aquamarine, azure, beige, bisque, black, blanchedalmond, \
blue, blueviolet, brown, burlywood, cadetblue, \
chartreuse, chocolate, coral, cornflowerblue, cornsilk, \
crimson, cyan, darkblue, darkcyan, darkgoldenrod, \
orange, purple, deeppink, lightcoral, \
blue, cyan, mediumslateblue, steelblue, darkcyan, \
limegreen, darkorchid, tomato, khaki, gold, magenta, green
#define the viewer type dejavu,c4d,blender
ViewerType='c4d'
MSca = 1.0
# Surface:
rSurf1 = Recipe()
## cyl test 1
cyl1Ingr = MultiCylindersIngr(MSca*.001, color=coral, pdb='1CYL',
name='SingleCylinder', radii=[[23]],
positions=[[[-35,0,0]]], positions2=[[[45,0,0]]],
packingPriority=1,
principalVector=(1,0,0)
)
rSurf1.addIngredient(cyl1Ingr)
cylCoord1 = [ (-35,0,0), (45,0,0), (45,0,0), (85, 40, 0),]
cylCoord2 = [ (45,0,0), (85,40,0), (105, -40,0), (135, 40, 30)]
cylRadii = [25, 20, 16, 16]
wrkDir = AutoFill.__path__[0]
from Pmv import hostappInterface
plgDir = hostappInterface.__path__[0]
from DejaVu.colors import red, aliceblue, antiquewhite, aqua, \
aquamarine, azure, beige, bisque, black, blanchedalmond, \
blue, blueviolet, brown, burlywood, cadetblue, \
chartreuse, chocolate, coral, cornflowerblue, cornsilk, \
crimson, cyan, darkblue, darkcyan, darkgoldenrod, \
orange, purple, deeppink, lightcoral, \
blue, cyan, mediumslateblue, steelblue, darkcyan, \
limegreen, darkorchid, tomato, khaki, gold, magenta, green
MSca = 18.0
# Surface:
rSurf1 = Recipe()
# outside
ingrOut = MultiSphereIngr( MSca*.001, color=gold, name='out outside',
sphereFile=wrkDir+'/recipes/anchor.sph',
packingPriority=1,
jitterMax=(0.2,1,1),
#perturbAxisAmplitude=.9,
principalVector=(1,0,0))
rSurf1.addIngredient(ingrOut)
#inside
ingrIn = MultiSphereIngr( MSca*.001, color=chartreuse, name='in inside',
sphereFile=wrkDir+'/recipes/anchor.sph',
packingPriority=1,
from DejaVu.colors import red, aliceblue, antiquewhite, aqua, \
aquamarine, azure, beige, bisque, black, blanchedalmond, \
blue, blueviolet, brown, burlywood, cadetblue, \
chartreuse, chocolate, coral, cornflowerblue, cornsilk, \
crimson, cyan, darkblue, darkcyan, darkgoldenrod, \
orange, purple, deeppink, lightcoral, \
blue, cyan, mediumslateblue, steelblue, darkcyan, \
limegreen, darkorchid, tomato, khaki, gold, magenta, green
#define the viewer type dejavu,c4d,blender
ViewerType='c4d'
MSca = 1.0
# Surface:
rSurf1 = Recipe()
ingr1qo1 = MultiSphereIngr( MSca*.0001/3., color=limegreen, pdb='1qo1',
name='ATP SYNTHASE',
sphereFile=wrkDir+'/recipes/membrane/1qo1.sph',
meshFile=wrkDir+'/recipes/membrane/1qo1',
packingPriority=1,
jitterMax=(1,1,0.2),
principalVector=(0,0,-1))#,
#packingMode='close')
#Surf1.addIngredient(ingr1qo1)
## cyl test 1
cyl1Ingr = MultiCylindersIngr(MSca*0.1, color=coral, pdb='1CYL',
name='SingleCylinder', radii=[[8.]],
positions=[[[0,0,0]]], positions2=[[[20,0,0]]],
packingPriority=1,
from DejaVu.colors import red, aliceblue, antiquewhite, aqua, \
aquamarine, azure, beige, bisque, black, blanchedalmond, \
blue, blueviolet, brown, burlywood, cadetblue, \
chartreuse, chocolate, coral, cornflowerblue, cornsilk, \
crimson, cyan, darkblue, darkcyan, darkgoldenrod, \
orange, purple, deeppink, lightcoral, \
blue, cyan, mediumslateblue, steelblue, darkcyan, \
limegreen, darkorchid, tomato, khaki, gold, magenta, green
#define the viewer type dejavu,c4d,blender
ViewerType='c4d'
MSca = 1.0
## Surface:
rSurf1 = Recipe()
## cyl test 1
cyl1Ingr = MultiCylindersIngr(2, color=coral, pdb='1CYL',
name='SingleCylinder', radii=[[23]],
positions=[[[-35,0,0]]], positions2=[[[45,0,0]]],
packingPriority=1,
principalVector=(1,0,0)
)
rSurf1.addIngredient(cyl1Ingr)
cylCoord1 = [ (-35,0,0), (45,0,0), (45,0,0), (85, 40, 0),]
cylCoord2 = [ (45,0,0), (85,40,0), (105, -40,0), (135, 40, 30)]
cylRadii = [25, 20, 16, 16]
cyl4Ingr = MultiCylindersIngr(3, color=aquamarine, pdb='1CYL',
from DejaVu.colors import red, aliceblue, antiquewhite, aqua, \
aquamarine, azure, beige, bisque, black, blanchedalmond, \
blue, blueviolet, brown, burlywood, cadetblue, \
chartreuse, chocolate, coral, cornflowerblue, cornsilk, \
crimson, cyan, darkblue, darkcyan, darkgoldenrod, \
orange, purple, deeppink, lightcoral, \
blue, cyan, mediumslateblue, steelblue, darkcyan, \
limegreen, darkorchid, tomato, khaki, gold, magenta, green
#define the viewer type dejavu,c4d,blender
ViewerType='c4d'
MSca = 1.0
## Surface:
rSurf1 = Recipe()
## cyl test 1
cyl1Ingr = MultiCylindersIngr(2, color=coral, pdb='1CYL',
name='SingleCylinder', radii=[[23]],
positions=[[[-35,0,0]]], positions2=[[[45,0,0]]],
packingPriority=1,
principalVector=(1,0,0)
)
rSurf1.addIngredient(cyl1Ingr)
cylCoord1 = [ (-35,0,0), (45,0,0), (45,0,0), (85, 40, 0),]
cylCoord2 = [ (45,0,0), (85,40,0), (105, -40,0), (135, 40, 30)]
cylRadii = [25, 20, 16, 16]
cyl4Ingr = MultiCylindersIngr(3, color=aquamarine, pdb='1CYL',
#DEJAVU COLORS
from DejaVu.colors import red, aliceblue, antiquewhite, aqua, \
aquamarine, azure, beige, bisque, black, blanchedalmond, \
blue, blueviolet, brown, burlywood, cadetblue, \
chartreuse, chocolate, coral, cornflowerblue, cornsilk, \
crimson, cyan, darkblue, darkcyan, darkgoldenrod, \
orange, purple, deeppink, lightcoral, \
blue, cyan, mediumslateblue, steelblue, darkcyan, \
limegreen, darkorchid, tomato, khaki, gold, magenta, green
#define the viewer type dejavu,c4d,blender
ViewerType = 'c4d'
MSca = 1.0
# Surface:
rSurf1 = Recipe()
## cyl test 1
cyl1Ingr = MultiCylindersIngr(MSca * .001,
color=coral,
pdb='1CYL',
name='SingleCylinder',
radii=[[23]],
positions=[[[-35, 0, 0]]],
positions2=[[[45, 0, 0]]],
packingPriority=1,
principalVector=(1, 0, 0))
rSurf1.addIngredient(cyl1Ingr)
cylCoord1 = [
wrkDir = AutoFill.__path__[0]
from Pmv import hostappInterface
plgDir = hostappInterface.__path__[0]
from DejaVu.colors import red, aliceblue, antiquewhite, aqua, \
aquamarine, azure, beige, bisque, black, blanchedalmond, \
blue, blueviolet, brown, burlywood, cadetblue, \
chartreuse, chocolate, coral, cornflowerblue, cornsilk, \
crimson, cyan, darkblue, darkcyan, darkgoldenrod, \
orange, purple, deeppink, lightcoral, \
blue, cyan, mediumslateblue, steelblue, darkcyan, \
limegreen, darkorchid, tomato, khaki, gold, magenta, green
MSca = 18.0
# Surface:
rSurf1 = Recipe()
# outside
ingrOut = MultiSphereIngr( MSca*.001, color=gold, name='out outside',
sphereFile=wrkDir+'/recipes/anchor.sph',
packingPriority=1,
jitterMax=(0.2,1,1),
#perturbAxisAmplitude=.9,
principalVector=(1,0,0))
rSurf1.addIngredient(ingrOut)
#inside
ingrIn = MultiSphereIngr( MSca*.001, color=chartreuse, name='in inside',
sphereFile=wrkDir+'/recipes/anchor.sph',
packingPriority=1,
