def update_show_hide_peak_btn(self):
if self.selected_peak:
print(self.selected_peak.hidden)
self.hide_peak_button.Enable()
if self.selected_peak.hidden:
self.hide_peak_button.SetLabelText("Show Peak")
# self.hide_peak_button.SetBitmapLabel(get_icon(wx.ART_TICK_MARK, 24))
self.hide_peak_button.SetBitmapLabel(
get_icon("show-open-eye", 24))
else:
self.hide_peak_button.SetLabelText("Hide Peak")
# self.hide_peak_button.SetBitmapLabel(get_icon(wx.ART_CROSS_MARK, 24))
self.hide_peak_button.SetBitmapLabel(
get_icon("hide-closed-eye", 24))
else:
self.hide_peak_button.Disable()
# self.hide_peak_button.SetLabelText("Hide Peak")
# # self.hide_peak_button.SetBitmapLabel(get_icon(wx.ART_CROSS_MARK, 24))
# self.hide_peak_button.SetBitmapLabel(get_icon("hide-closed-eye", 24))
self.hide_peak_button.SetLabelText("Show Peak")
# self.hide_peak_button.SetBitmapLabel(get_icon(wx.ART_TICK_MARK, 24))
self.hide_peak_button.SetBitmapLabel(get_icon("show-open-eye", 24))
self.hide_peak_button.Refresh()
def _populate_toolbar(self):
self.add_tool(
ToolData(
name="New Experiment (Ctrl+E)",
icon=get_icon("new-experiment", 24),
id=ID_New_Experiment,
handler=self.parent.on_new_experiment,
), wx.ITEM_DROPDOWN)
new_experiment_menu = wx.Menu()
new_experiment_menu.Append(ID_New_Experiment_Single,
"Create New Experiment", "")
new_experiment_menu.Append(ID_New_Experiment_Multiple,
"Create Multiple Experiments", "")
self.SetDropdownMenu(ID_New_Experiment, new_experiment_menu)
self.add_tool(
ToolData(name="Previous Experiment (Ctrl+<)",
icon=get_icon(wx.ART_GO_BACK, tb_icon_size[0]),
id=ID_Previous_Experiment))
self.add_tool(
ToolData(name="Next Experiment (Ctrl+>)",
icon=get_icon(wx.ART_GO_FORWARD, tb_icon_size[0]),
id=ID_Next_Experiment))
def _setup_image_list(self):
# Image List
isz = (16, 16)
self.il = wx.ImageList(isz[0], isz[1])
self.il.Add(get_icon("chromatogram", isz[0]))
self.il.Add(get_icon("peak", isz[0]))
self.il.Add(get_icon("Conical_flask_red", isz[0]))
self.tree.SetImageList(self.il)
def _populate_toolbar(self):
self.add_tool(
ToolData("Configure Colours", get_icon("configure-colours", 24),
ID_Config_Colours))
self.add_tool(
ToolData("Configure Markers", get_icon("configure-markers", 24),
ID_Config_Markers))
self.add_tool(
ToolData("Configure Borders", get_icon("configure-borders", 24),
ID_Config_Borders))
def _create_buttons(self):
# Create Buttons
# TODO: Tooltips and bindings
IdentificationPanel._create_buttons(self)
self.peak_number_combo = wx.ComboBox(self, size=(100, -1), validator=CharValidator("int-only"))
self.previous_peak_btn = buttons.GenBitmapButton(self, bitmap=get_icon(wx.ART_GO_BACK, 24))
self.previous_peak_btn.SetToolTip("Previous Peak")
self.next_peak_btn = buttons.GenBitmapButton(self, bitmap=get_icon(wx.ART_GO_FORWARD, 24))
self.next_peak_btn.SetToolTip("Next Peak")
self.btn_sizer.AddSpacer(20)
self.btn_sizer.Add(wx.StaticText(self, label="Peak Number: "), 1, wx.ALIGN_CENTER_VERTICAL, 0)
self.btn_sizer.Add(self.peak_number_combo, 0, wx.EXPAND, 0)
self.btn_sizer.Add(self.previous_peak_btn, 0, wx.EXPAND, 0)
self.btn_sizer.Add(self.next_peak_btn, 0, wx.EXPAND, 0)
def __set_properties(self):
# begin wxGlade: _WelcomeDialog.__set_properties
self.SetTitle("Welcome to GunShotMatch")
self.SetSize((777, 460))
self.left_panel.SetMinSize((300, -1))
self.version_label.SetFont(wx.Font(8, wx.FONTFAMILY_DEFAULT, wx.FONTSTYLE_NORMAL, wx.FONTWEIGHT_NORMAL, 0, ""))
self.new_project_button.SetMinSize((200, 40))
self.open_project_button.SetMinSize((200, 40))
self.new_experiment_button.SetMinSize((40, 40))
self.new_experiment_button.SetToolTip("Create a new Experiment")
self.method_editor_button.SetMinSize((40, 40))
self.method_editor_button.SetToolTip("Open the Method Editor")
self.ammo_editor_editor.SetMinSize((40, 40))
self.ammo_editor_editor.SetToolTip("Open the Ammunition Details Editor")
self.show_dialog_checkbox.SetMinSize((-1, 40))
self.show_dialog_checkbox.SetValue(1)
self.settings_button.SetMinSize((-1, 40))
self.help_button.SetMinSize((-1, 40))
# end wxGlade
_icon = wx.NullIcon
_icon.CopyFromBitmap(get_icon("logo-v2", 256))
self.SetIcon(_icon)
self.add_recent_projects()
if self.recent_project_ctrl.GetItemCount() == 0:
self.left_panel.Show(False)
self.Layout()
if "msw" in wx.Platform.lower():
self.SetSize((793, 487))
def _populate_toolbar(self):
self.add_tool(
ToolData(
name="New Project (Ctrl+N)",
icon=get_icon(wx.ART_NEW, tb_icon_size[0]),
id=wx.ID_NEW,
handler=self.parent.on_new_project,
))
self.add_tool(
ToolData(
name="Open Project (Ctrl+O)",
icon=get_icon(wx.ART_FILE_OPEN, tb_icon_size[0]),
id=wx.ID_OPEN,
handler=self.parent.on_open_project,
), wx.ITEM_DROPDOWN)
recent_menu = wx.Menu()
for ID in recent_project_ids:
recent_menu.Append(ID, "item", "")
self.SetDropdownMenu(wx.ID_OPEN, recent_menu)
self.add_tool(
ToolData(
name="Save Project (Ctrl+S)",
icon=get_icon(wx.ART_FILE_SAVE, tb_icon_size[0]),
id=wx.ID_SAVE,
handler=self.parent.on_save_project,
))
self.add_tool(
ToolData(
name="Save All",
icon=get_icon("geany-save-all", 24),
id=ID_Save_All,
handler=self.parent.on_save_all,
))
self.add_tool(
ToolData(
name="Close Project",
icon=get_icon("close", tb_icon_size[0]),
id=ID_Close_Project,
handler=self.parent.on_close_project,
))
def _populate_toolbar(self):
self.add_tool(
ToolData("Previous Experiment (Ctrl+<)",
get_icon(wx.ART_GO_BACK, tb_icon_size[0]),
ID_Spec_Viewer_Previous_Experiment,
self.parent.previous_experiment))
self.add_tool(
ToolData("Next Experiment (Ctrl+>)",
get_icon(wx.ART_GO_FORWARD,
tb_icon_size[0]), ID_Spec_Viewer_Next_Experiment,
self.parent.next_experiment))
self.AddSeparator()
self.add_tool(
ToolData("Reset View", get_icon(wx.ART_GO_HOME, tb_icon_size[0]),
ID_Spec_Viewer_View_Reset, self.parent.reset_view))
self.add_tool(
ToolData("Previous View",
get_icon(wx.ART_GO_TO_PARENT, tb_icon_size[0]),
ID_Spec_Viewer_View_Previous, self.parent.previous_view))
self.add_radio_tool(
ToolData("Select", get_icon("default-cursor", 24),
ID_Spec_Viewer_View_Default, self.parent.tool_select))
self.add_radio_tool(
ToolData("Zoom (Ctrl+Shift+Z)", get_icon("zoom", 24),
ID_Spec_Viewer_View_Zoom, self.parent.tool_zoom))
self.add_radio_tool(
ToolData("Pan (Ctrl+Shift+P)", get_icon("gimp-tool-move", 24),
ID_Spec_Viewer_View_Pan, self.parent.tool_pan))
self.AddSeparator()
self.add_tool(
ToolData("View Spectrum By Scan No.",
get_icon("mass-spectrum-123", tb_icon_size[0]),
ID_Spec_Viewer_by_num, self.parent.spectrum_by_number))
self.add_tool(
ToolData("View Spectrum By RT",
get_icon("mass-spectrum-rt", tb_icon_size[0]),
ID_Spec_Viewer_by_rt, self.parent.spectrum_by_rt))
def _create_buttons(self):
self.btn_sizer = wx.BoxSizer(wx.HORIZONTAL)
self.sort_filter_btn = buttons.GenBitmapTextButton(self, -1, None, "Sort & Filter ")
self.sort_filter_btn.SetBitmapLabel(get_icon("data-filter", 24))
self.expand_all_btn = buttons.GenButton(self, label=" Expand All ")
self.collapse_all_btn = buttons.GenButton(self, label=" Collapse All ")
self.btn_sizer.Add(self.sort_filter_btn, 0, wx.EXPAND, 0)
self.btn_sizer.Add(self.expand_all_btn, 0, wx.EXPAND, 0)
self.btn_sizer.Add(self.collapse_all_btn, 0, wx.EXPAND, 0)
def _create_btn_sizer(self, parent):
# Create Buttons
# TODO: Tooltips and bindings
btn_sizer = wx.BoxSizer(wx.HORIZONTAL)
# TODO: Two lines. Top line has filter peaks, Peak number, combobox and arrows
# Line two has hide peak (with eye icon), show hidden peaks, and show rsd button
self.filter_peaks_btn = buttons.GenBitmapTextButton(
self, -1, None, "Filter Peaks ")
self.filter_peaks_btn.SetBitmapLabel(get_icon("data-filter", 24))
self.peak_number_combo = wx.ComboBox(
parent, size=(100, -1), validator=CharValidator("int-only"))
self.previous_peak_btn = buttons.GenBitmapButton(parent,
bitmap=get_icon(
wx.ART_GO_BACK,
24))
self.previous_peak_btn.SetToolTip("Previous Peak")
self.next_peak_btn = buttons.GenBitmapButton(parent,
bitmap=get_icon(
wx.ART_GO_FORWARD,
24))
self.next_peak_btn.SetToolTip("Next Peak")
btn_sizer.Add(self.filter_peaks_btn, 0, wx.EXPAND, 0)
btn_sizer.AddSpacer(20)
btn_sizer.Add(wx.StaticText(parent, label="Peak Number: "), 1,
wx.ALIGN_CENTER_VERTICAL, 0)
btn_sizer.Add(self.peak_number_combo, 0, wx.EXPAND, 0)
btn_sizer.Add(self.previous_peak_btn, 0, wx.EXPAND, 0)
btn_sizer.Add(self.next_peak_btn, 0, wx.EXPAND, 0)
btn_sizer.AddSpacer(10)
return btn_sizer
def _populate_toolbar(self):
self.add_tool(
ToolData(
name="Export as PDF",
icon=get_icon("export-pdf", tb_icon_size[0]),
id=ID_Export_PDF,
handler=self.parent.on_export_pdf,
))
self.add_tool(
ToolData(
name="Print (Ctrl+P)",
icon=get_icon("Document-print", tb_icon_size[0]),
id=wx.ID_PRINT,
handler=self.parent.on_print,
))
self.add_tool(
ToolData(
name="Print Preview",
icon=get_icon("Document-print-preview", tb_icon_size[0]),
id=wx.ID_PREVIEW_PRINT,
handler=self.parent.on_print_preview,
))
def _set_properties(self):
# tell FrameManager to manage this frame
self._mgr = aui.AuiManager(flags=wx.aui.AUI_MGR_LIVE_RESIZE
| wx.aui.AUI_MGR_DEFAULT)
self._mgr.SetManagedWindow(self)
self.GunShotMatch_statusbar.SetStatusWidths([-2, -3])
# statusbar fields
GunShotMatch_statusbar_fields = ["Ready", "Welcome to GunShotMatch"]
for i in range(len(GunShotMatch_statusbar_fields)):
self.GunShotMatch_statusbar.SetStatusText(
GunShotMatch_statusbar_fields[i], i)
_icon = wx.NullIcon
_icon.CopyFromBitmap(get_icon("logo-v2", 256))
self.SetIcon(_icon)
def _create_hits_btn_sizer(self, parent):
# Create Buttons
# TODO: Tooltips and bindings
btn_sizer = wx.BoxSizer(wx.HORIZONTAL)
btn_sizer.Add(wx.StaticText(parent, label="Hits:"), 1,
wx.ALIGN_BOTTOM | wx.LEFT, 8)
self.filter_hits_btn = buttons.GenBitmapTextButton(
self, -1, None, "Filter Hits ")
self.filter_hits_btn.SetBitmapLabel(get_icon("data-filter", 24))
btn_sizer.Add(self.filter_hits_btn, 0, wx.EXPAND | wx.ALIGN_RIGHT, 0)
btn_sizer.AddSpacer(20)
return btn_sizer
def __init__(
self, parent, id=wx.ID_ANY, title='', pos=wx.DefaultPosition,
style=wx.DEFAULT_DIALOG_STYLE, name=wx.DialogNameStr
):
"""
:param parent: Can be None, a frame or another dialog box.
:type parent: wx.Window
:param id: An identifier for the dialog. A value of -1 is taken to mean a default.
:type id: wx.WindowID
:param title: The title of the dialog.
:type title: str
:param pos: The dialog position. The value DefaultPosition indicates a
default position, chosen by either the windowing system or wxWidgets,
depending on platform.
:type pos: wx.Point
:param style: The window style.
:type style: int
:param name: Used to associate a name with the window, allowing the
application user to set Motif resource values for individual dialog boxes.
:type name: str
"""
wx.Dialog.__init__(
self, parent=parent, id=id, title=title, pos=pos, size=(468, 420),
style=style | wx.DEFAULT_DIALOG_STYLE, name=name
)
self.proj_report_btn = CustomBitmapButton(self, wx.ID_ANY, get_icon("export_project_report", 110), "Project Report")
self.expr_report_btn = CustomBitmapButton(self, wx.ID_ANY, get_icon(wx.ART_REPORT_VIEW, 110), "Experiment Report")
self.expr_data_btn = CustomBitmapButton(self, wx.ID_ANY, get_icon("export_jdx", 110), "Experiment Data")
self.method_btn = CustomBitmapButton(self, wx.ID_ANY, get_icon("method", 110), "Method")
self.ammo_details_btn = CustomBitmapButton(self, wx.ID_ANY, get_icon("ammo-details", 110), "Ammo Details")
self.current_view_pdf_btn = CustomBitmapButton(self, wx.ID_ANY, get_icon("export-pdf", 110), "PDF")
self.current_view_images_btn = CustomBitmapButton(self, wx.ID_ANY, get_icon("export_images", 110), "Images")
self.current_view_csv_btn = CustomBitmapButton(self, wx.ID_ANY, get_icon("LibreOffice_Calc", 110), "CSV")
self._set_properties()
self._do_layout()
self._bind_events()
def __do_layout(self):
# begin wxGlade: MethodEditorAboutDialog.__do_layout
main_sizer = wx.BoxSizer(wx.VERTICAL)
main_sizer.Add((20, 20), 0, 0, 0)
meth_editor_icon = wx.StaticBitmap(self, wx.ID_ANY,
get_icon("method-editor", 64))
main_sizer.Add(meth_editor_icon, 0,
wx.ALIGN_CENTER_HORIZONTAL | wx.BOTTOM | wx.TOP, 3)
meth_editor_label = wx.StaticText(self,
wx.ID_ANY,
"GunShotMatch Method Editor",
style=wx.ALIGN_CENTER)
meth_editor_label.SetFont(
wx.Font(16, wx.FONTFAMILY_DEFAULT, wx.FONTSTYLE_NORMAL,
wx.FONTWEIGHT_BOLD, 0, ""))
main_sizer.Add(
meth_editor_label, 0,
wx.ALIGN_CENTER_HORIZONTAL | wx.BOTTOM | wx.EXPAND | wx.TOP, 3)
version_label = wx.StaticText(self,
wx.ID_ANY,
"Version <version string goes here>",
style=wx.ALIGN_CENTER)
main_sizer.Add(version_label, 0, wx.ALIGN_CENTER_HORIZONTAL | wx.ALL,
10)
copyright_label = wx.StaticText(
self,
wx.ID_ANY,
u"Copyright © 2019-2020\nDominic Davis-Foster\nAll rights reserved.",
style=wx.ALIGN_CENTER)
main_sizer.Add(copyright_label, 0, wx.ALIGN_CENTER_HORIZONTAL | wx.ALL,
20)
self.SetSizer(main_sizer)
self.Layout()
# end wxGlade
btns = self.CreateStdDialogButtonSizer(wx.OK)
main_sizer.Add(btns, 0, wx.ALIGN_RIGHT | wx.ALIGN_BOTTOM)
self.SetSizer(main_sizer)
self.Layout()
def __do_layout(self):
# begin wxGlade: _WelcomeDialog.__do_layout
outer_sizer = wx.BoxSizer(wx.HORIZONTAL)
main_sizer = wx.BoxSizer(wx.VERTICAL)
sizer_1 = wx.GridSizer(1, 2, 0, 0)
bottom_sizer = wx.BoxSizer(wx.HORIZONTAL)
bitmap_button_sizer = wx.GridSizer(1, 3, 0, 0)
recent_project_grid = wx.GridSizer(1, 1, 0, 0)
recent_project_grid.Add(self.recent_project_ctrl, 1, wx.EXPAND, 0)
self.left_panel.SetSizer(recent_project_grid)
outer_sizer.Add(self.left_panel, 2, wx.EXPAND, 5)
GSM_Logo = wx.StaticBitmap(self.right_panel, wx.ID_ANY, get_icon("logo-v2", 128))
main_sizer.Add(GSM_Logo, 0, wx.ALIGN_CENTER_HORIZONTAL | wx.TOP, 20)
gsm_label = wx.StaticText(self.right_panel, wx.ID_ANY, "GunShotMatch")
gsm_label.SetFont(wx.Font(20, wx.FONTFAMILY_DEFAULT, wx.FONTSTYLE_NORMAL, wx.FONTWEIGHT_BOLD, 0, ""))
main_sizer.Add(gsm_label, 0, wx.ALIGN_CENTER_HORIZONTAL | wx.TOP, 15)
main_sizer.Add(self.version_label, 0, wx.ALIGN_CENTER_HORIZONTAL | wx.TOP, 5)
main_sizer.Add((20, 20), 0, 0, 0)
main_sizer.Add(self.new_project_button, 0, wx.ALIGN_CENTER_HORIZONTAL | wx.TOP, 10)
main_sizer.Add(self.open_project_button, 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
static_line_4 = wx.StaticLine(self.right_panel, wx.ID_ANY)
main_sizer.Add(static_line_4, 0, wx.BOTTOM | wx.EXPAND | wx.TOP, 10)
bitmap_button_sizer.Add(self.new_experiment_button, 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
bitmap_button_sizer.Add(self.method_editor_button, 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
bitmap_button_sizer.Add(self.ammo_editor_editor, 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
main_sizer.Add(bitmap_button_sizer, 1, wx.ALIGN_CENTER_HORIZONTAL | wx.EXPAND, 0)
sizer_1.Add(self.show_dialog_checkbox, 0, wx.ALIGN_BOTTOM | wx.LEFT | wx.RIGHT, 30)
bottom_sizer.Add(self.settings_button, 0, wx.ALIGN_BOTTOM | wx.RIGHT, 5)
bottom_sizer.Add(self.help_button, 0, wx.ALIGN_BOTTOM | wx.RIGHT, 10)
sizer_1.Add(bottom_sizer, 0, wx.ALIGN_BOTTOM | wx.ALIGN_RIGHT, 0)
self.bottom_panel.SetSizer(sizer_1)
main_sizer.Add(self.bottom_panel, 1, wx.ALIGN_RIGHT | wx.BOTTOM | wx.EXPAND, 5)
self.right_panel.SetSizer(main_sizer)
outer_sizer.Add(self.right_panel, 3, wx.BOTTOM | wx.EXPAND | wx.RIGHT | wx.TOP, 5)
self.SetSizer(outer_sizer)
self.Layout()
def __init__(self, *args, **kwds):
"""
:param parent: Can be None, a frame or another dialog box.
:type parent: wx.Window
:param id: An identifier for the dialog. A value of -1 is taken to mean a default.
:type id: wx.WindowID
:param title: The title of the dialog.
:type title: str
:param pos: The dialog position. The value DefaultPosition indicates a
default position, chosen by either the windowing system or wxWidgets,
depending on platform.
:type pos: wx.Point
:param size: The dialog size. The value DefaultSize indicates a default
size, chosen by either the windowing system or wxWidgets, depending on
platform.
:type size: wx.Size
:param style: The window style.
:type style: int
:param name: Used to associate a name with the window, allowing the
application user to set Motif resource values for individual dialog boxes.
:type name: str
"""
# begin wxGlade: PreferencesDialog.__init__
kwds["style"] = kwds.get("style", 0) | wx.DEFAULT_DIALOG_STYLE
wx.Dialog.__init__(self, *args, **kwds)
self.SetSize((680, 400))
self.preferences_notebook = wx.Notebook(self, wx.ID_ANY)
self.general_page = wx.Panel(self.preferences_notebook, wx.ID_ANY)
self.show_welcome_dialog = wx.CheckBox(
self.general_page, wx.ID_ANY,
"Show 'Welcome' Dialog when starting GunShotMatch")
self.close_with_welcome_dialog = wx.CheckBox(
self.general_page, wx.ID_ANY,
"Exit GunShotMatch when closing 'Welcome' dialog")
self.paths_page = wx.Panel(self.preferences_notebook, wx.ID_ANY)
self.paths_panel = wx.Panel(self.paths_page, wx.ID_ANY)
self.nistpath = DirBrowseCtrl(self.paths_panel,
wx.ID_ANY,
labelText='')
self.nistpath_help = wx.BitmapButton(self.paths_panel, wx.ID_ANY,
get_icon("information", 16))
self.resultspath = DirBrowseCtrl(self.paths_panel,
wx.ID_ANY,
labelText='')
self.csvpath = DirBrowseCtrl(self.paths_panel, wx.ID_ANY, labelText='')
self.spectrapath = DirBrowseCtrl(self.paths_panel,
wx.ID_ANY,
labelText='')
self.msppath = DirBrowseCtrl(self.paths_panel, wx.ID_ANY, labelText='')
self.charts_path = DirBrowseCtrl(self.paths_panel,
wx.ID_ANY,
labelText='')
self.chart_colours_page = wx.Panel(self.preferences_notebook,
wx.ID_ANY)
self.colour_picker = ColourPickerPanel(
self.chart_colours_page,
wx.ID_ANY,
selection_choices=internal_config.chart_colours)
self.chart_markers_page = wx.Panel(self.preferences_notebook,
wx.ID_ANY)
self.marker_picker = StylePickerPanel(
self.chart_markers_page,
wx.ID_ANY,
selection_choices=internal_config.chart_styles)
self.__set_properties()
self.__do_layout()
self.Bind(wx.EVT_BUTTON, self.on_nistpath_help, self.nistpath_help)
# end wxGlade
# Populate the settings
self.load_preferences()
self.Bind(wx.EVT_BUTTON, self.on_ok, id=wx.ID_OK)
def __init__(self,
parent,
project,
id=wx.ID_ANY,
pos=wx.DefaultPosition,
size=wx.DefaultSize,
style=0,
name="AlignmentDataPanel"):
"""
TODO: Does this need to be a sorter panel or would a simple listctrl suffice?
:param parent: The parent window.
:type parent: wx.Window
:param project:
:type project:
:param id: An identifier for the panel. ID_ANY is taken to mean a default.
:type id: wx.WindowID, optional
:param pos: The panel position. The value wx.DefaultPosition indicates a default position, chosen by either the windowing system or wxWidgets, depending on platform.
:type pos: wx.Point, optional
:param size: The panel size. The value wx.DefaultSize indicates a default size, chosen by either the windowing system or wxWidgets, depending on platform.
:type size: wx.Size, optional
:param style: The window style. See wx.Panel.
:type style: int, optional
:param name: Window name
:type name: str, optional
"""
args = (parent, id)
kwds = dict(pos=pos, size=size, style=style, name=name)
self.parent = parent
self.project = project
# begin wxGlade: AlignmentDataPanel.__init__
kwds["style"] = kwds.get("style", 0) | wx.TAB_TRAVERSAL
wx.Panel.__init__(self, *args, **kwds)
self.filter_button = wx.BitmapButton(self, wx.ID_ANY,
get_icon("data-filter", 32))
self.alignment_table = SorterPanels.SorterPanel(self, wx.ID_ANY)
self.__set_properties()
self.__do_layout()
self.Bind(wx.EVT_BUTTON, self.on_filter_peaks, self.filter_button)
# end wxGlade
self.alignment_table.AppendColumn("Peak No.",
format=wx.LIST_FORMAT_LEFT,
width=80)
for experiment in self.project.experiment_name_list:
self.alignment_table.AppendColumn(experiment,
format=wx.LIST_FORMAT_RIGHT,
width=120)
self.Bind(SorterPanels.myEVT_SORTER_PANEL_DCLICK, self.on_item_dclick)
self.Bind(SorterPanels.myEVT_SORTER_PANEL_RCLICK, self.on_right_click)
self.Bind(wx.EVT_BUTTON, self.apply_filter, id=wx.ID_APPLY)
self.Bind(wx.EVT_BUTTON, self.apply_filter, id=wx.ID_OK)
self.default_filter_settings()
self._populate_table()
self.filter_dialog = Project.AlignmentFilterDialog(self)
def __init__(self, *args, **kwds):
"""
# TODO: Cannot get to the recent project list using tab traversal
:param parent: Can be None, a frame or another dialog box.
:type parent: wx.Window
:param id: An identifier for the dialog. A value of -1 is taken to mean a default.
:type id: wx.WindowID
:param title: The title of the dialog.
:type title: str
:param pos: The dialog position. The value DefaultPosition indicates a
default position, chosen by either the windowing system or wxWidgets,
depending on platform.
:type pos: wx.Point
:param size: The dialog size. The value DefaultSize indicates a default
size, chosen by either the windowing system or wxWidgets, depending on
platform.
:type size: wx.Size
:param style: The window style.
:type style: int
:param name: Used to associate a name with the window, allowing the
application user to set Motif resource values for individual dialog boxes.
:type name: str
"""
# begin wxGlade: _WelcomeDialog.__init__
kwds["style"] = kwds.get("style", 0) | wx.DEFAULT_DIALOG_STYLE | wx.MINIMIZE_BOX
wx.Dialog.__init__(self, *args, **kwds)
self.SetSize((777, 460))
self.left_panel = wx.Panel(self, wx.ID_ANY)
self.recent_project_ctrl = PanelListCtrl(self.left_panel, wx.ID_ANY, style=wx.NO_BORDER)
self.right_panel = wx.Panel(self, wx.ID_ANY)
self.version_label = wx.StaticText(self.right_panel, wx.ID_ANY, "Version <version>")
self.new_project_button = wx.Button(self.right_panel, wx.ID_ANY, u"âž• Create New Project", style=wx.BORDER_NONE | wx.BU_LEFT)
self.open_project_button = wx.Button(self.right_panel, wx.ID_ANY, u"📂 Open Project", style=wx.BORDER_NONE | wx.BU_LEFT)
self.new_experiment_button = wx.BitmapButton(self.right_panel, wx.ID_ANY, get_icon("new-experiment", 24))
self.method_editor_button = wx.BitmapButton(self.right_panel, wx.ID_ANY, get_icon("method-editor",24))
self.ammo_editor_editor = wx.BitmapButton(self.right_panel, wx.ID_ANY, get_icon("ammo-details",32))
self.bottom_panel = wx.Panel(self.right_panel, wx.ID_ANY)
self.show_dialog_checkbox = wx.CheckBox(self.bottom_panel, wx.ID_ANY, "Show this dialog at startup")
self.settings_button = wx.Button(self.bottom_panel, wx.ID_ANY, u"âš™ Settings", style=wx.BORDER_NONE)
self.help_button = wx.Button(self.bottom_panel, wx.ID_HELP, "", style=wx.BORDER_NONE)
self.__set_properties()
self.__do_layout()
self.Bind(wx.EVT_BUTTON, self.OnCreateProject, self.new_project_button)
self.Bind(wx.EVT_BUTTON, self.OnOpenProject, self.open_project_button)
self.Bind(wx.EVT_BUTTON, self.on_new_experiment, self.new_experiment_button)
self.Bind(wx.EVT_BUTTON, self.on_method_editor, self.method_editor_button)
self.Bind(wx.EVT_BUTTON, self.on_ammo_editor, self.ammo_editor_editor)
self.Bind(wx.EVT_CHECKBOX, self.on_toggle_show_dialog, self.show_dialog_checkbox)
self.Bind(wx.EVT_BUTTON, self.on_settings, self.settings_button)
self.Bind(wx.EVT_BUTTON, self.on_help, self.help_button)
# end wxGlade
self.recent_project_ctrl.Bind(wx.EVT_LIST_ITEM_ACTIVATED, self.OnOpenRecent)
self.recent_project_ctrl.Bind(wx.EVT_LIST_ITEM_RIGHT_CLICK, self.OnRightDown)
self.recent_project_ctrl.Bind(wx.EVT_LIST_KEY_DOWN, self.OnKeyDown)
self.recent_project_ctrl.Bind(wx.EVT_LIST_DELETE_ITEM, self.OnItemRemoved)
# self.recent_project_ctrl.Bind(wx.EVT_LEFT_DCLICK, self.OnOpenRecent)
# self.Bind(ULC.EVT_LIST_ITEM_SELECTED, self.OnItemSelected, self.recent_project_ctrl)
# self.recent_project_ctrl.Bind(wx.EVT_RIGHT_DOWN, self.OnRightDown)
#
# # for wxMSW
# self.recent_project_ctrl.Bind(wx.EVT_COMMAND_RIGHT_CLICK, self.OnRecentRightClick)
#
# # for wxGTK
# self.recent_project_ctrl.Bind(wx.EVT_RIGHT_UP, self.OnRecentRightClick)
#
# self.Bind(wx.EVT_CLOSE, self.OnClose)
self.selected_project = None
self._setup_context_menu()
def get_b64_icon(icon_name):
icon = get_icon(icon_name, 24)
buf = BytesIO()
icon.ConvertToImage().SaveFile(buf, "image/png")
return base64.b64encode(buf.getvalue()).decode("utf-8")
def _populate_toolbar(self):
self.add_tool(
ToolData(
name="Reset View",
icon=get_icon(wx.ART_GO_HOME, tb_icon_size[0]),
id=ID_View_Reset,
))
self.add_tool(
ToolData(
name="Previous View",
icon=get_icon(wx.ART_GO_TO_PARENT, tb_icon_size[0]),
id=ID_View_Previous,
))
self.add_tool(
ToolData(
name="Rescale y-axis",
icon=get_icon("rescale_y", tb_icon_size[0]),
id=ID_View_Rescale_y,
))
self.add_tool(
ToolData(
name="Rescale x-axis",
icon=get_icon("rescale_x", tb_icon_size[0]),
id=ID_View_Rescale_x,
))
self.AddSeparator()
self.add_radio_tool(
ToolData(
name="Select",
icon=get_icon("default-cursor", 24),
id=ID_View_Default,
))
self.add_radio_tool(
ToolData(
name="Zoom (Ctrl+Shift+Z)",
icon=get_icon("zoom", 24),
id=ID_View_Zoom,
))
self.add_radio_tool(
ToolData(
name="Pan (Ctrl+Shift+P)",
icon=get_icon("gimp-tool-move", 24),
id=ID_View_Pan,
))
self.add_radio_tool(
ToolData("View Spectrum On Click (Ctrl+Shift+S)",
get_icon("mass-spectrum", 24), ID_View_Spectrum))
# TODO: Dropdown with options for Click to view, enter scan No, enter RT
self.add_tool(
ToolData(
name="View Spectrum By Scan No.",
icon=get_icon("mass-spectrum-123", tb_icon_size[0]),
id=ID_View_Spectrum_by_num,
))
self.add_tool(
ToolData(
name="View Spectrum By RT",
icon=get_icon("mass-spectrum-rt", tb_icon_size[0]),
id=ID_View_Spectrum_by_rt,
))
def setup_image_list(self):
self.imglist = wx.ImageList(16, 16, True, 2)
self.proj_collapsed_icon = self.imglist.Add(get_icon(
wx.ART_FOLDER, 16)) # 0
self.proj_expanded_icon = self.imglist.Add(
get_icon(wx.ART_FILE_OPEN, 16)) # 1
self.info_icon = self.imglist.Add(get_icon(wx.ART_INFORMATION,
16)) # 2
self.method_icon = self.imglist.Add(get_icon("method",
16)) # 3 - don't move
self.peak_list_icon = self.imglist.Add(get_icon(wx.ART_LIST_VIEW,
16)) # 4
self.data_icon = self.imglist.Add(get_icon(wx.ART_EXECUTABLE_FILE,
16)) # 5
self.tic_icon = self.imglist.Add(get_icon("chromatogram", 16)) # 6
self.ammo_icon = self.imglist.Add(get_icon("ammo-details",
16)) # 7 - don't move
self.alignment_icon = self.imglist.Add(get_icon(wx.ART_LIST_VIEW,
16)) # 8
self.compounds_icon = self.imglist.Add(
get_icon("Conical_flask_red", 16)) # 9
self.expr_icon = self.imglist.Add(get_icon(wx.ART_REPORT_VIEW,
16)) # 10
self.consolidate_icon = self.imglist.Add(get_icon(
"Merge-arrows-3", 16)) # 11
self.AssignImageList(self.imglist)
def get_new_expr_icon():
icon = get_icon("new-experiment", 24)
buf = BytesIO()
icon.ConvertToImage().SaveFile(buf, "image/png")
return base64.b64encode(buf.getvalue()).decode("utf-8")
