def action(args): ''' Query related actions ''' sifter_project = SifterAnalysisProject() sifter_project.open_project(project_identifier=args.project_directory) # Pfam query route if args.query_fasta: sifter_project.make_queries_pfamscan(query_file=args.query_fasta)
def action(args): """ Project related actions """ sifter_project = SifterAnalysisProject() print "Parsed args:", args, "\n" # Project Create if hasattr(args, "create_project"): sifter_project.create_project( project_identifier=args.project_directory, settings_source=args.project_settings_file )