def periodicUpdate(self):
"""
Run on the defined intervals.
"""
killProc = False
if self.disableStep:
# Then we aren't doing CPU monitoring
# on this step
return
if self.currentStepName == None:
# We're between steps
return
if self.currentStepSpace == None:
# Then build the step space
self.currentStepSpace = getStepSpace(self.stepHelper.name())
stepPID = getStepPID(self.currentStepSpace, self.currentStepName)
if stepPID == None:
# Then we have no step PID, we can do nothing
return
# Now we run the monitor command and collate the data
cmd = self.monitorBase % (stepPID, stepPID)
stdout, stderr, retcode = subprocessAlgos.runCommand(cmd)
output = stdout.split()
if not len(output) > 7:
# Then something went wrong in getting the ps data
msg = "Error when grabbing output from process ps\n"
msg += "output = %s\n" % output
msg += "command = %s\n" % self.monitorCommand
logging.error(msg)
return
rss = float(output[2])
vsize = float(output[3])
logging.info("Retrieved following performance figures:")
logging.info("RSS: %s; VSize: %s; PCPU: %s; PMEM: %s" % (output[2], output[3],
output[4], output[5]))
msg = 'Error in CMSSW step %s\n' % self.currentStepName
if self.maxRSS != None and rss >= self.maxRSS:
msg += "Job has exceeded maxRSS: %s\n" % self.maxRSS
msg += "Job has RSS: %s\n" % rss
killProc = True
if self.maxVSize != None and vsize >= self.maxVSize:
msg += "Job has exceeded maxVSize: %s\n" % self.maxVSize
msg += "Job has VSize: %s\n" % vsize
killProc = True
if killProc:
logging.error(msg)
report = Report.Report()
# Find the global report
logPath = os.path.join(self.currentStepSpace.location,
'../../../',
os.path.basename(self.logPath))
try:
if os.path.isfile(logPath):
# We should be able to find existant job report.
# If not, we're in trouble
logging.debug("Found pre-existant error report in DashboardMonitor termination.")
report.load(logPath)
# Create a new step that won't be overridden by an exiting CMSSW
if not report.retrieveStep(step = "PerformanceError"):
report.addStep(reportname = "PerformanceError")
report.addError(stepName = "PerformanceError", exitCode = 99900,
errorType = "PerformanceKill", errorDetails = msg)
report.save(logPath)
except Exception, ex:
# Basically, we can't write a log report and we're hosed
# Kill anyway, and hope the logging file gets written out
msg2 = "Exception while writing out jobReport.\n"
msg2 += "Aborting job anyway: unlikely you'll get any error report.\n"
msg2 += str(ex)
msg2 += str(traceback.format_exc()) + '\n'
logging.error(msg2)
try:
logging.error("Attempting to kill job using SIGUSR2")
os.kill(stepPID, signal.SIGUSR2)
except Exception:
os.kill(stepPID, signal.SIGTERM)
def periodicUpdate(self):
"""
Run on the defined intervals.
"""
killProc = False
killHard = False
reason = ''
errorCodeLookup = {'PSS': 50660,
'Wallclock time': 50664,
'': 99999}
if self.disableStep:
# Then we aren't doing CPU monitoring
# on this step
return
if self.currentStepName is None:
# We're between steps
return
if self.currentStepSpace is None:
# Then build the step space
self.currentStepSpace = getStepSpace(self.stepHelper.name())
stepPID = getStepPID(self.currentStepSpace, self.currentStepName)
if stepPID is None:
# Then we have no step PID, we can do nothing
return
# Now we run the ps monitor command and collate the data
# Gathers RSS, %CPU and %MEM statistics from ps
ps_cmd = self.monitorBase % (stepPID, stepPID)
stdout, _stderr, _retcode = subprocessAlgos.runCommand(ps_cmd)
ps_output = stdout.split()
if not len(ps_output) > 6:
# Then something went wrong in getting the ps data
msg = "Error when grabbing output from process ps\n"
msg += "output = %s\n" % ps_output
msg += "command = %s\n" % ps_cmd
logging.error(msg)
return
# run the command to gather PSS memory statistics from /proc/<pid>/smaps
smaps_cmd = self.pssMemoryCommand % (stepPID)
stdout, _stderr, _retcode = subprocessAlgos.runCommand(smaps_cmd)
smaps_output = stdout.split()
if not len(smaps_output) == 1:
# Then something went wrong in getting the smaps data
msg = "Error when grabbing output from smaps\n"
msg += "output = %s\n" % smaps_output
msg += "command = %s\n" % smaps_cmd
logging.error(msg)
return
# smaps also returns data in kiloBytes, let's make it megaBytes
# I'm also confused with these megabytes and mebibytes...
pss = int(smaps_output[0]) // 1000
logging.info("PSS: %s; RSS: %s; PCPU: %s; PMEM: %s", smaps_output[0], ps_output[2], ps_output[3], ps_output[4])
msg = 'Error in CMSSW step %s\n' % self.currentStepName
msg += 'Number of Cores: %s\n' % self.numOfCores
if self.maxPSS is not None and pss >= self.maxPSS:
msg += "Job has exceeded maxPSS: %s MB\n" % self.maxPSS
msg += "Job has PSS: %s MB\n" % pss
killProc = True
reason = 'PSS'
elif self.hardTimeout is not None and self.softTimeout is not None:
currentTime = time.time()
if (currentTime - self.startTime) > self.softTimeout:
killProc = True
reason = 'Wallclock time'
msg += "Job has been running for more than: %s\n" % str(self.softTimeout)
msg += "Job has been running for: %s\n" % str(currentTime - self.startTime)
if (currentTime - self.startTime) > self.hardTimeout:
killHard = True
msg += "Job exceeded soft timeout"
if not killProc:
# then job is behaving well, there is nothing to do
return
# make sure we persist the performance error only once
if not self.killRetry:
logging.error(msg)
report = Report.Report()
# Find the global report
logPath = os.path.join(self.currentStepSpace.location,
'../../../',
os.path.basename(self.logPath))
try:
if os.path.isfile(logPath):
# We should be able to find existant job report.
# If not, we're in trouble
logging.debug("Found pre-existant error report in PerformanceMonitor termination.")
report.load(logPath)
# Create a new step that won't be overridden by an exiting CMSSW
if not report.retrieveStep(step="PerformanceError"):
report.addStep(reportname="PerformanceError")
report.addError(stepName="PerformanceError", exitCode=errorCodeLookup[reason],
errorType="PerformanceKill", errorDetails=msg)
report.save(logPath)
except Exception as ex:
# Basically, we can't write a log report and we're hosed
# Kill anyway, and hope the logging file gets written out
msg2 = "Exception while writing out jobReport.\n"
msg2 += "Aborting job anyway: unlikely you'll get any error report.\n"
msg2 += "Error: %s" % str(ex)
logging.exception(msg2)
try:
if not killHard and not self.killRetry:
logging.error("Attempting to kill step using SIGUSR2")
os.kill(stepPID, signal.SIGUSR2)
else:
logging.error("Attempting to kill step using SIGTERM")
os.kill(stepPID, signal.SIGTERM)
except Exception:
logging.error("Attempting to kill step using SIGTERM")
os.kill(stepPID, signal.SIGTERM)
finally:
self.killRetry = True
return
def periodicUpdate(self):
"""
Run on the defined intervals.
"""
killProc = False
killHard = False
reason = ''
errorCodeLookup = {'RSS': 50660,
'VSZ': 50661,
'Wallclock time': 50664,
'': 99999}
if self.disableStep:
# Then we aren't doing CPU monitoring
# on this step
return
if self.currentStepName is None:
# We're between steps
return
if self.currentStepSpace is None:
# Then build the step space
self.currentStepSpace = getStepSpace(self.stepHelper.name())
stepPID = getStepPID(self.currentStepSpace, self.currentStepName)
if stepPID is None:
# Then we have no step PID, we can do nothing
return
# Now we run the monitor command and collate the data
cmd = self.monitorBase % (stepPID, stepPID)
stdout, stderr, retcode = subprocessAlgos.runCommand(cmd)
output = stdout.split()
if not len(output) > 7:
# Then something went wrong in getting the ps data
msg = "Error when grabbing output from process ps\n"
msg += "output = %s\n" % output
msg += "command = %s\n" % self.monitorCommand
logging.error(msg)
return
# FIXME: making it backwards compatible. Keep only the "else" block in HG1801
if self.maxRSS is not None and self.maxRSS >= (1024 * 1024):
# then workload value is still in KiB (old way)
rss = int(output[2])
vsize = int(output[3])
else:
rss = int(output[2]) // 1024 # convert it to MiB
vsize = int(output[3]) // 1024 # convert it to MiB
logging.info("Retrieved following performance figures:")
logging.info("RSS: %s; VSize: %s; PCPU: %s; PMEM: %s", output[2], output[3],
output[4], output[5])
msg = 'Error in CMSSW step %s\n' % self.currentStepName
msg += 'Number of Cores: %s\n' % self.numOfCores
if self.maxRSS is not None and rss >= self.maxRSS:
msg += "Job has exceeded maxRSS: %s\n" % self.maxRSS
msg += "Job has RSS: %s\n" % rss
killProc = True
reason = 'RSS'
elif self.maxVSize is not None and vsize >= self.maxVSize:
msg += "Job has exceeded maxVSize: %s\n" % self.maxVSize
msg += "Job has VSize: %s\n" % vsize
killProc = True
reason = 'VSZ'
elif self.hardTimeout is not None and self.softTimeout is not None:
currentTime = time.time()
if (currentTime - self.startTime) > self.softTimeout:
killProc = True
reason = 'Wallclock time'
msg += "Job has been running for more than: %s\n" % str(self.softTimeout)
msg += "Job has been running for: %s\n" % str(currentTime - self.startTime)
if (currentTime - self.startTime) > self.hardTimeout:
killHard = True
msg += "Job exceeded soft timeout"
if killProc:
logging.error(msg)
report = Report.Report()
# Find the global report
logPath = os.path.join(self.currentStepSpace.location,
'../../../',
os.path.basename(self.logPath))
try:
if os.path.isfile(logPath):
# We should be able to find existant job report.
# If not, we're in trouble
logging.debug("Found pre-existant error report in PerformanceMonitor termination.")
report.load(logPath)
# Create a new step that won't be overridden by an exiting CMSSW
if not report.retrieveStep(step="PerformanceError"):
report.addStep(reportname="PerformanceError")
report.addError(stepName="PerformanceError", exitCode=errorCodeLookup[reason],
errorType="PerformanceKill", errorDetails=msg)
report.save(logPath)
except Exception as ex:
# Basically, we can't write a log report and we're hosed
# Kill anyway, and hope the logging file gets written out
msg2 = "Exception while writing out jobReport.\n"
msg2 += "Aborting job anyway: unlikely you'll get any error report.\n"
msg2 += str(ex)
msg2 += str(traceback.format_exc()) + '\n'
logging.error(msg2)
try:
if not killHard:
logging.error("Attempting to kill step using SIGUSR2")
os.kill(stepPID, signal.SIGUSR2)
else:
logging.error("Attempting to kill step using SIGTERM")
os.kill(stepPID, signal.SIGTERM)
except Exception:
logging.error("Attempting to kill step using SIGTERM")
os.kill(stepPID, signal.SIGTERM)
return
def periodicUpdate(self):
"""
Run on the defined intervals.
"""
killProc = False
killHard = False
if self.disableStep:
# Then we aren't doing CPU monitoring
# on this step
return
if self.currentStepName == None:
# We're between steps
return
if self.currentStepSpace == None:
# Then build the step space
self.currentStepSpace = getStepSpace(self.stepHelper.name())
stepPID = getStepPID(self.currentStepSpace, self.currentStepName)
if stepPID == None:
# Then we have no step PID, we can do nothing
return
# Now we run the monitor command and collate the data
cmd = self.monitorBase % (stepPID, stepPID)
stdout, stderr, retcode = subprocessAlgos.runCommand(cmd)
output = stdout.split()
if not len(output) > 7:
# Then something went wrong in getting the ps data
msg = "Error when grabbing output from process ps\n"
msg += "output = %s\n" % output
msg += "command = %s\n" % self.monitorCommand
logging.error(msg)
return
rss = float(output[2])
vsize = float(output[3])
logging.info("Retrieved following performance figures:")
logging.info("RSS: %s; VSize: %s; PCPU: %s; PMEM: %s" %
(output[2], output[3], output[4], output[5]))
msg = 'Error in CMSSW step %s\n' % self.currentStepName
if self.maxRSS != None and rss >= self.maxRSS:
msg += "Job has exceeded maxRSS: %s\n" % self.maxRSS
msg += "Job has RSS: %s\n" % rss
killProc = True
if self.maxVSize != None and vsize >= self.maxVSize:
msg += "Job has exceeded maxVSize: %s\n" % self.maxVSize
msg += "Job has VSize: %s\n" % vsize
killProc = True
#Let's check the running time
currentTime = time.time()
if self.hardTimeout != None and self.softTimeout != None:
if (currentTime - self.startTime) > self.softTimeout:
killProc = True
msg += "Job has been running for more than: %s\n" % str(
self.softTimeout)
msg += "Job has been running for: %s\n" % str(currentTime -
self.startTime)
if (currentTime - self.startTime) > self.hardTimeout:
killHard = True
msg += "Job exceeded soft timeout"
if killProc:
logging.error(msg)
report = Report.Report()
# Find the global report
logPath = os.path.join(self.currentStepSpace.location, '../../../',
os.path.basename(self.logPath))
try:
if os.path.isfile(logPath):
# We should be able to find existant job report.
# If not, we're in trouble
logging.debug(
"Found pre-existant error report in PerformanceMonitor termination."
)
report.load(logPath)
# Create a new step that won't be overridden by an exiting CMSSW
if not report.retrieveStep(step="PerformanceError"):
report.addStep(reportname="PerformanceError")
report.addError(stepName="PerformanceError",
exitCode=99900,
errorType="PerformanceKill",
errorDetails=msg)
report.save(logPath)
except Exception, ex:
# Basically, we can't write a log report and we're hosed
# Kill anyway, and hope the logging file gets written out
msg2 = "Exception while writing out jobReport.\n"
msg2 += "Aborting job anyway: unlikely you'll get any error report.\n"
msg2 += str(ex)
msg2 += str(traceback.format_exc()) + '\n'
logging.error(msg2)
try:
if not killHard:
logging.error("Attempting to kill step using SIGUSR2")
os.kill(stepPID, signal.SIGUSR2)
else:
logging.error("Attempting to kill step using SIGTERM")
os.kill(stepPID, signal.SIGTERM)
except Exception:
logging.error("Attempting to kill step using SIGTERM")
os.kill(stepPID, signal.SIGTERM)
def periodicUpdate(self):
"""
Run on the defined intervals.
"""
killProc = False
killHard = False
reason = ''
errorCodeLookup = {
'RSS': 50660,
'VSZ': 50661,
'Wallclock time': 50664,
'': 99999
}
if self.disableStep:
# Then we aren't doing CPU monitoring
# on this step
return
if self.currentStepName is None:
# We're between steps
return
if self.currentStepSpace is None:
# Then build the step space
self.currentStepSpace = getStepSpace(self.stepHelper.name())
stepPID = getStepPID(self.currentStepSpace, self.currentStepName)
if stepPID is None:
# Then we have no step PID, we can do nothing
return
# Now we run the monitor command and collate the data
cmd = self.monitorBase % (stepPID, stepPID)
stdout, stderr, retcode = subprocessAlgos.runCommand(cmd)
output = stdout.split()
if not len(output) > 7:
# Then something went wrong in getting the ps data
msg = "Error when grabbing output from process ps\n"
msg += "output = %s\n" % output
msg += "command = %s\n" % self.monitorCommand
logging.error(msg)
return
# FIXME: making it backwards compatible. Keep only the "else" block in HG1801
if self.maxRSS is not None and self.maxRSS >= (1024 * 1024):
# then workload value is still in KiB (old way)
rss = int(output[2])
vsize = int(output[3])
else:
# ps returns data in kiloBytes, let's make it megaBytes
# I'm so confused with these megabytes and mebibytes...
rss = int(output[2]) // 1000 # convert it to MiB
vsize = int(output[3]) // 1000 # convert it to MiB
logging.info("Retrieved following performance figures:")
logging.info("RSS: %s; VSize: %s; PCPU: %s; PMEM: %s", output[2],
output[3], output[4], output[5])
msg = 'Error in CMSSW step %s\n' % self.currentStepName
msg += 'Number of Cores: %s\n' % self.numOfCores
if self.maxRSS is not None and rss >= self.maxRSS:
msg += "Job has exceeded maxRSS: %s\n" % self.maxRSS
msg += "Job has RSS: %s\n" % rss
killProc = True
reason = 'RSS'
elif self.maxVSize is not None and vsize >= self.maxVSize:
msg += "Job has exceeded maxVSize: %s\n" % self.maxVSize
msg += "Job has VSize: %s\n" % vsize
killProc = True
reason = 'VSZ'
elif self.hardTimeout is not None and self.softTimeout is not None:
currentTime = time.time()
if (currentTime - self.startTime) > self.softTimeout:
killProc = True
reason = 'Wallclock time'
msg += "Job has been running for more than: %s\n" % str(
self.softTimeout)
msg += "Job has been running for: %s\n" % str(currentTime -
self.startTime)
if (currentTime - self.startTime) > self.hardTimeout:
killHard = True
msg += "Job exceeded soft timeout"
if killProc:
logging.error(msg)
report = Report.Report()
# Find the global report
logPath = os.path.join(self.currentStepSpace.location, '../../../',
os.path.basename(self.logPath))
try:
if os.path.isfile(logPath):
# We should be able to find existant job report.
# If not, we're in trouble
logging.debug(
"Found pre-existant error report in PerformanceMonitor termination."
)
report.load(logPath)
# Create a new step that won't be overridden by an exiting CMSSW
if not report.retrieveStep(step="PerformanceError"):
report.addStep(reportname="PerformanceError")
report.addError(stepName="PerformanceError",
exitCode=errorCodeLookup[reason],
errorType="PerformanceKill",
errorDetails=msg)
report.save(logPath)
except Exception as ex:
# Basically, we can't write a log report and we're hosed
# Kill anyway, and hope the logging file gets written out
msg2 = "Exception while writing out jobReport.\n"
msg2 += "Aborting job anyway: unlikely you'll get any error report.\n"
msg2 += str(ex)
msg2 += str(traceback.format_exc()) + '\n'
logging.error(msg2)
try:
if not killHard:
logging.error("Attempting to kill step using SIGUSR2")
os.kill(stepPID, signal.SIGUSR2)
else:
logging.error("Attempting to kill step using SIGTERM")
os.kill(stepPID, signal.SIGTERM)
except Exception:
logging.error("Attempting to kill step using SIGTERM")
os.kill(stepPID, signal.SIGTERM)
return