def setUp(self):
self.base_dir = glbl.base
self.home_dir = os.path.join(self.base_dir, 'xpdUser')
self.config_dir = os.path.join(self.base_dir, 'xpdConfig')
self.PI_name = 'Billinge '
self.saf_num = 300000 # must be 30000 for proper load of config yaml => don't change
self.wavelength = 0.1812
self.experimenters = [('van der Banerjee', 'S0ham', 1),
('Terban ', ' Max', 2)]
# make xpdUser dir. That is required for simulation
os.makedirs(self.home_dir, exist_ok=True)
self.bt = _start_beamtime(self.PI_name, self.saf_num,
self.experimenters,
wavelength=self.wavelength)
xlf = '300000_sample.xlsx'
src = os.path.join(os.path.dirname(__file__), xlf)
shutil.copyfile(src, os.path.join(glbl.import_dir, xlf))
import_sample_info(self.saf_num, self.bt)
self.sp = ScanPlan(self.bt, ct, 5)
glbl.shutter_control = True
self.xrun = CustomizedRunEngine(self.bt)
open_collection('unittest')
# simulation objects
glbl.area_det = SimulatedPE1C('pe1c', {'pe1_image': lambda: 5})
glbl.temp_controller = be.motor
glbl.shutter = be.Mover('motor', {'motor': lambda x: x}, {'x': 0})
def setUp(self):
self.base_dir = glbl.base
self.home_dir = os.path.join(self.base_dir, 'xpdUser')
self.config_dir = os.path.join(self.base_dir, 'xpdConfig')
self.PI_name = 'Billinge '
self.saf_num = 300000 # must be 30000 for proper load of config yaml => don't change
self.wavelength = 0.1812
self.experimenters = [('van der Banerjee', 'S0ham', 1),
('Terban ', ' Max', 2)]
# make xpdUser dir. That is required for simulation
os.makedirs(self.home_dir, exist_ok=True)
# set simulation objects
glbl.area_det = SimulatedPE1C('pe1c', {'pe1_image': lambda: 5})
print("AT SETUP: numbe_of_sets = {}, images_per_set = {}, "
"acquire_time ={}"
.format(glbl.area_det.number_of_sets.get(),
glbl.area_det.images_per_set.get(),
glbl.area_det.cam.acquire_time.get()))
glbl.temp_controller = cs700
glbl.shutter = shctl1
self.bt = _start_beamtime(self.PI_name, self.saf_num,
self.experimenters,
wavelength=self.wavelength)
xlf = '300000_sample.xlsx'
src = os.path.join(os.path.dirname(__file__), xlf)
shutil.copyfile(src, os.path.join(glbl.import_dir, xlf))
import_sample_info(self.saf_num, self.bt)
self.xrun = CustomizedRunEngine(self.bt)
open_collection('unittest')
def bt(home_dir):
# start a beamtime
pi = "Billinge "
saf_num = 300000
wavelength = xpd_wavelength
experimenters = [["van der Banerjee", "S0ham", 1], ["Terban ", " Max", 2]]
# copying example longterm config file
os.makedirs(glbl_dict["xpdconfig"], exist_ok=True)
pytest_dir = rs_fn("xpdacq", "tests/")
config = "XPD_beamline_config.yml"
configsrc = os.path.join(pytest_dir, config)
shutil.copyfile(configsrc, glbl_dict["blconfig_path"])
assert os.path.isfile(glbl_dict["blconfig_path"])
bt = _start_beamtime(pi,
saf_num,
experimenters,
wavelength=wavelength,
test=True)
# spreadsheet
xlf = "300000_sample.xlsx"
src = os.path.join(pytest_dir, xlf)
shutil.copyfile(src, os.path.join(glbl_dict["import_dir"], xlf))
import_sample_info(saf_num, bt)
yield bt
# when we are done with the glbl delete the folders.
shutil.rmtree(glbl_dict["home"])
def setUp(self):
self.base_dir = glbl.base
self.home_dir = os.path.join(self.base_dir, 'xpdUser')
self.config_dir = os.path.join(self.base_dir, 'xpdConfig')
self.PI_name = 'Billinge '
self.saf_num = 300000 # must be 30000 for proper load of config yaml => don't change
self.wavelength = 0.1812
self.experimenters = [('van der Banerjee', 'S0ham', 1),
('Terban ', ' Max', 2)]
# make xpdUser dir. That is required for simulation
os.makedirs(self.home_dir, exist_ok=True)
self.bt = _start_beamtime(self.PI_name,
self.saf_num,
self.experimenters,
wavelength=self.wavelength)
xlf = '300000_sample.xlsx'
src = os.path.join(os.path.dirname(__file__), xlf)
shutil.copyfile(src, os.path.join(glbl.import_dir, xlf))
import_sample_info(self.saf_num, self.bt)
self.sp = ScanPlan(self.bt, ct, 5)
glbl.shutter_control = True
self.xrun = CustomizedRunEngine(self.bt)
open_collection('unittest')
# simulation objects
glbl.area_det = SimulatedPE1C('pe1c', {'pe1_image': lambda: 5})
glbl.temp_controller = be.motor
glbl.shutter = be.Mover('motor', {'motor': lambda x: x}, {'x': 0})
def setUp(self):
self.base_dir = Path(glbl["base"])
self.home_dir = Path(glbl["home_dir"])
self.config_dir = Path(glbl["xpdconfig"])
self.PI_name = "Billinge "
# must be 30000 for proper load of config yaml => don't change
self.saf_num = 300000
self.wavelength = 0.1812
self.experimenters = [
("van der Banerjee", "S0ham", 1),
("Terban ", " Max", 2),
]
# make xpdUser dir. That is required for simulation
if self.home_dir.is_dir():
shutil.rmtree(self.home_dir)
self.home_dir.mkdir()
# set simulation objects
db = databroker.v1.temp()
configure_device(
area_det=pe1c,
temp_controller=cs700,
shutter=shctl1,
db=db,
filter_bank=fb,
)
if self.config_dir.is_dir():
shutil.rmtree(self.config_dir)
self.config_dir.mkdir()
pytest_dir = Path(rs_fn("xpdacq", "tests/"))
config = "XPD_beamline_config.yml"
configsrc = pytest_dir.joinpath(config)
shutil.copyfile(configsrc, glbl["blconfig_path"])
self.bt = _start_beamtime(
self.PI_name,
self.saf_num,
self.experimenters,
wavelength=self.wavelength,
test=True,
)
xlf = "300000_sample.xlsx"
src = os.path.join(os.path.dirname(__file__), xlf)
shutil.copyfile(src, os.path.join(glbl["import_dir"], xlf))
import_sample_info(self.saf_num, self.bt)
self.xrun = CustomizedRunEngine({})
self.xrun.beamtime = self.bt
# link mds
self.xrun.subscribe(db.v1.insert, "all")
# grad init_exp_hash_uid
self.init_exp_hash_uid = glbl["exp_hash_uid"]
def test_import_sample_info(self):
# no bt, default argument will fail
self.assertRaises(FileNotFoundError, lambda: import_sample_info())
# make bt but no spreadsheet
self.bt = _start_beamtime(self.PI_name,
self.saf_num,
self.experimenters,
wavelength=self.wavelength)
# expect FileNotFoundError as no spreadsheet
self.assertRaises(FileNotFoundError, lambda: import_sample_info())
# copy spreadsheet
xlf = '300000_sample.xlsx'
src = os.path.join(os.path.dirname(__file__), xlf)
shutil.copyfile(src, os.path.join(glbl.import_dir, xlf))
# expect to pass with default argument
import_sample_info()
# check imported sample metadata
for sample in self.bt.samples:
# Sample is a ChainMap with self.maps[1] == bt
self.assertEqual(sample.maps[1], self.bt)
# expect to pass with explicit argument
import_sample_info(300000, self.bt)
# check imported sample metadata
for sample in self.bt.samples:
# Sample is a ChainMap with self.maps[1] == bt
self.assertEqual(sample.maps[1], self.bt)
# expect ValueError with inconsistent SAF_num between bt and input
self.bt['bt_safN'] = 300179
self.assertTrue(os.path.isfile(os.path.join(glbl.import_dir, xlf)))
self.assertRaises(ValueError, lambda: import_sample_info(300000))
# expct TypeError with incorrect beamtime
self.assertRaises(TypeError, lambda: import_sample_info(bt=set()))