[0].coords
edge2 = face.vertices[-1].coords - face.vertices[0].coords
if cross(edge1, edge2).z > 0: # the angle from edge1 to 2 is negative
gc.SetBrush(wx.Brush('white'))
else:
gc.SetBrush(wx.Brush('yellow'))
path = gc.CreatePath()
for i in range(len(face.vertices)):
vertex = face.vertices[i]
coords = vector(vertex.coords.x, -vertex.coords.y)
length = 100 # from center of the origami to a vertex
vPosition = center + coords / length * l / 2
if i == 0:
path.MoveToPoint(vPosition.x, vPosition.y)
else:
path.AddLineToPoint(vPosition.x, vPosition.y)
path.CloseSubpath()
gc.DrawPath(path)
def cross(self, other):
temp = cross(self.v, other.v)
return Vector((temp.x, temp.y, temp.z))
S_LENGTH_LABEL = vp.label(pos=S_LENGTH.pos, text="Fix Length", yoffset=-5,
opacity=0, box=0, line=0)
S_TEXT = vp.label(pos=(0, 12, 0), text="Yellow = Red x Green",
opacity=0, box=0, line=0)
FIXLENGTH = 0
FIXTHETA = 0
AVECTOR = vp.array([0, 0, -3.5])
BVECTOR = vp.vector(0, 3, 2)
A = vp.arrow(pos=(0, 0, 0), shaftwidth=R, color=vp.color.red)
B = vp.arrow(pos=(0, 0, 0), axis=BVECTOR, shaftwidth=R, color=vp.color.green)
A.axis = AVECTOR
CVECTOR = vp.cross(AVECTOR, BVECTOR)
C = vp.arrow(pos=(0, 0, 0), axis=CVECTOR, shaftwidth=R, color=vp.color.yellow)
vp.scene.autoscale = 0
vp.scene.forward = (-1, -.5, -1)
DRAG = 0
while True:
vp.rate(100)
if vp.scene.mouse.events:
M = vp.scene.mouse.getevent()
if M.drag:
DRAG = True
OBS = None
elif M.drop:
def bdipole(r): # calc magnetic fields at $\vec{r}$
b, rel = vp.vector(0, 0, 0), r - rs
for i in range(len(ds)): # sum over segments
b += vp.cross(ds[i], rel[i]) / vp.mag(
rel[i])**3 # $\sum Id\vec{s}\times \vec{r}/r^3$
return b
def baseball(Y, t): # Y = [r, v] assumed
v = Y[1]
fm = alpha * vp.cross(omega, v) # Magnus force
a = (fm - b2 * vp.mag(v) * v) / mass - [0, g, 0] # minus g-vec
return np.array([v, a]) # np array
up=ex*np.cos(j)*rr+ey*np.sin(j)*rr+ez*(0)+center
up=up.rotate(angle=r1data[k][0],axis=r1data[k][1])
up=up.rotate(angle=r2data[k][0],axis=r2data[k][1])
L.append((up.x,up.y,up.z))
down=ex*np.cos(j)*rru+ey*np.sin(j)*rru+ez*(h)+center
down=down.rotate(angle=r1data[k][0],axis=r1data[k][1])
down=down.rotate(angle=r2data[k][0],axis=r2data[k][1])
L.append((down.x,down.y,down.z))
# if up.x>0:
# continue
hexagon.pos = L
#ball=vs.sphere(pos=(0,0,0),radius=17.5)
#fig = plt.figure()
#ax = fig.add_subplot(111, projection='3d')
##ax.plot(xx,yy,zz,".")
#ax.scatter(x,y,z,color="g",s=100)
#ax.set_xlabel('x')
#ax.set_ylabel('y')
#ax.set_zlabel('z')
#plt.show()
#for i in range(len(x)):
# print x[i],y[i],z[i]
while 1:
vs.rate(50)
if vs.scene.forward != old:
new = vs.scene.forward
axis = vs.cross(old,new)
angle = new.diff_angle(old)
lframe.rotate(axis=axis, angle=angle)
old = vs.vector(new)
def cross(self, other):
temp = cross(self.v, other.v)
return Vector((temp.x, temp.y, temp.z))
def angular_momentum(self, pos = vector()): return cross(self.pos - pos, self.momentum)
scene = vp.display(title='Electric dipole', background=(.2,.5,1),
forward=(0,-1,-.5), up=(0,0,1))
zaxis = vp.curve(pos=[(0,0,-r),(0,0,r)])
qpos = vp.sphere(pos=(0,0,.02), radius=0.01, color=(1,0,0))
qneg = vp.sphere(pos=(0,0,-.02), radius=0.01, color=(0,0,1))
c1 = vp.ring(pos=(0,0,0), radius=r, axis=(0,0,1), thickness=0.002)
c2 = vp.ring(pos=(0,0,0), radius=r, axis=(0,1,0), thickness=0.002)
theta, phi = np.linspace(0, np.pi, m), np.linspace(0, 2*np.pi, n) # grid
phi, theta = vp.meshgrid(phi, theta)
rs = r*np.sin(theta)
x, y, z = rs*np.cos(phi), rs*np.sin(phi), r*np.cos(theta) # coord.
for i in range(m):
for j in range(n):
rvec = vp.vector(x[i,j], y[i,j], z[i,j])
B = scale*vp.cross(rvec, vp.vector(0,0,1))/(r*r) # $\vec{r}\times \hat z/r^2$
E = vp.cross(B, rvec)/r # $\vec{B}\times \vec{r}/r$
vp.arrow(pos=rvec, axis=E, length=vp.mag(E), color=(1,1,0))
vp.arrow(pos=rvec, axis=B, length=vp.mag(B), color=(0,1,1))
def moment(point, end1, end2=vector(0, 0, 0)):
'''Returns the moment defined as the distance between a point
and a line formed by two endpoints, end1 and end2.
All points must be given as 3d vectors'''
return mag(cross(point - end2, point - end1)) / \
mag(end1 - end2)
rhatR = arrow(pos = P, axis = (P[0]-sourceR[0],P[1]-sourceR[1],P[2]-sourceR[2]),\
length=0.2, shaftwidth = 0.02, color = color.red)
rhatL = arrow(pos= P, axis = (P[0]-sourceL[0],P[1]-sourceL[1],P[2]-sourceL[2]), \
length = 0.2 , shaftwidth = 0.02, color=color.blue)
# Decide the direction of the current dl (CCW from the top)- at the location of the right infinitestimal
# it is dlR
dlR = vector(0, 0, -1)
RVec = vector(P[0] - sourceR[0], P[1] - sourceR[1], P[2] - sourceR[2])
# Use Biot-Savart to calculate the infinitesimal contribution to the magnetic field
# by one of the two infinitesimals
dbR = arrow(pos=P,
axis=cross(dlR, RVec),
length=0.2,
shaftwidth=0.02,
color=(1, 0.7, 0))
# Same calculation for the symmetric infinitesimal
dlL = vector(0, 0, 1)
LVec = vector(P[0] - sourceL[0], P[1] - sourceL[1], P[2] - sourceL[2])
dbL = arrow(pos=P,
axis=cross(dlL, LVec),
length=0.2,
shaftwidth=0.02,
color=(0, 0.7, 1))
def Simulation():
config.Atoms = [] # spheres
p = [] # momentums (vectors)
apos = [] # positions (vectors)
ampl = 0 #амплитуда движения
period = 5
k = 1.4E-23 # Boltzmann constant
R = 8.3
dt = 1E-5
time = 0
def checkCollisions(Natoms, Ratom):
hitlist = []
r2 = 2 * Ratom
for i in range(Natoms):
for j in range(i):
dr = apos[i] - apos[j]
if dr.mag < r2:
hitlist.append([i, j])
return hitlist
def speed(time, piston_mode, period, ampl, temp):
if (piston_mode == 0):
return 0
if (piston_mode == 1):
return ampl / 10 * 3 * sin(time / period * 2 * pi) * sqrt(
3 * config.mass * k * temp) / (5 * config.mass) / period * 100
if (piston_mode == 2):
if (time % period < period // 2):
return 1.5 * ampl / 10 * sqrt(3 * config.mass * k * temp) / (
5 * config.mass) / period * 100
else:
return -1.5 * ampl / 10 * sqrt(3 * config.mass * k * temp) / (
5 * config.mass) / period * 100
if (piston_mode == 3):
if (time % period < period // 5):
return 5 * ampl / 10 * sqrt(3 * config.mass * k * temp) / (
5 * config.mass) / period * 100
else:
return -5 / 4 * ampl / 10 * sqrt(
3 * config.mass * k * temp) / (5 *
config.mass) / period * 100
if (piston_mode == 4):
if (time % period < 4 * period // 5):
return 5 / 4 * ampl / 10 * sqrt(3 * config.mass * k * temp) / (
5 * config.mass) / period * 100
else:
return -5 * ampl / 10 * sqrt(3 * config.mass * k * temp) / (
5 * config.mass) / period * 100
width, height = config.w.win.GetSize()
offset = config.w.dheight
deltav = 100 # histogram bar width
disp = display(
window=config.w,
x=offset,
y=offset,
forward=vector(0, -0.05, -1),
range=1, # userspin = False,
width=width / 3,
height=height)
g1 = gdisplay(window=config.w,
x=width / 3 + 2 * offset,
y=2 * offset,
background=color.white,
xtitle='t',
ytitle='v',
foreground=color.black,
width=width / 3,
height=height / 2 - 2 * offset)
g2 = gdisplay(window=config.w,
x=width / 3 + 2 * offset,
y=height / 2 + offset,
background=color.white,
foreground=color.black,
width=width / 3,
height=height / 2 - 2 * offset)
# adding empty dots to draw axis
graph_average_speed = gcurve(gdisplay=g1, color=color.white)
graph_average_speed.plot(pos=(3000, 1500))
graph_temp = gcurve(gdisplay=g2, color=color.white)
graph_temp.plot(pos=(3000, config.Natoms * deltav / 1000))
speed_text = wx.StaticText(config.w.panel,
pos=(width / 3 + 2 * offset, offset),
label="Средняя скорость")
graph_text = wx.StaticText(config.w.panel,
pos=(width / 3 + 2 * offset, height / 2),
label="")
L = 1 # container is a cube L on a side
d = L / 2 + config.Ratom # half of cylinder's height
topborder = d
gray = color.gray(0.7) # color of edges of container
# cylinder drawing
cylindertop = cylinder(pos=(0, d - 0.001, 0), axis=(0, 0.005, 0), radius=d)
ringtop = ring(pos=(0, d, 0), axis=(0, -d, 0), radius=d, thickness=0.005)
ringbottom = ring(pos=(0, -d, 0),
axis=(0, -d, 0),
radius=d,
thickness=0.005)
body = cylinder(pos=(0, -d, 0), axis=(0, 2 * d, 0), radius=d, opacity=0.2)
# body_tmp = cylinder(pos = (0, d, 0), axis = (0, 2 * d, 0), radius = d + 0.1, color = (0, 0, 0))
# ceil = box(pos = (0, d, 0), length = 5, height = 0.005, width = 5, color = (0, 0, 0))
# floor = box(pos = (0, -d, 0), length = 100, height = 0.005, width = 100, color = (0, 0, 0))
# left = box(pos = (d + 0.005, 0, 0), axis = (0, 1, 0), length = 100, height = 0.005, width = 100, color = (0, 0, 0))
# right = box(pos = (-d - 0.005, 0, 0), axis = (0, 1, 0), length = 100, height = 0.005, width = 100, color = (0, 0, 0))
# uniform particle distribution
for i in range(config.Natoms):
qq = 2 * pi * random.random()
x = sqrt(random.random()) * L * cos(qq) / 2
y = L * random.random() - L / 2
z = sqrt(random.random()) * L * sin(qq) / 2
if i == 0:
# particle with a trace
config.Atoms.append(
sphere(pos=vector(x, y, z),
radius=config.Ratom,
color=color.cyan,
make_trail=False,
retain=100,
trail_radius=0.3 * config.Ratom))
else:
config.Atoms.append(
sphere(pos=vector(x, y, z), radius=config.Ratom, color=gray))
apos.append(vector(x, y, z))
# waiting to start, adjusting everything according to changing variables
"""WAITING TO START"""
last_Natoms = config.Natoms
last_Ratom = config.Ratom
while config.start == 0:
if config.menu_switch == 0:
disp.delete()
g1.display.delete()
g2.display.delete()
graph_text.Destroy()
speed_text.Destroy()
return
if config.Natoms > last_Natoms:
for i in range(config.Natoms - last_Natoms):
qq = 2 * pi * random.random()
x = sqrt(random.random()) * L * cos(qq) / 2
y = L * random.random() - L / 2
z = sqrt(random.random()) * L * sin(qq) / 2
if last_Natoms == 0:
# particle with a trace
config.Atoms.append(
sphere(pos=vector(x, y, z),
radius=config.Ratom,
color=color.cyan,
make_trail=False,
retain=100,
trail_radius=0.3 * config.Ratom))
else:
config.Atoms.append(
sphere(pos=vector(x, y, z),
radius=config.Ratom,
color=gray))
apos.append(vector(x, y, z))
last_Natoms = config.Natoms
elif config.Natoms < last_Natoms:
for i in range(last_Natoms - config.Natoms):
config.Atoms.pop().visible = False
apos.pop()
last_Natoms = config.Natoms
if last_Ratom != config.Ratom:
for i in range(last_Natoms):
config.Atoms[i].radius = config.Ratom
last_Ratom = config.Ratom
if config.model == 0:
if config.piston_mode >= 1:
graph_text.SetLabel("Температура")
else:
graph_text.SetLabel("Распределение скоростей частиц")
sleep(0.1)
# freezed all variables, ready to start
last_T = config.T
last_ampl = config.ampl
last_period = config.period
last_piston_mode = config.piston_mode
last_model = config.model
pavg = sqrt(3 * config.mass * k *
last_T) # average kinetic energy p**2/(2config.mass) = (3/2)kT
for i in range(last_Natoms):
theta = pi * random.random()
phi = 2 * pi * random.random()
px = pavg * sin(theta) * cos(phi)
py = pavg * sin(theta) * sin(phi)
pz = pavg * cos(theta)
p.append(vector(px, py, pz))
if last_model == 1:
disp.delete()
unavail = wx.StaticText(
config.w.panel,
style=wx.ALIGN_CENTRE_HORIZONTAL,
label="Отображение модели недоступно в режиме статистики",
pos=(offset, height / 2 - offset))
unavail.Wrap(width / 3)
last_period = last_period / 10
last_piston_mode += 1
graph_text.SetLabel("Температура")
""" DRAW GRAPHS """
g1.display.delete()
g2.display.delete()
if last_piston_mode == 0:
g1 = gdisplay(window=config.w,
x=width / 3 + 2 * offset,
y=2 * offset,
background=color.white,
xtitle='t',
ytitle='v',
foreground=color.black,
width=width / 3,
height=height / 2 - 2 * offset,
ymin=0.7 * pavg / config.mass,
ymax=1.3 * pavg / config.mass)
g2 = gdisplay(window=config.w,
x=width / 3 + 2 * offset,
y=height / 2 + offset,
background=color.white,
foreground=color.black,
xtitle='v',
ytitle='Frequency',
width=width / 3,
height=height / 2 - 2 * offset,
xmax=3000 / 300 * last_T,
ymax=last_Natoms * deltav / 1000)
else:
g1 = gdisplay(window=config.w,
x=width / 3 + 2 * offset,
y=2 * offset,
background=color.white,
xtitle='t',
ytitle='v',
foreground=color.black,
width=width / 3,
height=height / 2 - 2 * offset)
g2 = gdisplay(window=config.w,
x=width / 3 + 2 * offset,
y=height / 2 + offset,
background=color.white,
xtitle='t',
ytitle='T',
foreground=color.black,
width=width / 3,
height=height / 2 - 2 * offset)
graph_average_speed = gcurve(gdisplay=g1, color=color.black)
if last_piston_mode:
graph_temp = gcurve(gdisplay=g2, color=color.black)
else:
theory_speed = gcurve(gdisplay=g2, color=color.black)
dv = 10
for v in range(0, int(3000 / 300 * last_T), dv):
theory_speed.plot(pos=(v, (deltav / dv) * last_Natoms * 4 * pi *
((config.mass /
(2 * pi * k * last_T))**1.5) *
exp(-0.5 * config.mass * (v**2) /
(k * last_T)) * (v**2) * dv))
hist_speed = ghistogram(gdisplay=g2,
bins=arange(0, int(3000 / 300 * last_T), 100),
color=color.red,
accumulate=True,
average=True)
speed_data = [] # histogram data
for i in range(last_Natoms):
speed_data.append(pavg / config.mass)
# speed_data.append(0)
""" MAIN CYCLE """
while config.start:
while config.pause:
sleep(0.1)
rate(100)
sp = speed(time, last_piston_mode, last_period, last_ampl, 300)
cylindertop.pos.y -= sp * dt
time += 1
for i in range(last_Natoms):
config.Atoms[i].pos = apos[i] = apos[i] + (p[i] / config.mass) * dt
if last_piston_mode == 0:
speed_data[i] = mag(p[i]) / config.mass
total_momentum = 0
v_sum = 0
for i in range(last_Natoms):
total_momentum += mag2(p[i])
v_sum += sqrt(mag2(p[i])) / config.mass
graph_average_speed.plot(pos=(time, v_sum / last_Natoms))
if last_piston_mode:
graph_temp.plot(pos=(time, total_momentum / (3 * k * config.mass) /
last_Natoms))
else:
hist_speed.plot(data=speed_data)
hitlist = checkCollisions(last_Natoms, last_Ratom)
for ij in hitlist:
i = ij[0]
j = ij[1]
ptot = p[i] + p[j]
posi = apos[i]
posj = apos[j]
vi = p[i] / config.mass
vj = p[j] / config.mass
vrel = vj - vi
a = vrel.mag2
if a == 0: # exactly same velocities
continue
rrel = posi - posj
if rrel.mag > config.Ratom: # one atom went all the way through another
continue
# theta is the angle between vrel and rrel:
dx = dot(rrel, norm(vrel)) # rrel.mag*cos(theta)
dy = cross(rrel, norm(vrel)).mag # rrel.mag*sin(theta)
# alpha is the angle of the triangle composed of rrel, path of atom j, and a line
# from the center of atom i to the center of atom j where atome j hits atom i:
alpha = asin(dy / (2 * config.Ratom))
d = (2 * config.Ratom) * cos(
alpha
) - dx # distance traveled into the atom from first contact
deltat = d / vrel.mag # time spent moving from first contact to position inside atom
posi = posi - vi * deltat # back up to contact configuration
posj = posj - vj * deltat
mtot = 2 * config.mass
pcmi = p[
i] - ptot * config.mass / mtot # transform momenta to cm frame
pcmj = p[j] - ptot * config.mass / mtot
rrel = norm(rrel)
pcmi = pcmi - 2 * pcmi.dot(rrel) * rrel # bounce in cm frame
pcmj = pcmj - 2 * pcmj.dot(rrel) * rrel
p[i] = pcmi + ptot * config.mass / mtot # transform momenta back to lab frame
p[j] = pcmj + ptot * config.mass / mtot
apos[i] = posi + (
p[i] / config.mass) * deltat # move forward deltat in time
apos[j] = posj + (p[j] / config.mass) * deltat
# collisions with walls
for i in range(last_Natoms):
# проекция радиус-вектора на плоскость
loc = vector(apos[i])
loc.y = 0
# вылет за боковую стенку (цилиндр радиуса L / 2 + config.Ratom)
if (mag(loc) > L / 2 + 0.01 - last_Ratom +
sqrt(p[i].x**2 + p[i].z**2) / config.mass * dt):
# проекция импульса на плоскость
proj_p = vector(p[i])
proj_p.y = 0
loc = norm(loc)
# скалярное произведение нормированного радиус-вектора на импульс (все в проекции на плоскость)
dotlp = dot(loc, proj_p)
if dotlp > 0:
p[i] -= 2 * dotlp * loc
# dotlp < 0 - атом улетает от стенки
# dotlp = 0 - атом летит вдоль стенки
loc = apos[i]
# вылет за торцы
if loc.y + p[i].y / config.mass * dt < -L / 2 - 0.01 + last_Ratom:
p[i].y = abs(p[i].y)
if loc.y + p[
i].y / config.mass * dt > cylindertop.pos.y - last_Ratom:
v_otn = p[i].y / config.mass + sp
if v_otn > 0:
p[i].y = (-v_otn - sp) * config.mass
# type here
if last_model == 0:
disp.delete()
else:
unavail.Destroy()
g1.display.delete()
g2.display.delete()
graph_text.Destroy()
speed_text.Destroy()
def runge_lenz(self, o): # print(cross(self.momentum, cross(self.pos, self.momentum)) - pow(self.mass, 2.0) * o.mass * g * norm(self.pos - o.pos)) return cross(self.momentum, self.l()) - pow(self.mass, 2.0) * o.mass * g * norm(self.pos - o.pos)
def baseball(Y, t): # Y = [r, v] assumed
v = Y[1]
fm = alpha*vp.cross(omega, v) # Magnus force
a = (fm - b2*vp.mag(v)*v)/mass - [0,g,0] # minus g-vec
return np.array([v, a]) # np array
def bdipole(r): # calc magnetic fields at $\vec{r}$
b, rel = vp.vector(0,0,0), r-rs
for i in range(len(ds)): # sum over segments
b += vp.cross(ds[i], rel[i])/vp.mag(rel[i])**3 # $\sum Id\vec{s}\times \vec{r}/r^3$
return b