def _pathway(self):
s = []
for entry in self.pathway:
s.append(entry[0] + ": " + entry[1] + " " + entry[2])
return _write_kegg("PATHWAY",
[_wrap_kegg(l, wrap_rule=id_wrap(16))
for l in s])
def _pathway(self):
s = []
for entry in self.pathway:
s.append(entry[0] + " " + entry[1])
return _write_kegg("PATHWAY",
[_wrap_kegg(l, wrap_rule=id_wrap(16))
for l in s])
def _structures(self):
s = []
for entry in self.structures:
s.append(entry[0] + ": " + " ".join(entry[1]) + " ")
return _write_kegg("STRUCTURES",
[_wrap_kegg(l, wrap_rule = struct_wrap(5)) \
for l in s])
def _disease(self):
s = []
for entry in self.disease:
s.append(entry[0] + ": " + entry[1] + " " + entry[2])
return _write_kegg("DISEASE",
[_wrap_kegg(l, wrap_rule = id_wrap(13)) \
for l in s])
def _dblinks(self):
s = []
for entry in self.dblinks:
s.append(entry[0] + ": " + " ".join(entry[1]))
return _write_kegg("DBLINKS",
[_wrap_kegg(l, wrap_rule = id_wrap(9)) \
for l in s])
def _genes(self):
s = []
for entry in self.genes:
s.append(entry[0] + ": " + " ".join(entry[1]))
return _write_kegg("GENES",
[_wrap_kegg(l, wrap_rule = id_wrap(5)) \
for l in s])
def _structures(self):
s = []
for entry in self.structures:
s.append(entry[0] + ": " + " ".join(entry[1]) + " ")
return _write_kegg("STRUCTURES",
[_wrap_kegg(l, wrap_rule=struct_wrap(5))
for l in s])
def _dblinks(self):
s = []
for entry in self.dblinks:
s.append(entry[0] + ": " + " ".join(entry[1]))
return _write_kegg("DBLINKS",
[_wrap_kegg(l, wrap_rule=id_wrap(9))
for l in s])
def _enzyme(self):
s = ""
for entry in self.enzyme:
if entry[1]:
t = entry[0] + " (" + entry[1] + ")"
else:
t = entry[0]
s = s + t.ljust(16)
return _write_kegg("ENZYME", [_wrap_kegg(s, wrap_rule=id_wrap(0))])
def _enzyme(self):
s = ""
for entry in self.enzyme:
if entry[1]:
t = entry[0] + " (" + entry[1] + ")"
else:
t = entry[0]
s = s + t.ljust(16)
return _write_kegg("ENZYME",
[_wrap_kegg(s, wrap_rule = id_wrap(0))])
def _name(self):
return _write_kegg("NAME",
[_wrap_kegg(l, wrap_rule=name_wrap)
for l in self.name])
def _comment(self):
return _write_kegg("COMMENT", [_wrap_kegg(l, wrap_rule=id_wrap(0)) for l in self.comment])
def _cofactor(self):
return _write_kegg("COFACTOR", [_wrap_kegg(l, wrap_rule=name_wrap) for l in self.cofactor])
def _product(self):
return _write_kegg("PRODUCT", [_wrap_kegg(l, wrap_rule=name_wrap) for l in self.product])
def _name(self):
return _write_kegg("NAME",
[_wrap_kegg(l, wrap_rule=name_wrap)
for l in self.name])
def _sysname(self):
return _write_kegg("SYSNAME",
[_wrap_kegg(l, wrap_rule = name_wrap) \
for l in self.sysname])
def _disease(self):
s = []
for entry in self.disease:
s.append(entry[0] + ": " + entry[1] + " " + entry[2])
return _write_kegg("DISEASE",
[_wrap_kegg(l, wrap_rule=id_wrap(13)) for l in s])
def _genes(self):
s = []
for entry in self.genes:
s.append(entry[0] + ": " + " ".join(entry[1]))
return _write_kegg("GENES",
[_wrap_kegg(l, wrap_rule=id_wrap(5)) for l in s])
def _enzyme(self):
return _write_kegg("ENZYME",
[_wrap_kegg(l, wrap_rule=name_wrap)
for l in self.enzyme])
def _reaction(self):
return _write_kegg("REACTION", [_wrap_kegg(l, wrap_rule=rxn_wrap) for l in self.reaction])
def _reaction(self):
return _write_kegg("REACTION",
[_wrap_kegg(l, wrap_rule = rxn_wrap) \
for l in self.reaction])
def _name(self):
return _write_kegg("NAME",
map(lambda l:
_wrap_kegg(l, wrap_rule = name_wrap),
self.name))
def _sysname(self):
return _write_kegg("SYSNAME", [_wrap_kegg(l, wrap_rule=name_wrap) for l in self.sysname])
def _substrate(self):
return _write_kegg("SUBSTRATE",
[_wrap_kegg(l, wrap_rule = name_wrap) \
for l in self.substrate])
def _substrate(self):
return _write_kegg("SUBSTRATE", [_wrap_kegg(l, wrap_rule=name_wrap) for l in self.substrate])
def _product(self):
return _write_kegg("PRODUCT",
[_wrap_kegg(l, wrap_rule = name_wrap) \
for l in self.product])
def _inhibitor(self):
return _write_kegg("INHIBITOR", [_wrap_kegg(l, wrap_rule=name_wrap) for l in self.inhibitor])
def _inhibitor(self):
return _write_kegg("INHIBITOR",
[_wrap_kegg(l, wrap_rule = name_wrap) \
for l in self.inhibitor])
def _effector(self):
return _write_kegg("EFFECTOR", [_wrap_kegg(l, wrap_rule=name_wrap) for l in self.effector])
def _cofactor(self):
return _write_kegg("COFACTOR",
[_wrap_kegg(l, wrap_rule = name_wrap) \
for l in self.cofactor])
def _name(self):
return _write_kegg("NAME", map(lambda l: _wrap_kegg(l, wrap_rule=name_wrap), self.name))
def _effector(self):
return _write_kegg("EFFECTOR",
[_wrap_kegg(l, wrap_rule = name_wrap) \
for l in self.effector])
def _enzyme(self):
return _write_kegg("ENZYME",
[_wrap_kegg(l, wrap_rule=name_wrap)
for l in self.enzyme])
def _comment(self):
return _write_kegg("COMMENT",
[_wrap_kegg(l, wrap_rule = id_wrap(0)) \
for l in self.comment])
