Ejemplo n.º 1
0
 def on_get(self, request, resp, **kwargs):
     """
     respond with Python module representation of the current config
     """
     session_user = auth.get_user_id(request)
     with warehouse.get_source_model_session() as dwsupport_model:
         if not management_auth.is_management_permitted(
                 session_user, dwsupport_model):
             msg = 'Warehouse management not authorized'
             raise falcon.HTTPUnauthorized(title='401', description=msg)
         #else
         requested_format = kwargs['format'].lower()
         if requested_format not in formats:
             msg = 'Dump format not found. Leave blank for Python (py) or include a supported format in dump URL: {}'.format(
                 formats)
             raise falcon.HTTPNotFound(title='404', description=msg)
         #else
         if requested_format == 'py':
             conf_module_text = DWSUPPORT_CONFIG_HEADER
             conf_module_text += 'model = {}'.format(get_model_string())
             conf_module_text += '\n'
             resp.body = conf_module_text
             return
         if requested_format == 'json':
             resp.body = json.dumps({'model': dwsupport_model})
             return
Ejemplo n.º 2
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    def on_get(self, request, response, **kwargs):
        """
        Falcon resource method for handling the HTTP request GET method

        Falcon API provides: parameters embedded in URL via a keyword
        args dict, as well as convenience class variables falcon.HTTP_*
        """
        with warehouse.get_source_model_session() as current_model:
            #get Source dataset object, referenced in URL path
            sources = source.SourceUtil.get_list_of_data_sources(
                request.url, auth.get_user_id(request), current_model)
            dataset_id = source_parameters.get_requested_dataset_id(
                sources, request, response, kwargs)
            if warehouse.is_warehouse(dataset_id):
                msg = 'Metadata.xml not available for source ID: ' + dataset_id
                raise falcon.HTTPInvalidParam(msg, 'source')
            dataset = None
            for table in current_model['tables']:
                table_id = '{}.{}'.format(table['project'], table['name'])
                if table_id == dataset_id:
                    dataset = table
                    break
            iso_xml = geographic_metadata(dataset, current_model)
            #return generated XML
            response.content_type = 'text/xml'
            response.body = iso_xml
Ejemplo n.º 3
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    def on_get(self, request, resp, **kwargs):
        """
        Falcon resource method, for handling HTTP request GET method

        Falcon request provides: parameters embedded in URL via a keyword args
        dict, as well as convenience class variables falcon.HTTP_*
        """
        api_config = loader.get_api_config()
        request_url = ResourceUtil.get_request_url(request, api_config)

        with warehouse.get_source_model_session() as model:
            sources = source.SourceUtil.get_list_of_data_sources(
                request_url, auth.get_user_id(request), model)
            str_dataset_id = source_parameters.get_requested_dataset_id(
                sources, request, resp, kwargs)
            dict_variables = ResourceUtil.get_self_dict(request_url)
            try:
                dwsupport_variables = get_list_of_variables(str_dataset_id)
            except NotImplementedError as e:
                #error; not a warehouse request & Dataset does not match requested ID
                logging.exception(e)
                raise falcon.HTTPError(falcon.HTTP_NOT_IMPLEMENTED,
                                       'Not Implemented', str(e))
            # format the DWSupport info, for publishing
            tables, associations = model['tables'], model['associations']
            list_variables = [
                to_web_variable(v, tables, associations)
                for v in dwsupport_variables
            ]
            # alphabatize the fields
            list_variables.sort(key=lambda v: v['id'])
            dict_variables[str_route] = list_variables
            str_nesting_indent_char = '\t'
            resp.body = json.dumps(dict_variables,
                                   indent=str_nesting_indent_char)
Ejemplo n.º 4
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 def on_get(self, request, resp):
     """
     return JSON object, representing the current session's user info
     """
     user_id = auth.get_user_id(request)
     # return JSON user representation
     user = get_user(user_id)
     json_user = json.dumps(user)
     resp.body = json_user
Ejemplo n.º 5
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 def on_get(self, request, resp, **kwargs):
     """
     return JSON representing referenced table's associated columns
     """
     session_user = auth.get_user_id(request)
     with warehouse.get_source_model_session() as dwsupport_model:
         if not management_auth.is_management_permitted(
                 session_user, dwsupport_model):
             msg = 'Warehouse management not authorized'
             raise falcon.HTTPUnauthorized(title='401', description=msg)
         #else
         sources = source.SourceUtil.get_list_of_data_sources(
             request.url, auth.get_user_id(request), dwsupport_model)
         requested_source_id = selection.get_requested_dataset_id(
             sources, request, resp, kwargs)
         rows_for_management_app = get_variable_identifier_queries_dicts(
             requested_source_id, dwsupport_model)
         resp.body = json.dumps({'variables': rows_for_management_app},
                                indent='\t')
         return
Ejemplo n.º 6
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    def on_get(self, request, resp, **kwargs):
        """
        direct user to POST the login details
        """
        session_user = auth.get_user_id(request)
        with warehouse.get_source_model_session() as dwsupport_model:
            if not management_auth.is_management_permitted(session_user, dwsupport_model):
                msg = 'Warehouse management not authorized'
                raise falcon.HTTPUnauthorized(title='401', description=msg)

        allowed = self.allowed_methods
        msg = "GET method not allowed, Please POST new table parameters to 'copy'"
        raise falcon.HTTPMethodNotAllowed(allowed, description = msg)
Ejemplo n.º 7
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    def on_get(self, request, resp):
        """
        Falcon resource method, for HTTP request method: GET

        Falcon request provides a request.url convenience instance variable
        """
        api_config = api.config_loader.get_api_config()
        request_url = SourceUtil.get_request_url(request, api_config)

        with warehouse.get_source_model_session() as model:
            sources = SourceUtil.get_list_of_data_sources(
                request_url, auth.get_user_id(request), model)
            # Build a dict, representing the Source RESTful entity/endpoint
            dictSource = SourceUtil.get_source(sources, request_url)
            str_nesting_indent_char = '\t'
            resp.body = json.dumps(dictSource, indent=str_nesting_indent_char)
Ejemplo n.º 8
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    def on_post(self, request, resp, **kwargs):
        """
        Create/update table column, associated with referenced source_id

        TODO: add a JSON response body,compatible with DataTables Editor
        TODO2: improve documentation, unit test coverage
        """
        session_user = auth.get_user_id(request)
        with warehouse.get_source_model_session() as dwsupport_model:
            if not management_auth.is_management_permitted(
                    session_user, dwsupport_model):
                msg = 'Warehouse management not authorized'
                raise falcon.HTTPUnauthorized(title='401', description=msg)
            #else
            sources = source.SourceUtil.get_list_of_data_sources(
                request.url, auth.get_user_id(request), dwsupport_model)
            requested_source_id = selection.get_requested_dataset_id(
                sources, request, resp, kwargs)
            source_project, source_table = requested_source_id.split(
                '.')  #TODO: refactor this
            # Add DTO variable (if needed)
            get_func = util.get_dwsupport_connection
            if request.params['action'] == 'create':
                table_name = request.params['data[0][table]']
                column_name = request.params['data[0][column]']
                python_type = request.params['data[0][python_type]']
                column_title = request.params['data[0][title]']
                variable_dto = {
                    'table': table_name,
                    'column': column_name,
                    'title': column_title,
                    'python_type': python_type,
                    'physical_type': None,
                    'units': None,
                    'max_length': None,
                    'precision': None,
                    'allowed_values': None,
                    'description': None
                }
                dto.variable.save([variable_dto], connection_func=get_func)
            # get new default Queries this column should be in
            ## DataTables editor returns URLEncoded table,column defaults
            ## in format: data[{table_name}.{column_name}][defaults] = '{query1}(,{queryN})'
            key_prefix = 'data['
            key_suffix = '][column]'
            column_key_generator = (key for key in request.params
                                    if key.endswith(key_suffix))
            column_key = next(column_key_generator)
            # get column details
            table_dot_column_plus_suffix = column_key[len(key_prefix):]
            table_dot_column = table_dot_column_plus_suffix[:len(key_suffix) *
                                                            -1]
            table_name, column_name = table_dot_column.split('.')
            # get query details
            defaults_key = 'data[{}.{}][defaults]'.format(
                table_name, column_name)
            try:
                defaults_text = request.params[defaults_key]
                default_queries = {
                    query.strip().lower()  #parse text
                    for query in defaults_text.split(',')
                }
            except KeyError as defaults_empty_or_missing:
                default_queries = set()
            query_variable_table = table_name
            # get table_name for a role
            association_key = 'data[{}.{}][association]'.format(
                table_name, column_name)
            try:
                association_column = request.params[association_key]
                association_dto = next(
                    (association
                     for association in dwsupport_model['associations']
                     if association['table'] == source_table
                     and association['column'] == association_column))
                query_variable_table = association_dto['parent']
            except KeyError as association_empty_or_missing:
                pass  # done. no able association is specified
            # update DTOs
            changes = dict()  #track changes
            changes['add'] = list()
            changes['update'] = list()
            for query_name in default_queries:
                try:
                    # add column
                    query_dto = next((query
                                      for query in dwsupport_model['queries']
                                      if query['name'] == query_name
                                      and query['table'] == source_table))
                    try:
                        query_dto['variables'][table_name].append(column_name)
                    except KeyError as new_table:
                        query_dto['variables'][table_name] = [column_name]
                    dto.query.update_by_table_and_name(
                        source_table,
                        query_name,
                        query_dto,
                        connection_func=get_func)
                    changes['update'].append(query_dto)
                except StopIteration as no_query_exists:
                    query_dto = {
                        'name': query_name,
                        'table': source_table,
                        'variables': {
                            table_name: [column_name]
                        }
                    }
                    dto.query.save([query_dto], connection_func=get_func)
                    changes['add'].append(query_dto)
            if default_queries == set():
                # remove column
                for query_dto in (query for query in dwsupport_model['queries']
                                  if query['table'] == source_table):
                    variable_tables = query_dto['variables'].keys()
                    if (query_variable_table in variable_tables and column_name
                            in query_dto['variables'][query_variable_table]):
                        query_dto['variables'][query_variable_table].remove(
                            column_name)
                        if len(query_dto['variables']
                               [query_variable_table]) == 0:
                            del (query_dto['variables'][query_variable_table])
                        dto.query.update_by_table_and_name(
                            source_table,
                            query_dto['name'],
                            query_dto,
                            connection_func=get_func)
                        changes['update'].append(query_dto)
            # JSON response per https://editor.datatables.net/manual/server
            msg = None
            if len(changes) == 0:
                msg = "No changes made"
            resp.body = json.dumps({'data': [changes], "error": msg})
            return
Ejemplo n.º 9
0
    def on_get(self, request, resp, **kwargs):
        """
        Falcon resource method, for handling HTTP request GET method

        Falcon request provides: parameters embedded in URL via a keyword args
        dict, as well as convenience class variables falcon.HTTP_*

        FIXME: remove moduel pylint:disable= & refactor this overlong code block!
        """
        # obtain logged in API user ID (if available)
        api_session_user = auth.get_user_id(request)
        # select data
        with warehouse.get_source_model_session() as dwsupport_model:
            sources = source.SourceUtil.get_list_of_data_sources(
                 request.url
                ,auth.get_user_id(request)
                ,dwsupport_model)
            str_dataset_id = get_requested_dataset_id( sources, request, resp, kwargs)
            list_variables_requested_source = variables.get_list_of_variables( str_dataset_id)
            # convert 'datasets' into a list of variables
            list_requested_datasets = parameters.get_requested_datasets( request)
            list_variables_from_datasets = []
            for str_id in list_requested_datasets:
                if str_dataset_id == str_id:
                    list_variables_from_datasets = list_variables_requested_source
                    break
                if str_dataset_id == 'warehouse': #FIXME: refactor this into a source.warehouse function
                    #obtain the 'warehouse' field aliases for each dataset
                    list_source_variables = variables.get_list_of_variables( str_id)
                    for var in list_source_variables:
                        warehouse_utils = api.resources.source.warehouse.warehouse
                        str_alias = warehouse_utils.prefix_field_name( var, str_id)
                        list_variables_from_datasets.append( str_alias)
                else: #error; not a warehouse request & Dataset does not match requested ID
                    raise falcon.HTTPNotFound(description= "Unrecognized dataset: "
                                           + str_id)
            list_requested_variables = parameters.get_requested_variables( request)

            # add default variables
            if len(list_requested_variables) < 1:
                requested_default_query = parameters.get_list_requested_parameter(
                    defaults.PARAMETER_NAME, request)
                try:
                    default_variables = defaults.get_default_variables(
                         requested_default_query
                        ,str_dataset_id
                        ,dwsupport_model)
                except defaults.UndefinedDefaultQuery as error:
                    msg = ("Value {} is not defined for dataset: '{}'"
                           .format(error, str_dataset_id))
                    raise falcon.HTTPInvalidParam(msg, defaults.PARAMETER_NAME)
                except defaults.AmbiguousDefaultQuery as error:
                    msg = "More than one value was specified: {}".format(error)
                    raise falcon.HTTPInvalidParam(msg, defaults.PARAMETER_NAME)
                except defaults.AmbiguousQueryHierarchy as error:
                    raise falcon.HTTPBadRequest( #TODO: add functional test coverage
                        title="Missing Parameter"
                        ,description=(
                           "Selection defaults not clear for"
                           " data source: '{}'."
                           " Selection must specify one or more 'variables='"
                           " selection parameters (or a 'defaults=' parameter"
                           " value from the following list: {})"
                           ).format(str_dataset_id, error)
                    )
                list_requested_variables.extend(default_variables)

            # add variables derived from 'datasets' param
            list_requested_variables.extend( list_variables_from_datasets)
            list_requested_filters = parameters.get_requested_filters( request)
            # process pivot columns parameter
            try:
                pivot_column_variables = parameters.get_requested_pivot_columns(
                    request
                    ,str_dataset_id
                    ,dwsupport_model['tables'])
            except parameters.PivotVariableError as err:
                raise falcon.HTTPInvalidParam(
                    msg=str(err)
                    ,param_name=parameters.ReservedParameterNames.pivot_columns
                ) from err
            # process 'Empty_cells' parameter
            try:
                empty_cell_dimensions = parameters.get_requested_empty_cells(
                    request
                    ,str_dataset_id
                    ,dwsupport_model['tables']
                    ,dwsupport_model['associations']
                )
            except (parameters.EmptyCellsSourceError
                    ,parameters.EmptyCellsDimensionError) as err:
                raise falcon.HTTPInvalidParam(
                    msg=str(err)
                    ,param_name=parameters.ReservedParameterNames.empty_cells
                ) from err
            # retrieve data
            start_time = datetime.now(pytz.timezone('US/Pacific'))
            try:
                result_generator = data.get_data(str_dataset_id
                                            ,list_requested_variables
                                            ,list_requested_filters
                                            ,pivot_column_variables
                                            ,empty_cell_dimensions
                                            ,user_id=api_session_user)
            except sqlalchemy.exc.DatabaseError as err:
                raise falcon.HTTPInternalServerError(
                    title='500'
                    ,description="Please try again"
                ) from err
            except data.NoSourceException as err:
                raise falcon.HTTPNotFound(description=("Source '{}' dataset not found:"
                                                       " {}").format(str_dataset_id,err)) from err
            except parameters.FilterVariableError as err:
                #TODO: the bad HTTP parameter not always 'filters',sometimes a user-defined param (implicit-filter)
                #TODO: perhaps parameters should raise two different Exceptions?
                raise falcon.HTTPInvalidParam(str(err), 'filters') from err
            except data.NotAuthorizedException as error:
                raise falcon.HTTPUnauthorized(
                    title='401'
                    ,description=("Selection from sensitive data source '{}'"
                                  " not authorized").format(str_dataset_id)
                ) from error
            str_format_type = get_requested_format_type( kwargs)
            resp.content_type = FormatUtil.get_http_content_type(str_format_type)
            for data_source in sources:
                if data_source['id'] == str_dataset_id:
                    formatter = FormatUtil(str_format_type, data_source, request, start_time)
                    result_stream = formatter.format(result_generator)
                    break
            chunked_stream = streaming.biggerchunks_stream(result_stream, 4)#2(13.6),3(13),4(
            if str_format_type == 'xlsx':
                byte_stream = chunked_stream #already bytes
            else:
                encoding = 'utf-8'
                if resp.content_type == 'text/csv':
                    encoding = 'utf-8-sig'
                byte_stream = codecs.iterencode(chunked_stream, encoding)
            resp.stream = byte_stream#content
Ejemplo n.º 10
0
 def on_post(self, request, resp, **kwargs):
     """
     Make copy of referenced DWSupport table, with specified changes
     """
     session_user = auth.get_user_id(request)
     with warehouse.get_source_model_session() as dwsupport_model:
         if not management_auth.is_management_permitted(session_user, dwsupport_model):
             msg = 'Warehouse management not authorized'
             raise falcon.HTTPUnauthorized(title='401', description=msg)
         #else
         sources = source.SourceUtil.get_list_of_data_sources(
              request.url
             ,auth.get_user_id(request)
             ,dwsupport_model)
         requested_source_id = selection.get_requested_dataset_id(sources, request, resp, kwargs)
         try:
             new_table = request.params['name']
             new_project = request.params['project-name']
             new_variable_custom_identifiers = request.params['variable-custom-identifiers']
         except KeyError as error:
             raise falcon.HTTPBadRequest( #TODO: add functional test coverage
                     title="Missing Parameter"
                     ,description=(
                        "Unable to make copy of"
                        " data source: '{}'."
                        " (Copy request must specify HTTP POST parameter: {})"
                        ).format(requested_source_id, error))
         try:
             new_custom_ids_by_old_id = json.loads(new_variable_custom_identifiers)
         except json.json.scanner.JSONDecodeError as e:
             msg = ("Unable to make copy of"
                    " data source: '{}'."
                    " (Parameter is not valid JSON object: {})"
                   ).format(requested_source_id, e)
             raise falcon.HTTPInvalidParam(msg, 'variable-custom-identifiers')
         if type(new_custom_ids_by_old_id) != dict:
             msg = ("Unable to make copy of"
                    " data source: '{}'."
                    ' Parameter must be a JSON object: {{"existing_table_custom_variable_id": "new_id"}}'
                   ).format(requested_source_id)
             raise falcon.HTTPInvalidParam(msg, 'variable-custom-identifiers')
         try:
             new_dto_tuple = configure.copy_table(
                  requested_source_id
                 ,new_project
                 ,new_table
                 ,new_custom_ids_by_old_id
             )
             new_table, new_associations, new_variables, \
             new_variable_custom_identifiers, new_queries = new_dto_tuple
             resp.body = json.dumps(
                  { 'table': new_table, 'associations': new_associations
                   ,'variables': new_variables
                   ,'variable_custom_identifiers': new_variable_custom_identifiers
                   ,'queries': new_queries}
                 ,indent='\t'
             )
             return
         except configure.CopyTableUnsupportedTableType as e:
             raise falcon.HTTPBadRequest( #TODO: add functional test coverage
                     title="Bad Path"
                     ,description=("Copy only supported for tables of type"
                                   " 'fact'. (The '{}' data source in URL is"
                                   " type: '{}')"
                                  ).format(requested_source_id, e)
             )
         except configure.CopyTableDuplicateCopyName as e:
             msg = ("Unable to make copy of"
                    " data source: '{}'."
                    " (Please specify a new table name, a table with"
                    " the provided name already exists: {})"
                   ).format(requested_source_id, e)
             raise falcon.HTTPInvalidParam(msg, 'name')
         except configure.CopyTableNonuniqueVariableCustomIdentifiers as e:
             msg = ("Unable to make copy of"
                    " data source: '{}'."
                    " (The following new IDs must not duplicate any other"
                    " variable custom IDs: {})"
                   ).format(requested_source_id, e)
             raise falcon.HTTPInvalidParam(msg, 'variable-custom-identifiers')
         except configure.CopyTableMissingVariableCustomIdentifiers as e:
             msg = ("Unable to make copy of"
                    " data source: '{}'."
                    " (Copy request parameter must include new, unique"
                    " IDs for these existing variable custom IDs: {})"
                   ).format(requested_source_id, e)
             raise falcon.HTTPInvalidParam(msg, 'variable-custom-identifiers')