def __init__(self, cell, probes):
        # The base C++ class constructor must be called first to ensure that all memory
        # in the C++ class is initialised correctly
        arbor.recipe.__init__(self)
        self.the_cell = cell
        self.the_probes = probes

        self.the_cat = arbor.default_catalogue()

        self.the_props = arbor.cable_global_properties()
Ejemplo n.º 2
0
    def __init__(self, cell, probes):
        # The base C++ class constructor must be called first, to ensure that
        # all memory in the C++ class is initialized correctly.
        arbor.recipe.__init__(self)
        self.the_cell = cell
        self.the_probes = probes

        self.the_cat = arbor.default_catalogue()
        self.the_cat.extend(arbor.allen_catalogue(), "")

        self.the_props = arbor.cable_global_properties()
        self.the_props.set_property(Vm=-65, tempK=300, rL=35.4, cm=0.01)
        self.the_props.set_ion(ion='na', int_con=10,   ext_con=140, rev_pot=50, method='nernst/na')
        self.the_props.set_ion(ion='k',  int_con=54.4, ext_con=2.5, rev_pot=-77)
        self.the_props.set_ion(ion='ca', int_con=5e-5, ext_con=2, rev_pot=132.5)

        self.the_props.register(self.the_cat)
Ejemplo n.º 3
0
    def __init__(self, cell, probes):
        # The base C++ class constructor must be called first to ensure that all memory
        # in the C++ class is initialised correctly
        arbor.recipe.__init__(self)
        self.the_cell = cell
        self.the_probes = probes

        self.the_cat = arbor.default_catalogue()

        self.the_props = arbor.cable_global_properties()
        self.the_props.set_property(Vm=-45, cm=0.01, rL=12000)
        self.the_props.set_ion(ion='na',
                               int_con=10,
                               ext_con=140,
                               rev_pot=50,
                               method='nernst/na')
        self.the_props.set_ion(ion='k', int_con=54.4, ext_con=2.5, rev_pot=-77)
        self.the_props.set_ion(ion='ca',
                               int_con=5e-5,
                               ext_con=2,
                               rev_pot=132.5)