import sys
import pyqtgraph as pg
from neuroanalysis.ui.fitting import FitExplorer
from aisynphys.database import default_db as db
from aisynphys.avg_response_fit import get_pair_avg_fits
from aisynphys.ui.avg_response_fit import AvgResponseFitUi
app = pg.mkQApp()
pg.dbg()
session = db.session()
expt_id, pre_cell_id, post_cell_id = sys.argv[1:4]
pair = db.experiment_from_ext_id(expt_id, session=session).pairs[pre_cell_id,
post_cell_id]
ui = AvgResponseFitUi()
fits = get_pair_avg_fits(pair, session=session, ui=ui)
ui.widget.show()
fe = FitExplorer(fits['vc', -55]['fit_result'])
fe.show()
if sys.flags.interactive == 0:
app.exec_()
parser.add_argument('pre_cell_id', type=str, nargs='?', default=None)
parser.add_argument('post_cell_id', type=str, nargs='?', default=None)
args = parser.parse_args(sys.argv[1:])
if args.dbg:
pg.dbg()
default_session = db.session()
notes_session = notes_db.db.session()
# timestamps = [r.acq_timestamp for r in db.query(db.Experiment.acq_timestamp).all()]
timestamps = []
mw = MainWindow(default_session, notes_session)
if args.timestamps is not None:
timestamps = args.timestamps
elif args.expt_id is not None:
timestamps = [args.expt_id]
q = default_session.query(db.Experiment).filter(db.Experiment.acq_timestamp.in_(timestamps))
expts = q.all()
mw.set_expts(expts)
if None not in (args.expt_id, args.pre_cell_id, args.post_cell_id):
expt = db.experiment_from_ext_id(args.expt_id)
pair = expt.pairs[args.pre_cell_id, args.post_cell_id]
mw.experiment_browser.select_pair(pair.id)
if sys.flags.interactive == 0:
app.exec_()
decay_tau=fit_par.fit_decay_tau,
xoffset=fit_par.fit_latency,
yoffset=fit_par.fit_yoffset,
rise_power=2,
)
c = plt.plot(ts.time_values, fit, pen=(0, 255, 0, 100))
c.setZValue(10)
c.setPos(*shift)
if __name__ == '__main__':
import sys
app = pg.mkQApp()
pg.dbg()
win = DynamicsWindow()
win.show()
if len(sys.argv) > 1:
expt_id, pre_cell, post_cell = sys.argv[1:]
expt = db.experiment_from_ext_id(expt_id)
win.browser.populate([expt])
pair = expt.pairs[pre_cell, post_cell]
win.browser.select_pair(pair.id)
else:
win.browser.populate()
if sys.flags.interactive == 0:
app.exec_()