args = sys.argv
obj = args[1]
filt = args[2]
if len(args)>3:
instrUsed = str(args[3])
else:
instrUsed = "ARIES"
### Find the directory and file
fitsDir = ao.koiFilterDir(obj,filt,instrUsed)
fitsFile = ao.finalKOIimageFile(obj,filt)
### Read settings file to get plate scale
settingsDict={}
settingsFile = ao.koiDir(obj,instrUsed)+"settings_"+obj+".tsv"
print settingsFile+"\n"
settingsDict=ao.readSettingsFile(settingsFile)
#### Change if some other Speckle instrument besides Steve Howell's first one (i.e., if Gemini)
if instrUsed == "Speckle":
try:
plateScale = eval(settingsDict['Plate_scale_Speckle'])
except:
print "\n\nWARNING! using hardcoded plate scale in magLimits.py\n\n"
plateScale = 0.0228156
#### Should we ever have plate scales differ on different filters, this will need to change
else:
plateScale = eval(settingsDict['Plate_scale_Ks'])
sys.exit("I don't know what objects to analyze. Please run step5-objects.py")
## Now change to the night directory
os.chdir(nightPath)
## Copy all files to objects/OBJECT/FILTER/
g = open("summary_"+useNight+".txt","w")
for nn,ff in enumerate(useObjList):
elems = ff.split("_")
prefix = elems[0]
obj = elems[1]
filt = elems[2].split(".")[0] ### gets rid of the trailing .txt
print "\nCopying files for",obj, filt,"\n"
objDir = ao.koiDir(obj,instr="ARIES")
objFilterDir = ao.koiFilterDir(obj,filt,instr="ARIES")
savedDir = objFilterDir+"saved/"
print "Making archive directories if they don't already exist"
if os.path.exists(objDir) == False:
os.mkdir(objDir)
if os.path.exists(objFilterDir) == False:
os.mkdir(objFilterDir)
if os.path.exists(savedDir) == False:
os.mkdir(savedDir)
## The shiftlist, object list, and final image are saved in the main folder
print "Copying shiftfile"
os.system("cp Shiftlist_"+obj+"_"+filt+".txt "+objFilterDir)
print "Copying list of frames"
os.system("cp "+ff+" "+objFilterDir+ff)