def get(self, rs_id):
"""
Get all SNPs by rs-ID short info
"""
all_args = pagination_parser.parse_args()
filters = self.release_service.get_filters_by_rs_id(rs_id) + \
self.release_service.get_filters_by_fdr(default_fdr_tr(int(self.used_release.version)))
result = self.paginate(all_args, extra_filters=filters)
return {
'results': result,
'total': self.items_count(extra_filters=filters)
}
def get(self, gene_id):
"""
Get all SNPs by eqtl target gene encode id short info
"""
all_args = pagination_parser.parse_args()
gene = self.release_service.get_gene_by_id(gene_id)
if gene is None:
return {'results': [], 'gene': None, 'total': 0}
gene.locus_start, gene.locus_end = self.release_service.get_gene_locus(
gene)
filters = self.release_service.get_filters_by_eqtl_gene(gene) + \
self.release_service.get_filters_by_fdr(default_fdr_tr(int(self.used_release.version)))
result = self.paginate(all_args, extra_filters=filters)
return {
'results': result,
'gene': gene,
'total': self.items_count(extra_filters=filters)
}