kmc.update_V()
kmc.simulate_discrete(prehops=prehops)
for l in range(cf.avg):
kmc.simulate_discrete(hops=hops)
output[k * cf.avg + l] = kmc.current[cf.output]
outputArray[i, j] = output
fitness_list.append(cf.Fitness(output, cf.target))
genePool.fitness[j] = min(fitness_list)
fitnessArray[i, j] = genePool.fitness[j]
# Status print
print("Generation nr. " + str(i + 1) + " completed")
print("Highest fitness: " + str(max(genePool.fitness)))
# Evolve to the next generation
genePool.NextGen()
# Save experiment
SaveLib.saveArrays(filepath,
geneArray=geneArray,
fitnessArray=fitnessArray,
outputArray=outputArray,
target=cf.target,
P=P,
Q=Q)
domain = kmc_dn_utils.visualize_basic(kmc)
plt.figure()
plt.plot(output)
plt.show()
voltage[:, k * cf.avg + l] = kmc.electrodes[:, 3]
voltageArray[i, j] = voltage
currentArray[i, j] = output
#fitness_list.append(cf.Fitness(voltage, output, cf.target))
fitness_list.append(cf.Fitness(output[2], cf.target))
genePool.fitness[j] = min(fitness_list)
fitnessArray[i, j] = genePool.fitness[j]
# Status print
print("Generation nr. " + str(i + 1) + " completed")
print("Highest fitness: " + str(max(genePool.fitness)))
# Evolve to the next generation
genePool.NextGen()
# Save experiment
SaveLib.saveArrays(filepath,
geneArray=geneArray,
fitnessArray=fitnessArray,
currentArray=currentArray,
voltageArray=voltageArray,
target=cf.target,
P=P,
Q=Q)
domain = kmc_dn_utils.visualize_basic(kmc)
plt.figure()
plt.plot(output)
plt.show()
current_array = kmc_dn_utils.IV(kmc,
0,
voltagelist,
prehops=prehops,
hops=hops)
output = current_array[1]
outputArray[i, j] = output
fitness_list.append(cf.Fitness(output, target))
genePool.fitness[j] = min(fitness_list)
fitnessArray[i, j] = genePool.fitness[j]
# Status print
print("Generation nr. " + str(i + 1) + " completed")
print("Highest fitness: " + str(max(genePool.fitness)))
# Evolve to the next generation
genePool.NextGen()
# Save experiment
SaveLib.saveArrays(
filepath,
geneArray=geneArray,
fitnessArray=fitnessArray,
outputArray=outputArray,
voltagelist=voltagelist,
target=target,
)
print('All done!')