def _parse_reaction(element):
new_reaction = Reaction()
for k, v in element.attrib.items():
new_reaction.__setattr__(k, v)
for subelement in element:
if subelement.tag == "substrate":
new_reaction.add_substrate(int(subelement.attrib["id"]))
elif subelement.tag == "product":
new_reaction.add_product(int(subelement.attrib["id"]))
self.pathway.add_reaction(new_reaction)
def _parse_reaction(element):
new_reaction = Reaction()
for k, v in element.attrib.items():
new_reaction.__setattr__(k, v)
for subelement in element.getchildren():
if subelement.tag == 'substrate':
new_reaction.add_substrate(int(subelement.attrib['id']))
elif subelement.tag == 'product':
new_reaction.add_product(int(subelement.attrib['id']))
self.pathway.add_reaction(new_reaction)
def _parse_reaction(element):
new_reaction = Reaction()
for k, v in element.attrib.items():
new_reaction.__setattr__(k, v)
for subelement in element.getchildren():
if subelement.tag == 'substrate':
new_reaction.add_substrate(int(subelement.attrib['id']))
elif subelement.tag == 'product':
new_reaction.add_product(int(subelement.attrib['id']))
self.pathway.add_reaction(new_reaction)