def from_runner_api(proto, unused_context):
assert proto.view_fn.spec.urn == urns.PICKLED_PYTHON_VIEWFN
assert proto.window_mapping_fn.spec.urn == urns.PICKLED_WINDOW_MAPPING_FN
return SideInputData(
proto.access_pattern.urn,
pickler.loads(proto.window_mapping_fn.spec.payload),
*pickler.loads(proto.view_fn.spec.payload))
def __init__(self, fn, *args, **kwargs):
if isinstance(fn, type) and issubclass(fn, WithTypeHints):
# Don't treat Fn class objects as callables.
raise ValueError('Use %s() not %s.' % (fn.__name__, fn.__name__))
self.fn = self.make_fn(fn)
# Now that we figure out the label, initialize the super-class.
super(PTransformWithSideInputs, self).__init__()
if (any([isinstance(v, pvalue.PCollection) for v in args]) or
any([isinstance(v, pvalue.PCollection) for v in kwargs.itervalues()])):
raise error.SideInputError(
'PCollection used directly as side input argument. Specify '
'AsIter(pcollection) or AsSingleton(pcollection) to indicate how the '
'PCollection is to be used.')
self.args, self.kwargs, self.side_inputs = util.remove_objects_from_args(
args, kwargs, pvalue.AsSideInput)
self.raw_side_inputs = args, kwargs
# Prevent name collisions with fns of the form '<function <lambda> at ...>'
self._cached_fn = self.fn
# Ensure fn and side inputs are picklable for remote execution.
self.fn = pickler.loads(pickler.dumps(self.fn))
self.args = pickler.loads(pickler.dumps(self.args))
self.kwargs = pickler.loads(pickler.dumps(self.kwargs))
# For type hints, because loads(dumps(class)) != class.
self.fn = self._cached_fn
def test_nested_class(self):
"""Tests that a nested class object is pickled correctly."""
self.assertEquals(
'X:abc',
loads(dumps(module_test.TopClass.NestedClass('abc'))).datum)
self.assertEquals(
'Y:abc',
loads(dumps(module_test.TopClass.MiddleClass.NestedClass('abc'))).datum)
def visit_transform(self, transform_node):
try:
# Transforms must be picklable.
pickler.loads(pickler.dumps(transform_node.transform,
enable_trace=False),
enable_trace=False)
except Exception:
Visitor.ok = False
def visit_transform(self, transform_node):
if transform_node.side_inputs:
# No side inputs (yet).
Visitor.ok = False
try:
# Transforms must be picklable.
pickler.loads(pickler.dumps(transform_node.transform))
except Exception:
Visitor.ok = False
def _get_concat_source(self):
if self._concat_source is None:
pattern = self._pattern.get()
single_file_sources = []
match_result = FileSystems.match([pattern])[0]
files_metadata = match_result.metadata_list
# We create a reference for FileBasedSource that will be serialized along
# with each _SingleFileSource. To prevent this FileBasedSource from having
# a reference to ConcatSource (resulting in quadratic space complexity)
# we clone it here.
file_based_source_ref = pickler.loads(pickler.dumps(self))
for file_metadata in files_metadata:
file_name = file_metadata.path
file_size = file_metadata.size_in_bytes
if file_size == 0:
continue # Ignoring empty file.
# We determine splittability of this specific file.
splittable = (
self.splittable and
_determine_splittability_from_compression_type(
file_name, self._compression_type))
single_file_source = _SingleFileSource(
file_based_source_ref, file_name,
0,
file_size,
min_bundle_size=self._min_bundle_size,
splittable=splittable)
single_file_sources.append(single_file_source)
self._concat_source = concat_source.ConcatSource(single_file_sources)
return self._concat_source
def __init__(self, operation_name, spec, counter_factory, state_sampler):
super(PGBKCVOperation, self).__init__(
operation_name, spec, counter_factory, state_sampler)
# Combiners do not accept deferred side-inputs (the ignored fourth
# argument) and therefore the code to handle the extra args/kwargs is
# simpler than for the DoFn's of ParDo.
fn, args, kwargs = pickler.loads(self.spec.combine_fn)[:3]
self.combine_fn = curry_combine_fn(fn, args, kwargs)
if (getattr(fn.add_input, 'im_func', None)
is core.CombineFn.add_input.__func__):
# Old versions of the SDK have CombineFns that don't implement add_input.
self.combine_fn_add_input = (
lambda a, e: self.combine_fn.add_inputs(a, [e]))
else:
self.combine_fn_add_input = self.combine_fn.add_input
# Optimization for the (known tiny accumulator, often wide keyspace)
# combine functions.
# TODO(b/36567833): Bound by in-memory size rather than key count.
self.max_keys = (
1000 * 1000 if
isinstance(fn, (combiners.CountCombineFn, combiners.MeanCombineFn)) or
# TODO(b/36597732): Replace this 'or' part by adding the 'cy' optimized
# combiners to the short list above.
(isinstance(fn, core.CallableWrapperCombineFn) and
fn._fn in (min, max, sum)) else 100 * 1000) # pylint: disable=protected-access
self.key_count = 0
self.table = {}
def run_pipeline(self, pipeline):
"""Execute test pipeline and verify test matcher"""
options = pipeline._options.view_as(TestOptions)
on_success_matcher = options.on_success_matcher
is_streaming = options.view_as(StandardOptions).streaming
# [BEAM-1889] Do not send this to remote workers also, there is no need to
# send this option to remote executors.
options.on_success_matcher = None
self.result = super(TestDirectRunner, self).run_pipeline(pipeline)
try:
if not is_streaming:
self.result.wait_until_finish()
if on_success_matcher:
from hamcrest import assert_that as hc_assert_that
hc_assert_that(self.result, pickler.loads(on_success_matcher))
finally:
if not PipelineState.is_terminal(self.result.state):
self.result.cancel()
self.result.wait_until_finish()
return self.result
def run_pipeline(self, pipeline):
docker_image = (
pipeline.options.view_as(PortableOptions).harness_docker_image
or self.default_docker_image())
job_endpoint = pipeline.options.view_as(PortableOptions).job_endpoint
if not job_endpoint:
raise ValueError(
'job_endpoint should be provided while creating runner.')
proto_context = pipeline_context.PipelineContext(
default_environment_url=docker_image)
proto_pipeline = pipeline.to_runner_api(context=proto_context)
if not self.is_embedded_fnapi_runner:
# Java has different expectations about coders
# (windowed in Fn API, but *un*windowed in runner API), whereas the
# embedded FnApiRunner treats them consistently, so we must guard this
# for now, until FnApiRunner is fixed.
# See also BEAM-2717.
for pcoll in proto_pipeline.components.pcollections.values():
if pcoll.coder_id not in proto_context.coders:
# This is not really a coder id, but a pickled coder.
coder = coders.registry.get_coder(pickler.loads(pcoll.coder_id))
pcoll.coder_id = proto_context.coders.get_id(coder)
proto_context.coders.populate_map(proto_pipeline.components.coders)
# Some runners won't detect the GroupByKey transform unless it has no
# subtransforms. Remove all sub-transforms until BEAM-4605 is resolved.
for _, transform_proto in list(
proto_pipeline.components.transforms.items()):
if transform_proto.spec.urn == common_urns.primitives.GROUP_BY_KEY.urn:
for sub_transform in transform_proto.subtransforms:
del proto_pipeline.components.transforms[sub_transform]
del transform_proto.subtransforms[:]
# TODO: Define URNs for options.
options = {'beam:option:' + k + ':v1': v
for k, v in pipeline._options.get_all_options().iteritems()
if v is not None}
job_service = beam_job_api_pb2_grpc.JobServiceStub(
grpc.insecure_channel(job_endpoint))
prepare_response = job_service.Prepare(
beam_job_api_pb2.PrepareJobRequest(
job_name='job', pipeline=proto_pipeline,
pipeline_options=job_utils.dict_to_struct(options)))
if prepare_response.artifact_staging_endpoint.url:
stager = portable_stager.PortableStager(
grpc.insecure_channel(prepare_response.artifact_staging_endpoint.url),
prepare_response.staging_session_token)
retrieval_token, _ = stager.stage_job_resources(
pipeline._options,
staging_location='')
else:
retrieval_token = None
run_response = job_service.Run(
beam_job_api_pb2.RunJobRequest(
preparation_id=prepare_response.preparation_id,
retrieval_token=retrieval_token))
return PipelineResult(job_service, run_response.job_id)
def start_bundle(self):
transform = self._applied_ptransform.transform
self._tagged_receivers = _TaggedReceivers(self._evaluation_context)
for output_tag in self._applied_ptransform.outputs:
output_pcollection = pvalue.PCollection(None, tag=output_tag)
output_pcollection.producer = self._applied_ptransform
self._tagged_receivers[output_tag] = (
self._evaluation_context.create_bundle(output_pcollection))
self._tagged_receivers[output_tag].tag = output_tag
self._counter_factory = counters.CounterFactory()
# TODO(aaltay): Consider storing the serialized form as an optimization.
dofn = pickler.loads(pickler.dumps(transform.dofn))
pipeline_options = self._evaluation_context.pipeline_options
if (pipeline_options is not None
and pipeline_options.view_as(TypeOptions).runtime_type_check):
dofn = TypeCheckWrapperDoFn(dofn, transform.get_type_hints())
dofn = OutputCheckWrapperDoFn(dofn, self._applied_ptransform.full_label)
self.runner = DoFnRunner(
dofn, transform.args, transform.kwargs,
self._side_inputs,
self._applied_ptransform.inputs[0].windowing,
tagged_receivers=self._tagged_receivers,
step_name=self._applied_ptransform.full_label,
state=DoFnState(self._counter_factory),
scoped_metrics_container=self.scoped_metrics_container)
self.runner.start()
def _create_pardo_operation(
factory, transform_id, transform_proto, consumers,
serialized_fn, side_inputs_proto=None):
if side_inputs_proto:
input_tags_to_coders = factory.get_input_coders(transform_proto)
tagged_side_inputs = [
(tag, beam.pvalue.SideInputData.from_runner_api(si, factory.context))
for tag, si in side_inputs_proto.items()]
tagged_side_inputs.sort(key=lambda tag_si: int(tag_si[0][4:]))
side_input_maps = [
StateBackedSideInputMap(
factory.state_handler,
transform_id,
tag,
si,
input_tags_to_coders[tag])
for tag, si in tagged_side_inputs]
else:
side_input_maps = []
output_tags = list(transform_proto.outputs.keys())
# Hack to match out prefix injected by dataflow runner.
def mutate_tag(tag):
if 'None' in output_tags:
if tag == 'None':
return 'out'
else:
return 'out_' + tag
else:
return tag
dofn_data = pickler.loads(serialized_fn)
if not dofn_data[-1]:
# Windowing not set.
side_input_tags = side_inputs_proto or ()
pcoll_id, = [pcoll for tag, pcoll in transform_proto.inputs.items()
if tag not in side_input_tags]
windowing = factory.context.windowing_strategies.get_by_id(
factory.descriptor.pcollections[pcoll_id].windowing_strategy_id)
serialized_fn = pickler.dumps(dofn_data[:-1] + (windowing,))
output_coders = factory.get_output_coders(transform_proto)
spec = operation_specs.WorkerDoFn(
serialized_fn=serialized_fn,
output_tags=[mutate_tag(tag) for tag in output_tags],
input=None,
side_inputs=None, # Fn API uses proto definitions and the Fn State API
output_coders=[output_coders[tag] for tag in output_tags])
return factory.augment_oldstyle_op(
operations.DoOperation(
transform_proto.unique_name,
spec,
factory.counter_factory,
factory.state_sampler,
side_input_maps),
transform_proto.unique_name,
consumers,
output_tags)
def run_pipeline(self, pipeline):
"""Execute test pipeline and verify test matcher"""
options = pipeline._options.view_as(TestOptions)
on_success_matcher = options.on_success_matcher
wait_duration = options.wait_until_finish_duration
is_streaming = options.view_as(StandardOptions).streaming
# [BEAM-1889] Do not send this to remote workers also, there is no need to
# send this option to remote executors.
options.on_success_matcher = None
self.result = super(TestDataflowRunner, self).run_pipeline(pipeline)
if self.result.has_job:
# TODO(markflyhigh)(BEAM-1890): Use print since Nose dosen't show logs
# in some cases.
print('Found: %s.' % self.build_console_url(pipeline.options))
try:
self.wait_until_in_state(PipelineState.RUNNING)
if is_streaming and not wait_duration:
logging.warning('Waiting indefinitely for streaming job.')
self.result.wait_until_finish(duration=wait_duration)
if on_success_matcher:
from hamcrest import assert_that as hc_assert_that
hc_assert_that(self.result, pickler.loads(on_success_matcher))
finally:
if not self.result.is_in_terminal_state():
self.result.cancel()
self.wait_until_in_state(PipelineState.CANCELLED, timeout=300)
return self.result
def _get_concat_source(self):
if self._concat_source is None:
single_file_sources = []
file_names = [f for f in fileio.ChannelFactory.glob(self._pattern)]
sizes = FileBasedSource._estimate_sizes_of_files(file_names,
self._pattern)
# We create a reference for FileBasedSource that will be serialized along
# with each _SingleFileSource. To prevent this FileBasedSource from having
# a reference to ConcatSource (resulting in quadratic space complexity)
# we clone it here.
file_based_source_ref = pickler.loads(pickler.dumps(self))
for index, file_name in enumerate(file_names):
if sizes[index] == 0:
continue # Ignoring empty file.
# We determine splittability of this specific file.
splittable = self.splittable
if (splittable and
self._compression_type == fileio.CompressionTypes.AUTO):
compression_type = fileio.CompressionTypes.detect_compression_type(
file_name)
if compression_type != fileio.CompressionTypes.UNCOMPRESSED:
splittable = False
single_file_source = _SingleFileSource(
file_based_source_ref, file_name,
0,
sizes[index],
min_bundle_size=self._min_bundle_size,
splittable=splittable)
single_file_sources.append(single_file_source)
self._concat_source = concat_source.ConcatSource(single_file_sources)
return self._concat_source
def run(self, pipeline):
"""Execute test pipeline and verify test matcher"""
options = pipeline.options.view_as(TestOptions)
on_success_matcher = options.on_success_matcher
# [BEAM-1889] Do not send this to remote workers also, there is no need to
# send this option to remote executors.
options.on_success_matcher = None
self.result = super(TestDataflowRunner, self).run(pipeline)
if self.result.has_job:
project = pipeline.options.view_as(GoogleCloudOptions).project
job_id = self.result.job_id()
# TODO(markflyhigh)(BEAM-1890): Use print since Nose dosen't show logs
# in some cases.
print (
'Found: https://console.cloud.google.com/dataflow/job/%s?project=%s' %
(job_id, project))
self.result.wait_until_finish()
if on_success_matcher:
from hamcrest import assert_that as hc_assert_that
hc_assert_that(self.result, pickler.loads(on_success_matcher))
return self.result
def test_get_coder_with_composite_custom_coder(self):
typecoders.registry.register_coder(CustomClass, CustomCoder)
coder = typecoders.registry.get_coder(typehints.KV[CustomClass, str])
revived_coder = pickler.loads(pickler.dumps(coder))
self.assertEqual(
(CustomClass(123), 'abc'),
revived_coder.decode(revived_coder.encode((CustomClass(123), 'abc'))))
def start_bundle(self):
transform = self._applied_ptransform.transform
self._tagged_receivers = _TaggedReceivers(self._evaluation_context)
for output_tag in self._applied_ptransform.outputs:
output_pcollection = pvalue.PCollection(None, tag=output_tag)
output_pcollection.producer = self._applied_ptransform
self._tagged_receivers[output_tag] = (
self._evaluation_context.create_bundle(output_pcollection))
self._tagged_receivers[output_tag].tag = output_tag
self._counter_factory = counters.CounterFactory()
# TODO(aaltay): Consider storing the serialized form as an optimization.
dofn = (pickler.loads(pickler.dumps(transform.dofn))
if self._perform_dofn_pickle_test else transform.dofn)
args = transform.args if hasattr(transform, 'args') else []
kwargs = transform.kwargs if hasattr(transform, 'kwargs') else {}
self.runner = DoFnRunner(
dofn, args, kwargs,
self._side_inputs,
self._applied_ptransform.inputs[0].windowing,
tagged_receivers=self._tagged_receivers,
step_name=self._applied_ptransform.full_label,
state=DoFnState(self._counter_factory),
scoped_metrics_container=self.scoped_metrics_container)
self.runner.start()
def test_append_verifier_in_extra_opt(self):
extra_opt = {'matcher': SimpleMatcher()}
opt_list = TestPipeline().get_full_options_as_args(**extra_opt)
_, value = opt_list[0].split('=', 1)
matcher = pickler.loads(value)
self.assertTrue(isinstance(matcher, BaseMatcher))
hc_assert_that(None, matcher)
def _get_manifest_contents(self, manifest_file_handle):
manifest_file_handle.seek(0)
try:
return pickler.loads(manifest_file_handle.read())
except ValueError as e:
tf.compat.v1.logging.error('Can\'t load cache manifest contents: %s',
str(e))
return {}
def from_runner_api(proto, context):
# Producer and tag will be filled in later, the key point is that the
# same object is returned for the same pcollection id.
return PCollection(
None,
element_type=pickler.loads(proto.coder_id),
windowing=context.windowing_strategies.get_by_id(
proto.windowing_strategy_id))
def test_lambda_with_globals(self):
"""Tests that the globals of a function are preserved."""
# The point of the test is that the lambda being called after unpickling
# relies on having the re module being loaded.
self.assertEquals(
['abc', 'def'],
loads(dumps(module_test.get_lambda_with_globals()))('abc def'))
def from_runner_api(proto, context):
# Producer and tag will be filled in later, the key point is that the
# same object is returned for the same pcollection id.
return PCollection(
None,
element_type=pickler.loads(proto.coder_id),
windowing=context.windowing_strategies.get_by_id(
proto.windowing_strategy_id))
def test_lambda_with_globals(self):
"""Tests that the globals of a function are preserved."""
# The point of the test is that the lambda being called after unpickling
# relies on having the re module being loaded.
self.assertEquals(
['abc', 'def'],
loads(dumps(module_test.get_lambda_with_globals()))('abc def'))
def setup(self):
with self.scoped_start_state:
super(DoOperation, self).setup()
# See fn_data in dataflow_runner.py
fn, args, kwargs, tags_and_types, window_fn = (pickler.loads(
self.spec.serialized_fn))
state = common.DoFnState(self.counter_factory)
state.step_name = self.name_context.logging_name()
# Tag to output index map used to dispatch the side output values emitted
# by the DoFn function to the appropriate receivers. The main output is
# tagged with None and is associated with its corresponding index.
self.tagged_receivers = _TaggedReceivers(
self.counter_factory, self.name_context.logging_name())
output_tag_prefix = PropertyNames.OUT + '_'
for index, tag in enumerate(self.spec.output_tags):
if tag == PropertyNames.OUT:
original_tag = None
elif tag.startswith(output_tag_prefix):
original_tag = tag[len(output_tag_prefix):]
else:
raise ValueError(
'Unexpected output name for operation: %s' % tag)
self.tagged_receivers[original_tag] = self.receivers[index]
if self.user_state_context:
self.user_state_context.update_timer_receivers(
self.tagged_receivers)
self.timer_specs = {
spec.name: spec
for spec in userstate.get_dofn_specs(fn)[1]
}
if self.side_input_maps is None:
if tags_and_types:
self.side_input_maps = list(
self._read_side_inputs(tags_and_types))
else:
self.side_input_maps = []
self.dofn_runner = common.DoFnRunner(
fn,
args,
kwargs,
self.side_input_maps,
window_fn,
tagged_receivers=self.tagged_receivers,
step_name=self.name_context.logging_name(),
state=state,
user_state_context=self.user_state_context,
operation_name=self.name_context.metrics_name())
self.dofn_receiver = (self.dofn_runner if isinstance(
self.dofn_runner, Receiver) else DoFnRunnerReceiver(
self.dofn_runner))
def start_bundle(self):
transform = self._applied_ptransform.transform
self._tagged_receivers = _TaggedReceivers(self._evaluation_context)
if isinstance(self._applied_ptransform.parent.transform,
core._MultiParDo): # pylint: disable=protected-access
do_outputs_tuple = self._applied_ptransform.parent.outputs[0]
assert isinstance(do_outputs_tuple, pvalue.DoOutputsTuple)
main_output_pcollection = do_outputs_tuple[
do_outputs_tuple._main_tag] # pylint: disable=protected-access
for side_output_tag in transform.side_output_tags:
output_pcollection = do_outputs_tuple[side_output_tag]
self._tagged_receivers[side_output_tag] = (
self._evaluation_context.create_bundle(output_pcollection))
self._tagged_receivers[side_output_tag].tag = side_output_tag
else:
assert len(self._outputs) == 1
main_output_pcollection = list(self._outputs)[0]
self._tagged_receivers[None] = self._evaluation_context.create_bundle(
main_output_pcollection)
self._tagged_receivers[None].tag = None # main_tag is None.
self._counter_factory = counters.CounterFactory()
# TODO(aaltay): Consider storing the serialized form as an optimization.
dofn = pickler.loads(pickler.dumps(transform.dofn))
pipeline_options = self._evaluation_context.pipeline_options
if (pipeline_options is not None
and pipeline_options.view_as(TypeOptions).runtime_type_check):
# TODO(sourabhbajaj): Remove this if-else
if isinstance(dofn, core.NewDoFn):
dofn = TypeCheckWrapperNewDoFn(dofn,
transform.get_type_hints())
else:
dofn = TypeCheckWrapperDoFn(dofn, transform.get_type_hints())
# TODO(sourabhbajaj): Remove this if-else
if isinstance(dofn, core.NewDoFn):
dofn = OutputCheckWrapperNewDoFn(
dofn, self._applied_ptransform.full_label)
else:
dofn = OutputCheckWrapperDoFn(dofn,
self._applied_ptransform.full_label)
self.runner = DoFnRunner(
dofn,
transform.args,
transform.kwargs,
self._side_inputs,
self._applied_ptransform.inputs[0].windowing,
tagged_receivers=self._tagged_receivers,
step_name=self._applied_ptransform.full_label,
state=DoFnState(self._counter_factory),
scoped_metrics_container=self.scoped_metrics_container)
self.runner.start()
def __init__(self, name_context, spec, counter_factory, state_sampler):
super(CombineOperation, self).__init__(name_context, spec,
counter_factory, state_sampler)
# Combiners do not accept deferred side-inputs (the ignored fourth argument)
# and therefore the code to handle the extra args/kwargs is simpler than for
# the DoFn's of ParDo.
fn, args, kwargs = pickler.loads(self.spec.serialized_fn)[:3]
self.phased_combine_fn = (PhasedCombineFnExecutor(
self.spec.phase, fn, args, kwargs))
def _create_pardo_operation(factory,
transform_id,
transform_proto,
consumers,
serialized_fn,
side_inputs_proto=None):
if side_inputs_proto:
tagged_side_inputs = [
(tag,
beam.pvalue.SideInputData.from_runner_api(si, factory.context))
for tag, si in side_inputs_proto.items()
]
tagged_side_inputs.sort(key=lambda tag_si: int(tag_si[0][4:]))
side_input_maps = [
StateBackedSideInputMap(factory.state_handler, transform_id, tag,
si) for tag, si in tagged_side_inputs
]
else:
side_input_maps = []
output_tags = list(transform_proto.outputs.keys())
# Hack to match out prefix injected by dataflow runner.
def mutate_tag(tag):
if 'None' in output_tags:
if tag == 'None':
return 'out'
else:
return 'out_' + tag
else:
return tag
dofn_data = pickler.loads(serialized_fn)
if not dofn_data[-1]:
# Windowing not set.
side_input_tags = side_inputs_proto or ()
pcoll_id, = [
pcoll for tag, pcoll in transform_proto.inputs.items()
if tag not in side_input_tags
]
windowing = factory.context.windowing_strategies.get_by_id(
factory.descriptor.pcollections[pcoll_id].windowing_strategy_id)
serialized_fn = pickler.dumps(dofn_data[:-1] + (windowing, ))
output_coders = factory.get_output_coders(transform_proto)
spec = operation_specs.WorkerDoFn(
serialized_fn=serialized_fn,
output_tags=[mutate_tag(tag) for tag in output_tags],
input=None,
side_inputs=[], # Obsoleted by side_input_maps.
output_coders=[output_coders[tag] for tag in output_tags])
return factory.augment_oldstyle_op(
operations.DoOperation(transform_proto.unique_name, spec,
factory.counter_factory, factory.state_sampler,
side_input_maps), transform_proto.unique_name,
consumers, output_tags)
def __init__(self, operation_name, spec, counter_factory, state_sampler):
super(CombineOperation, self).__init__(
operation_name, spec, counter_factory, state_sampler)
# Combiners do not accept deferred side-inputs (the ignored fourth argument)
# and therefore the code to handle the extra args/kwargs is simpler than for
# the DoFn's of ParDo.
fn, args, kwargs = pickler.loads(self.spec.serialized_fn)[:3]
self.phased_combine_fn = (
PhasedCombineFnExecutor(self.spec.phase, fn, args, kwargs))
def register_pickle_urn(cls, pickle_urn):
"""Registers and implements the given urn via pickling.
"""
inspect.currentframe().f_back.f_locals['to_runner_api_parameter'] = (
lambda self, context:
(pickle_urn, wrappers_pb2.BytesValue(value=pickler.dumps(self))))
cls.register_urn(
pickle_urn, wrappers_pb2.BytesValue,
lambda proto, unused_context: pickler.loads(proto.value))
def create(factory, transform_id, transform_proto, parameter, consumers):
source = pickler.loads(parameter.value)
spec = operation_specs.WorkerRead(
iobase.SourceBundle(1.0, source, None, None),
[WindowedValueCoder(source.default_output_coder())])
return factory.augment_oldstyle_op(
operations.ReadOperation(transform_proto.unique_name, spec,
factory.counter_factory,
factory.state_sampler),
transform_proto.unique_name, consumers)
def create(factory, transform_id, transform_proto, parameter, consumers):
dofn_data = pickler.loads(parameter)
if len(dofn_data) == 2:
# Has side input data.
serialized_fn, side_input_data = dofn_data
else:
# No side input data.
serialized_fn, side_input_data = parameter, []
return _create_pardo_operation(factory, transform_id, transform_proto,
consumers, serialized_fn, side_input_data)
def register_pickle_urn(cls, pickle_urn):
"""Registers and implements the given urn via pickling.
"""
inspect.currentframe().f_back.f_locals['to_runner_api_parameter'] = (
lambda self, context: (
pickle_urn, wrappers_pb2.BytesValue(value=pickler.dumps(self))))
cls.register_urn(
pickle_urn,
wrappers_pb2.BytesValue,
lambda proto, unused_context: pickler.loads(proto.value))
def run_pipeline(self, pipeline):
docker_image = (
pipeline.options.view_as(PortableOptions).harness_docker_image
or self.default_docker_image())
job_endpoint = pipeline.options.view_as(PortableOptions).job_endpoint
if not job_endpoint:
raise ValueError(
'job_endpoint should be provided while creating runner.')
proto_context = pipeline_context.PipelineContext(
default_environment_url=docker_image)
proto_pipeline = pipeline.to_runner_api(context=proto_context)
if not self.is_embedded_fnapi_runner:
# Java has different expectations about coders
# (windowed in Fn API, but *un*windowed in runner API), whereas the
# embedded FnApiRunner treats them consistently, so we must guard this
# for now, until FnApiRunner is fixed.
# See also BEAM-2717.
for pcoll in proto_pipeline.components.pcollections.values():
if pcoll.coder_id not in proto_context.coders:
# This is not really a coder id, but a pickled coder.
coder = coders.registry.get_coder(
pickler.loads(pcoll.coder_id))
pcoll.coder_id = proto_context.coders.get_id(coder)
proto_context.coders.populate_map(proto_pipeline.components.coders)
# Some runners won't detect the GroupByKey transform unless it has no
# subtransforms. Remove all sub-transforms until BEAM-4605 is resolved.
for _, transform_proto in list(
proto_pipeline.components.transforms.items()):
if transform_proto.spec.urn == common_urns.primitives.GROUP_BY_KEY.urn:
for sub_transform in transform_proto.subtransforms:
del proto_pipeline.components.transforms[sub_transform]
del transform_proto.subtransforms[:]
job_service = beam_job_api_pb2_grpc.JobServiceStub(
grpc.insecure_channel(job_endpoint))
prepare_response = job_service.Prepare(
beam_job_api_pb2.PrepareJobRequest(job_name='job',
pipeline=proto_pipeline))
if prepare_response.artifact_staging_endpoint.url:
stager = portable_stager.PortableStager(
grpc.insecure_channel(
prepare_response.artifact_staging_endpoint.url),
prepare_response.staging_session_token)
retrieval_token, _ = stager.stage_job_resources(
pipeline._options, staging_location='')
else:
retrieval_token = None
run_response = job_service.Run(
beam_job_api_pb2.RunJobRequest(
preparation_id=prepare_response.preparation_id,
retrieval_token=retrieval_token))
return PipelineResult(job_service, run_response.job_id)
def create(factory, transform_id, transform_proto, parameter, consumers):
# The Dataflow runner harness strips the base64 encoding.
source = pickler.loads(base64.b64encode(parameter))
spec = operation_specs.WorkerRead(
iobase.SourceBundle(1.0, source, None, None),
[WindowedValueCoder(source.default_output_coder())])
return factory.augment_oldstyle_op(
operations.ReadOperation(transform_proto.unique_name, spec,
factory.counter_factory,
factory.state_sampler),
transform_proto.unique_name, consumers)
def start(self):
with self.scoped_start_state:
super(DoOperation, self).start()
# See fn_data in dataflow_runner.py
fn, args, kwargs, tags_and_types, window_fn = (pickler.loads(
self.spec.serialized_fn))
state = common.DoFnState(self.counter_factory)
state.step_name = self.step_name
# TODO(silviuc): What is the proper label here? PCollection being
# processed?
context = common.DoFnContext('label', state=state)
# Tag to output index map used to dispatch the side output values emitted
# by the DoFn function to the appropriate receivers. The main output is
# tagged with None and is associated with its corresponding index.
self.tagged_receivers = _TaggedReceivers(self.counter_factory,
self.step_name)
output_tag_prefix = PropertyNames.OUT + '_'
for index, tag in enumerate(self.spec.output_tags):
if tag == PropertyNames.OUT:
original_tag = None
elif tag.startswith(output_tag_prefix):
original_tag = tag[len(output_tag_prefix):]
else:
raise ValueError(
'Unexpected output name for operation: %s' % tag)
self.tagged_receivers[original_tag] = self.receivers[index]
if self.side_input_maps is None:
if tags_and_types:
self.side_input_maps = list(
self._read_side_inputs(tags_and_types))
else:
self.side_input_maps = []
self.dofn_runner = common.DoFnRunner(
fn,
args,
kwargs,
self.side_input_maps,
window_fn,
context,
self.tagged_receivers,
logger,
self.step_name,
scoped_metrics_container=self.scoped_metrics_container)
self.dofn_receiver = (self.dofn_runner if isinstance(
self.dofn_runner, Receiver) else DoFnRunnerReceiver(
self.dofn_runner))
self.dofn_runner.start()
def run(self, pipeline):
"""Execute test pipeline and verify test matcher"""
self.result = super(TestDataflowRunner, self).run(pipeline)
self.result.wait_until_finish()
options = pipeline.options.view_as(TestOptions)
if options.on_success_matcher:
from hamcrest import assert_that as hc_assert_that
hc_assert_that(self.result, pickler.loads(options.on_success_matcher))
return self.result
def _create_sdf_operation(proxy_dofn, factory, transform_id, transform_proto,
parameter, consumers):
dofn_data = pickler.loads(parameter.do_fn.spec.payload)
dofn = dofn_data[0]
restriction_provider = common.DoFnSignature(
dofn).get_restriction_provider()
serialized_fn = pickler.dumps((proxy_dofn(dofn, restriction_provider), ) +
dofn_data[1:])
return _create_pardo_operation(factory, transform_id, transform_proto,
consumers, serialized_fn, parameter)
def setup(self):
# type: () -> None
with self.scoped_start_state:
super(DoOperation, self).setup()
# See fn_data in dataflow_runner.py
fn, args, kwargs, tags_and_types, window_fn = (pickler.loads(
self.spec.serialized_fn))
state = common.DoFnState(self.counter_factory)
state.step_name = self.name_context.logging_name()
# Tag to output index map used to dispatch the output values emitted
# by the DoFn function to the appropriate receivers. The main output is
# either the only output or the output tagged with 'None' and is
# associated with its corresponding index.
self.tagged_receivers = _TaggedReceivers(
self.counter_factory, self.name_context.logging_name())
if len(self.spec.output_tags) == 1:
self.tagged_receivers[None] = self.receivers[0]
self.tagged_receivers[
self.spec.output_tags[0]] = self.receivers[0]
else:
for index, tag in enumerate(self.spec.output_tags):
self.tagged_receivers[tag] = self.receivers[index]
if tag == 'None':
self.tagged_receivers[None] = self.receivers[index]
if self.user_state_context:
self.timer_specs = {
spec.name: spec
for spec in userstate.get_dofn_specs(fn)[1]
}
if self.side_input_maps is None:
if tags_and_types:
self.side_input_maps = list(
self._read_side_inputs(tags_and_types))
else:
self.side_input_maps = []
self.dofn_runner = common.DoFnRunner(
fn,
args,
kwargs,
self.side_input_maps,
window_fn,
tagged_receivers=self.tagged_receivers,
step_name=self.name_context.logging_name(),
state=state,
user_state_context=self.user_state_context,
operation_name=self.name_context.metrics_name())
self.dofn_runner.setup()
def create(factory, transform_id, transform_proto, parameter, consumers):
dofn_data = pickler.loads(parameter)
if len(dofn_data) == 2:
# Has side input data.
serialized_fn, side_input_data = dofn_data
else:
# No side input data.
serialized_fn, side_input_data = parameter.value, []
return _create_pardo_operation(
factory, transform_id, transform_proto, consumers,
serialized_fn, side_input_data)
def create(factory, transform_id, transform_proto, parameter, consumers):
assert parameter.do_fn.spec.urn == urns.PICKLED_DO_FN_INFO
serialized_fn = parameter.do_fn.spec.payload
dofn_data = pickler.loads(serialized_fn)
if len(dofn_data) == 2:
# Has side input data.
serialized_fn, side_input_data = dofn_data
else:
# No side input data.
side_input_data = []
return _create_pardo_operation(factory, transform_id, transform_proto,
consumers, serialized_fn, side_input_data)
def _create_sdf_operation(
proxy_dofn,
factory, transform_id, transform_proto, parameter, consumers):
dofn_data = pickler.loads(parameter.do_fn.spec.payload)
dofn = dofn_data[0]
restriction_provider = common.DoFnSignature(dofn).get_restriction_provider()
serialized_fn = pickler.dumps(
(proxy_dofn(dofn, restriction_provider),) + dofn_data[1:])
return _create_pardo_operation(
factory, transform_id, transform_proto, consumers,
serialized_fn, parameter)
def create(factory, transform_id, transform_proto, mapping_fn_spec, consumers):
assert mapping_fn_spec.spec.urn == python_urns.PICKLED_WINDOW_MAPPING_FN
window_mapping_fn = pickler.loads(mapping_fn_spec.spec.payload)
class MapWindows(beam.DoFn):
def process(self, element):
key, window = element
return [(key, window_mapping_fn(window))]
return _create_simple_pardo_operation(factory, transform_id,
transform_proto, consumers,
MapWindows())
def start(self):
with self.scoped_start_state:
super(DoOperation, self).start()
# See fn_data in dataflow_runner.py
fn, args, kwargs, tags_and_types, window_fn = (
pickler.loads(self.spec.serialized_fn))
state = common.DoFnState(self.counter_factory)
state.step_name = self.name_context.logging_name()
# Tag to output index map used to dispatch the side output values emitted
# by the DoFn function to the appropriate receivers. The main output is
# tagged with None and is associated with its corresponding index.
self.tagged_receivers = _TaggedReceivers(
self.counter_factory, self.name_context.logging_name())
output_tag_prefix = PropertyNames.OUT + '_'
for index, tag in enumerate(self.spec.output_tags):
if tag == PropertyNames.OUT:
original_tag = None
elif tag.startswith(output_tag_prefix):
original_tag = tag[len(output_tag_prefix):]
else:
raise ValueError('Unexpected output name for operation: %s' % tag)
self.tagged_receivers[original_tag] = self.receivers[index]
if self.user_state_context:
self.user_state_context.update_timer_receivers(self.tagged_receivers)
self.timer_specs = {
spec.name: spec
for spec in userstate.get_dofn_specs(fn)[1]
}
if self.side_input_maps is None:
if tags_and_types:
self.side_input_maps = list(self._read_side_inputs(tags_and_types))
else:
self.side_input_maps = []
self.dofn_runner = common.DoFnRunner(
fn, args, kwargs, self.side_input_maps, window_fn,
tagged_receivers=self.tagged_receivers,
step_name=self.name_context.logging_name(),
state=state,
user_state_context=self.user_state_context,
operation_name=self.name_context.metrics_name())
self.dofn_receiver = (self.dofn_runner
if isinstance(self.dofn_runner, Receiver)
else DoFnRunnerReceiver(self.dofn_runner))
self.dofn_runner.start()
def create(factory, transform_id, transform_proto, mapping_fn_spec, consumers):
assert mapping_fn_spec.spec.urn == python_urns.PICKLED_WINDOW_MAPPING_FN
window_mapping_fn = pickler.loads(mapping_fn_spec.spec.payload)
class MapWindows(beam.DoFn):
def process(self, element):
key, window = element
return [(key, window_mapping_fn(window))]
return _create_simple_pardo_operation(
factory, transform_id, transform_proto, consumers,
MapWindows())
def test_create_uses_coder_for_pickling(self):
coders.registry.register_coder(_Unpicklable, _UnpicklableCoder)
create = Create([_Unpicklable(1), _Unpicklable(2), _Unpicklable(3)])
unpickled_create = pickler.loads(pickler.dumps(create))
self.assertEqual(
sorted(create.values, key=lambda v: v.value),
sorted(unpickled_create.values, key=lambda v: v.value))
with self.assertRaises(NotImplementedError):
# As there is no special coder for Union types, this will fall back to
# FastPrimitivesCoder, which in turn falls back to pickling.
create_mixed_types = Create([_Unpicklable(1), 2])
pickler.dumps(create_mixed_types)
def create(factory, transform_id, transform_proto, parameter, consumers):
assert parameter.do_fn.spec.urn == urns.PICKLED_DO_FN_INFO
serialized_fn = parameter.do_fn.spec.payload
dofn_data = pickler.loads(serialized_fn)
if len(dofn_data) == 2:
# Has side input data.
serialized_fn, side_input_data = dofn_data
else:
# No side input data.
side_input_data = []
return _create_pardo_operation(
factory, transform_id, transform_proto, consumers,
serialized_fn, side_input_data)
def create(factory, transform_id, transform_proto, parameter, consumers):
# The Dataflow runner harness strips the base64 encoding.
source = pickler.loads(base64.b64encode(parameter))
spec = operation_specs.WorkerRead(
iobase.SourceBundle(1.0, source, None, None),
[WindowedValueCoder(source.default_output_coder())])
return factory.augment_oldstyle_op(
operations.ReadOperation(
transform_proto.unique_name,
spec,
factory.counter_factory,
factory.state_sampler),
transform_proto.unique_name,
consumers)
def start_bundle(self):
transform = self._applied_ptransform.transform
self._tagged_receivers = _TaggedReceivers(self._evaluation_context)
for output_tag in self._applied_ptransform.outputs:
output_pcollection = pvalue.PCollection(None, tag=output_tag)
output_pcollection.producer = self._applied_ptransform
self._tagged_receivers[output_tag] = (
self._evaluation_context.create_bundle(output_pcollection))
self._tagged_receivers[output_tag].tag = output_tag
self._counter_factory = counters.CounterFactory()
# TODO(aaltay): Consider storing the serialized form as an optimization.
dofn = (
pickler.loads(pickler.dumps(transform.dofn))
if self._perform_dofn_pickle_test else transform.dofn)
args = transform.args if hasattr(transform, 'args') else []
kwargs = transform.kwargs if hasattr(transform, 'kwargs') else {}
self.user_state_context = None
self.user_timer_map = {}
if is_stateful_dofn(dofn):
kv_type_hint = self._applied_ptransform.inputs[0].element_type
if kv_type_hint and kv_type_hint != Any:
coder = coders.registry.get_coder(kv_type_hint)
self.key_coder = coder.key_coder()
else:
self.key_coder = coders.registry.get_coder(Any)
self.user_state_context = DirectUserStateContext(
self._step_context, dofn, self.key_coder)
_, all_timer_specs = get_dofn_specs(dofn)
for timer_spec in all_timer_specs:
self.user_timer_map['user/%s' % timer_spec.name] = timer_spec
self.runner = DoFnRunner(
dofn,
args,
kwargs,
self._side_inputs,
self._applied_ptransform.inputs[0].windowing,
tagged_receivers=self._tagged_receivers,
step_name=self._applied_ptransform.full_label,
state=DoFnState(self._counter_factory),
user_state_context=self.user_state_context)
self.runner.setup()
self.runner.start()
def run_pipeline(self, pipeline):
# Java has different expectations about coders
# (windowed in Fn API, but *un*windowed in runner API), whereas the
# FnApiRunner treats them consistently, so we must guard this.
# See also BEAM-2717.
proto_context = pipeline_context.PipelineContext(
default_environment_url=self._docker_image)
proto_pipeline = pipeline.to_runner_api(context=proto_context)
if self._runner_api_address:
for pcoll in proto_pipeline.components.pcollections.values():
if pcoll.coder_id not in proto_context.coders:
coder = coders.registry.get_coder(
pickler.loads(pcoll.coder_id))
pcoll.coder_id = proto_context.coders.get_id(coder)
proto_context.coders.populate_map(proto_pipeline.components.coders)
# Some runners won't detect the GroupByKey transform unless it has no
# subtransforms. Remove all sub-transforms until BEAM-4605 is resolved.
for _, transform_proto in list(
proto_pipeline.components.transforms.items()):
if transform_proto.spec.urn == common_urns.primitives.GROUP_BY_KEY.urn:
for sub_transform in transform_proto.subtransforms:
del proto_pipeline.components.transforms[sub_transform]
del transform_proto.subtransforms[:]
job_service = self._create_job_service()
prepare_response = job_service.Prepare(
beam_job_api_pb2.PrepareJobRequest(job_name='job',
pipeline=proto_pipeline))
if prepare_response.artifact_staging_endpoint.url:
# Must commit something to get a retrieval token,
# committing empty manifest for now.
# TODO(BEAM-3883): Actually stage required files.
artifact_service = beam_artifact_api_pb2_grpc.ArtifactStagingServiceStub(
grpc.insecure_channel(
prepare_response.artifact_staging_endpoint.url))
commit_manifest = artifact_service.CommitManifest(
beam_artifact_api_pb2.CommitManifestRequest(
manifest=beam_artifact_api_pb2.Manifest(),
staging_session_token=prepare_response.
staging_session_token))
retrieval_token = commit_manifest.retrieval_token
else:
retrieval_token = None
run_response = job_service.Run(
beam_job_api_pb2.RunJobRequest(
preparation_id=prepare_response.preparation_id,
retrieval_token=retrieval_token))
return PipelineResult(job_service, run_response.job_id)
def _create_pardo_operation(
factory, transform_id, transform_proto, consumers,
serialized_fn, side_input_data):
def create_side_input(tag, coder):
# TODO(robertwb): Extract windows (and keys) out of element data.
# TODO(robertwb): Extract state key from ParDoPayload.
return operation_specs.WorkerSideInputSource(
tag=tag,
source=SideInputSource(
factory.state_handler,
beam_fn_api_pb2.StateKey.MultimapSideInput(
key=side_input_tag(transform_id, tag)),
coder=coder))
output_tags = list(transform_proto.outputs.keys())
# Hack to match out prefix injected by dataflow runner.
def mutate_tag(tag):
if 'None' in output_tags:
if tag == 'None':
return 'out'
else:
return 'out_' + tag
else:
return tag
dofn_data = pickler.loads(serialized_fn)
if not dofn_data[-1]:
# Windowing not set.
pcoll_id, = transform_proto.inputs.values()
windowing = factory.context.windowing_strategies.get_by_id(
factory.descriptor.pcollections[pcoll_id].windowing_strategy_id)
serialized_fn = pickler.dumps(dofn_data[:-1] + (windowing,))
output_coders = factory.get_output_coders(transform_proto)
spec = operation_specs.WorkerDoFn(
serialized_fn=serialized_fn,
output_tags=[mutate_tag(tag) for tag in output_tags],
input=None,
side_inputs=[
create_side_input(tag, coder) for tag, coder in side_input_data],
output_coders=[output_coders[tag] for tag in output_tags])
return factory.augment_oldstyle_op(
operations.DoOperation(
transform_proto.unique_name,
spec,
factory.counter_factory,
factory.state_sampler),
transform_proto.unique_name,
consumers,
output_tags)
def _create_pardo_operation(
factory, transform_id, transform_proto, consumers,
serialized_fn, side_input_data):
def create_side_input(tag, coder):
# TODO(robertwb): Extract windows (and keys) out of element data.
# TODO(robertwb): Extract state key from ParDoPayload.
return operation_specs.WorkerSideInputSource(
tag=tag,
source=SideInputSource(
factory.state_handler,
beam_fn_api_pb2.StateKey.MultimapSideInput(
key=side_input_tag(transform_id, tag)),
coder=coder))
output_tags = list(transform_proto.outputs.keys())
# Hack to match out prefix injected by dataflow runner.
def mutate_tag(tag):
if 'None' in output_tags:
if tag == 'None':
return 'out'
else:
return 'out_' + tag
else:
return tag
dofn_data = pickler.loads(serialized_fn)
if not dofn_data[-1]:
# Windowing not set.
pcoll_id, = transform_proto.inputs.values()
windowing = factory.context.windowing_strategies.get_by_id(
factory.descriptor.pcollections[pcoll_id].windowing_strategy_id)
serialized_fn = pickler.dumps(dofn_data[:-1] + (windowing,))
output_coders = factory.get_output_coders(transform_proto)
spec = operation_specs.WorkerDoFn(
serialized_fn=serialized_fn,
output_tags=[mutate_tag(tag) for tag in output_tags],
input=None,
side_inputs=[
create_side_input(tag, coder) for tag, coder in side_input_data],
output_coders=[output_coders[tag] for tag in output_tags])
return factory.augment_oldstyle_op(
operations.DoOperation(
transform_proto.unique_name,
spec,
factory.counter_factory,
factory.state_sampler),
transform_proto.unique_name,
consumers,
output_tags)
def start(self):
with self.scoped_start_state:
super(DoOperation, self).start()
# See fn_data in dataflow_runner.py
fn, args, kwargs, tags_and_types, window_fn = (
pickler.loads(self.spec.serialized_fn))
state = common.DoFnState(self.counter_factory)
state.step_name = self.step_name
# TODO(silviuc): What is the proper label here? PCollection being
# processed?
context = common.DoFnContext('label', state=state)
# Tag to output index map used to dispatch the side output values emitted
# by the DoFn function to the appropriate receivers. The main output is
# tagged with None and is associated with its corresponding index.
self.tagged_receivers = _TaggedReceivers(
self.counter_factory, self.step_name)
output_tag_prefix = PropertyNames.OUT + '_'
for index, tag in enumerate(self.spec.output_tags):
if tag == PropertyNames.OUT:
original_tag = None
elif tag.startswith(output_tag_prefix):
original_tag = tag[len(output_tag_prefix):]
else:
raise ValueError('Unexpected output name for operation: %s' % tag)
self.tagged_receivers[original_tag] = self.receivers[index]
if self.side_input_maps is None:
if tags_and_types:
self.side_input_maps = list(self._read_side_inputs(tags_and_types))
else:
self.side_input_maps = []
self.dofn_runner = common.DoFnRunner(
fn, args, kwargs, self.side_input_maps,
window_fn, context, self.tagged_receivers,
logger, self.step_name,
scoped_metrics_container=self.scoped_metrics_container)
self.dofn_receiver = (self.dofn_runner
if isinstance(self.dofn_runner, Receiver)
else DoFnRunnerReceiver(self.dofn_runner))
self.dofn_runner.start()
def run(self, pipeline):
"""Execute test pipeline and verify test matcher"""
options = pipeline.options.view_as(TestOptions)
on_success_matcher = options.on_success_matcher
# [BEAM-1889] Do not send this to remote workers also, there is no need to
# send this option to remote executors.
options.on_success_matcher = None
self.result = super(TestDataflowRunner, self).run(pipeline)
self.result.wait_until_finish()
if on_success_matcher:
from hamcrest import assert_that as hc_assert_that
hc_assert_that(self.result, pickler.loads(on_success_matcher))
return self.result
def __init__(self,
name_context,
spec,
counter_factory,
state_sampler,
windowing=None):
super(PGBKCVOperation, self).__init__(name_context, spec,
counter_factory, state_sampler)
# Combiners do not accept deferred side-inputs (the ignored fourth
# argument) and therefore the code to handle the extra args/kwargs is
# simpler than for the DoFn's of ParDo.
fn, args, kwargs = pickler.loads(self.spec.combine_fn)[:3]
self.combine_fn = curry_combine_fn(fn, args, kwargs)
self.combine_fn_add_input = self.combine_fn.add_input
base_compact = (core.CombineFn.compact if sys.version_info >=
(3, ) else core.CombineFn.compact.__func__)
if self.combine_fn.compact.__func__ is base_compact:
self.combine_fn_compact = None
else:
self.combine_fn_compact = self.combine_fn.compact
if windowing:
self.is_default_windowing = windowing.is_default()
tsc_type = windowing.timestamp_combiner
self.timestamp_combiner = (
None if tsc_type == window.TimestampCombiner.OUTPUT_AT_EOW else
window.TimestampCombiner.get_impl(tsc_type,
windowing.windowfn))
else:
self.is_default_windowing = False # unknown
self.timestamp_combiner = None
# Optimization for the (known tiny accumulator, often wide keyspace)
# combine functions.
# TODO(b/36567833): Bound by in-memory size rather than key count.
self.max_keys = (
1000 * 1000 if
isinstance(fn,
(combiners.CountCombineFn, combiners.MeanCombineFn)) or
# TODO(b/36597732): Replace this 'or' part by adding the 'cy' optimized
# combiners to the short list above.
(isinstance(fn, core.CallableWrapperCombineFn)
and fn._fn in (min, max, sum)) else 100 * 1000) # pylint: disable=protected-access
self.key_count = 0
self.table = {}
def split(self, desired_bundle_size, start_offset=None, stop_offset=None):
if start_offset is None:
start_offset = self._start_offset
if stop_offset is None:
stop_offset = self._stop_offset
if self._splittable:
bundle_size = max(desired_bundle_size, self._min_bundle_size)
bundle_start = start_offset
while bundle_start < stop_offset:
bundle_stop = min(bundle_start + bundle_size, stop_offset)
yield iobase.SourceBundle(
bundle_stop - bundle_start,
_SingleFileSource(
# Copying this so that each sub-source gets a fresh instance.
pickler.loads(pickler.dumps(self._file_based_source)),
self._file_name,
bundle_start,
bundle_stop,
min_bundle_size=self._min_bundle_size,
splittable=self._splittable),
bundle_start,
bundle_stop)
bundle_start = bundle_stop
else:
# Returning a single sub-source with end offset set to OFFSET_INFINITY (so
# that all data of the source gets read) since this source is
# unsplittable. Choosing size of the file as end offset will be wrong for
# certain unsplittable source, e.g., compressed sources.
yield iobase.SourceBundle(
stop_offset - start_offset,
_SingleFileSource(
self._file_based_source,
self._file_name,
start_offset,
range_trackers.OffsetRangeTracker.OFFSET_INFINITY,
min_bundle_size=self._min_bundle_size,
splittable=self._splittable
),
start_offset,
range_trackers.OffsetRangeTracker.OFFSET_INFINITY
)
def _get_concat_source(self):
if self._concat_source is None:
pattern = self._pattern.get()
single_file_sources = []
if self._file_system is None:
self._file_system = get_filesystem(pattern)
match_result = self._file_system.match([pattern])[0]
files_metadata = match_result.metadata_list
# We create a reference for FileBasedSource that will be serialized along
# with each _SingleFileSource. To prevent this FileBasedSource from having
# a reference to ConcatSource (resulting in quadratic space complexity)
# we clone it here.
file_based_source_ref = pickler.loads(pickler.dumps(self))
for file_metadata in files_metadata:
file_name = file_metadata.path
file_size = file_metadata.size_in_bytes
if file_size == 0:
continue # Ignoring empty file.
# We determine splittability of this specific file.
splittable = self.splittable
if (splittable
and self._compression_type == CompressionTypes.AUTO):
compression_type = CompressionTypes.detect_compression_type(
file_name)
if compression_type != CompressionTypes.UNCOMPRESSED:
splittable = False
single_file_source = _SingleFileSource(
file_based_source_ref,
file_name,
0,
file_size,
min_bundle_size=self._min_bundle_size,
splittable=splittable)
single_file_sources.append(single_file_source)
self._concat_source = concat_source.ConcatSource(
single_file_sources)
return self._concat_source
def expand(self, pvalue):
cache_dict = {}
for dataset_key in self._dataset_keys:
dataset_cache_path = os.path.join(self._cache_base_dir,
_make_dataset_key(dataset_key))
if not tf.io.gfile.isdir(dataset_cache_path):
continue
cache_dict[dataset_key] = {}
with tf.io.gfile.GFile(
os.path.join(dataset_cache_path, _MANIFEST_FILE_NAME), 'r') as f:
manifest = pickler.loads(f.read())
for key, value in six.iteritems(manifest):
cache_dict[dataset_key][key] = (
pvalue.pipeline
| 'ReadCache[{}][{}]'.format(dataset_key, value) >>
self._source('{}{}'.format(
os.path.join(dataset_cache_path, str(value)), '-*-of-*')))
return cache_dict
def check_coder(self, coder, *values, **kwargs):
context = kwargs.pop('context', pipeline_context.PipelineContext())
test_size_estimation = kwargs.pop('test_size_estimation', True)
assert not kwargs
self._observe(coder)
for v in values:
self.assertEqual(v, coder.decode(coder.encode(v)))
if test_size_estimation:
self.assertEqual(coder.estimate_size(v),
len(coder.encode(v)))
self.assertEqual(coder.estimate_size(v),
coder.get_impl().estimate_size(v))
self.assertEqual(coder.get_impl().get_estimated_size_and_observables(v),
(coder.get_impl().estimate_size(v), []))
copy1 = pickler.loads(pickler.dumps(coder))
copy2 = coders.Coder.from_runner_api(coder.to_runner_api(context), context)
for v in values:
self.assertEqual(v, copy1.decode(copy2.encode(v)))
if coder.is_deterministic():
self.assertEqual(copy1.encode(v), copy2.encode(v))
def validate_test_matcher(self, view, arg_name):
"""Validates that on_success_matcher argument if set.
Validates that on_success_matcher is unpicklable and is instance
of `hamcrest.core.base_matcher.BaseMatcher`.
"""
# This is a test only method and requires hamcrest
from hamcrest.core.base_matcher import BaseMatcher
pickled_matcher = view.on_success_matcher
errors = []
try:
matcher = pickler.loads(pickled_matcher)
if not isinstance(matcher, BaseMatcher):
errors.extend(
self._validate_error(self.ERR_INVALID_TEST_MATCHER_TYPE,
matcher, arg_name))
except: # pylint: disable=bare-except
errors.extend(
self._validate_error(self.ERR_INVALID_TEST_MATCHER_UNPICKLABLE,
pickled_matcher, arg_name))
return errors
def __init__(self, name_context, spec, counter_factory, state_sampler):
super(PGBKCVOperation, self).__init__(
name_context, spec, counter_factory, state_sampler)
# Combiners do not accept deferred side-inputs (the ignored fourth
# argument) and therefore the code to handle the extra args/kwargs is
# simpler than for the DoFn's of ParDo.
fn, args, kwargs = pickler.loads(self.spec.combine_fn)[:3]
self.combine_fn = curry_combine_fn(fn, args, kwargs)
self.combine_fn_add_input = self.combine_fn.add_input
# Optimization for the (known tiny accumulator, often wide keyspace)
# combine functions.
# TODO(b/36567833): Bound by in-memory size rather than key count.
self.max_keys = (
1000 * 1000 if
isinstance(fn, (combiners.CountCombineFn, combiners.MeanCombineFn)) or
# TODO(b/36597732): Replace this 'or' part by adding the 'cy' optimized
# combiners to the short list above.
(isinstance(fn, core.CallableWrapperCombineFn) and
fn._fn in (min, max, sum)) else 100 * 1000) # pylint: disable=protected-access
self.key_count = 0
self.table = {}