def eye(pupil_queue, timebase, pipe_to_world, is_alive_flag, user_dir, version, eye_id, cap_src):
"""
Creates a window, gl context.
Grabs images from a capture.
Streams Pupil coordinates into g_pool.pupil_queue
"""
is_alive = Is_Alive_Manager(is_alive_flag)
with is_alive:
import logging
# Set up root logger for this process before doing imports of logged modules.
logger = logging.getLogger()
logger.setLevel(logging.INFO)
# remove inherited handlers
logger.handlers = []
# create file handler which logs even debug messages
fh = logging.FileHandler(os.path.join(user_dir,'eye%s.log'%eye_id),mode='w')
# fh.setLevel(logging.DEBUG)
# create console handler with a higher log level
ch = logging.StreamHandler()
ch.setLevel(logger.level+10)
# create formatter and add it to the handlers
formatter = logging.Formatter('Eye'+str(eye_id)+' Process: %(asctime)s - %(name)s - %(levelname)s - %(message)s')
fh.setFormatter(formatter)
formatter = logging.Formatter('EYE'+str(eye_id)+' Process [%(levelname)s] %(name)s : %(message)s')
ch.setFormatter(formatter)
# add the handlers to the logger
logger.addHandler(fh)
logger.addHandler(ch)
#silence noisy modules
logging.getLogger("OpenGL").setLevel(logging.ERROR)
# create logger for the context of this function
logger = logging.getLogger(__name__)
# We deferr the imports becasue of multiprocessing.
# Otherwise the world process each process also loads the other imports.
#general imports
import numpy as np
import cv2
#display
import glfw
from pyglui import ui,graph,cygl
from pyglui.cygl.utils import draw_points, RGBA, draw_polyline, Named_Texture, Sphere
import OpenGL.GL as gl
from gl_utils import basic_gl_setup,adjust_gl_view, clear_gl_screen ,make_coord_system_pixel_based,make_coord_system_norm_based, make_coord_system_eye_camera_based
from ui_roi import UIRoi
#monitoring
import psutil
import math
# helpers/utils
from file_methods import Persistent_Dict
from version_utils import VersionFormat
from methods import normalize, denormalize, Roi, timer
from video_capture import autoCreateCapture, FileCaptureError, EndofVideoFileError, CameraCaptureError
from av_writer import JPEG_Writer,AV_Writer
# Pupil detectors
from pupil_detectors import Detector_2D, Detector_3D
pupil_detectors = {Detector_2D.__name__:Detector_2D,Detector_3D.__name__:Detector_3D}
#UI Platform tweaks
if platform.system() == 'Linux':
scroll_factor = 10.0
window_position_default = (600,300*eye_id)
elif platform.system() == 'Windows':
scroll_factor = 1.0
window_position_default = (600,31+300*eye_id)
else:
scroll_factor = 1.0
window_position_default = (600,300*eye_id)
#g_pool holds variables for this process
g_pool = Global_Container()
# make some constants avaiable
g_pool.user_dir = user_dir
g_pool.version = version
g_pool.app = 'capture'
g_pool.pupil_queue = pupil_queue
g_pool.timebase = timebase
# Callback functions
def on_resize(window,w, h):
if not g_pool.iconified:
active_window = glfw.glfwGetCurrentContext()
glfw.glfwMakeContextCurrent(window)
g_pool.gui.update_window(w,h)
graph.adjust_size(w,h)
adjust_gl_view(w,h)
glfw.glfwMakeContextCurrent(active_window)
def on_key(window, key, scancode, action, mods):
g_pool.gui.update_key(key,scancode,action,mods)
def on_char(window,char):
g_pool.gui.update_char(char)
def on_iconify(window,iconified):
g_pool.iconified = iconified
def on_button(window,button, action, mods):
if g_pool.display_mode == 'roi':
if action == glfw.GLFW_RELEASE and g_pool.u_r.active_edit_pt:
g_pool.u_r.active_edit_pt = False
return # if the roi interacts we dont what the gui to interact as well
elif action == glfw.GLFW_PRESS:
pos = glfw.glfwGetCursorPos(window)
pos = normalize(pos,glfw.glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1-pos[0],1-pos[1]
pos = denormalize(pos,(frame.width,frame.height)) # Position in img pixels
if g_pool.u_r.mouse_over_edit_pt(pos,g_pool.u_r.handle_size+40,g_pool.u_r.handle_size+40):
return # if the roi interacts we dont what the gui to interact as well
g_pool.gui.update_button(button,action,mods)
def on_pos(window,x, y):
hdpi_factor = float(glfw.glfwGetFramebufferSize(window)[0]/glfw.glfwGetWindowSize(window)[0])
g_pool.gui.update_mouse(x*hdpi_factor,y*hdpi_factor)
if g_pool.u_r.active_edit_pt:
pos = normalize((x,y),glfw.glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1-pos[0],1-pos[1]
pos = denormalize(pos,(frame.width,frame.height) )
g_pool.u_r.move_vertex(g_pool.u_r.active_pt_idx,pos)
def on_scroll(window,x,y):
g_pool.gui.update_scroll(x,y*scroll_factor)
# load session persistent settings
session_settings = Persistent_Dict(os.path.join(g_pool.user_dir,'user_settings_eye%s'%eye_id))
if session_settings.get("version",VersionFormat('0.0')) < g_pool.version:
logger.info("Session setting are from older version of this app. I will not use those.")
session_settings.clear()
# Initialize capture
cap = autoCreateCapture(cap_src, timebase=g_pool.timebase)
default_settings = {'frame_size':(640,480),'frame_rate':60}
previous_settings = session_settings.get('capture_settings',None)
if previous_settings and previous_settings['name'] == cap.name:
cap.settings = previous_settings
else:
cap.settings = default_settings
# Test capture
try:
frame = cap.get_frame()
except CameraCaptureError:
logger.error("Could not retrieve image from capture")
cap.close()
return
#signal world that we are ready to go
# pipe_to_world.send('eye%s process ready'%eye_id)
# any object we attach to the g_pool object *from now on* will only be visible to this process!
# vars should be declared here to make them visible to the code reader.
g_pool.iconified = False
g_pool.capture = cap
g_pool.flip = session_settings.get('flip',False)
g_pool.display_mode = session_settings.get('display_mode','camera_image')
g_pool.display_mode_info_text = {'camera_image': "Raw eye camera image. This uses the least amount of CPU power",
'roi': "Click and drag on the blue circles to adjust the region of interest. The region should be as small as possible, but large enough to capture all pupil movements.",
'algorithm': "Algorithm display mode overlays a visualization of the pupil detection parameters on top of the eye video. Adjust parameters within the Pupil Detection menu below."}
g_pool.u_r = UIRoi(frame.img.shape)
g_pool.u_r.set(session_settings.get('roi',g_pool.u_r.get()))
def on_frame_size_change(new_size):
g_pool.u_r = UIRoi((new_size[1],new_size[0]))
cap.on_frame_size_change = on_frame_size_change
writer = None
pupil_detector_settings = session_settings.get('pupil_detector_settings',None)
last_pupil_detector = pupil_detectors[session_settings.get('last_pupil_detector',Detector_2D.__name__)]
g_pool.pupil_detector = last_pupil_detector(g_pool,pupil_detector_settings)
# UI callback functions
def set_scale(new_scale):
g_pool.gui.scale = new_scale
g_pool.gui.collect_menus()
def set_display_mode_info(val):
g_pool.display_mode = val
g_pool.display_mode_info.text = g_pool.display_mode_info_text[val]
def set_detector(new_detector):
g_pool.pupil_detector.cleanup()
g_pool.pupil_detector = new_detector(g_pool)
g_pool.pupil_detector.init_gui(g_pool.sidebar)
# Initialize glfw
glfw.glfwInit()
title = "eye %s"%eye_id
width,height = session_settings.get('window_size',(frame.width, frame.height))
main_window = glfw.glfwCreateWindow(width,height, title, None, None)
window_pos = session_settings.get('window_position',window_position_default)
glfw.glfwSetWindowPos(main_window,window_pos[0],window_pos[1])
glfw.glfwMakeContextCurrent(main_window)
cygl.utils.init()
# gl_state settings
basic_gl_setup()
g_pool.image_tex = Named_Texture()
g_pool.image_tex.update_from_frame(frame)
glfw.glfwSwapInterval(0)
sphere = Sphere(20)
#setup GUI
g_pool.gui = ui.UI()
g_pool.gui.scale = session_settings.get('gui_scale',1)
g_pool.sidebar = ui.Scrolling_Menu("Settings",pos=(-300,0),size=(0,0),header_pos='left')
general_settings = ui.Growing_Menu('General')
general_settings.append(ui.Slider('scale',g_pool.gui, setter=set_scale,step = .05,min=1.,max=2.5,label='Interface Size'))
general_settings.append(ui.Button('Reset window size',lambda: glfw.glfwSetWindowSize(main_window,frame.width,frame.height)) )
general_settings.append(ui.Switch('flip',g_pool,label='Flip image display'))
general_settings.append(ui.Selector('display_mode',g_pool,setter=set_display_mode_info,selection=['camera_image','roi','algorithm'], labels=['Camera Image', 'ROI', 'Algorithm'], label="Mode") )
g_pool.display_mode_info = ui.Info_Text(g_pool.display_mode_info_text[g_pool.display_mode])
general_settings.append(g_pool.display_mode_info)
g_pool.sidebar.append(general_settings)
g_pool.gui.append(g_pool.sidebar)
detector_selector = ui.Selector('pupil_detector',getter = lambda: g_pool.pupil_detector.__class__ ,setter=set_detector,selection=[Detector_2D, Detector_3D],labels=['C++ 2d detector', 'C++ 3d detector'], label="Detection method")
general_settings.append(detector_selector)
# let detector add its GUI
g_pool.pupil_detector.init_gui(g_pool.sidebar)
# let the camera add its GUI
g_pool.capture.init_gui(g_pool.sidebar)
# Register callbacks main_window
glfw.glfwSetFramebufferSizeCallback(main_window,on_resize)
glfw.glfwSetWindowIconifyCallback(main_window,on_iconify)
glfw.glfwSetKeyCallback(main_window,on_key)
glfw.glfwSetCharCallback(main_window,on_char)
glfw.glfwSetMouseButtonCallback(main_window,on_button)
glfw.glfwSetCursorPosCallback(main_window,on_pos)
glfw.glfwSetScrollCallback(main_window,on_scroll)
#set the last saved window size
on_resize(main_window, *glfw.glfwGetWindowSize(main_window))
# load last gui configuration
g_pool.gui.configuration = session_settings.get('ui_config',{})
#set up performance graphs
pid = os.getpid()
ps = psutil.Process(pid)
ts = frame.timestamp
cpu_graph = graph.Bar_Graph()
cpu_graph.pos = (20,130)
cpu_graph.update_fn = ps.cpu_percent
cpu_graph.update_rate = 5
cpu_graph.label = 'CPU %0.1f'
fps_graph = graph.Bar_Graph()
fps_graph.pos = (140,130)
fps_graph.update_rate = 5
fps_graph.label = "%0.0f FPS"
#create a timer to control window update frequency
window_update_timer = timer(1/60.)
def window_should_update():
return next(window_update_timer)
# Event loop
while not glfw.glfwWindowShouldClose(main_window):
if pipe_to_world.poll():
cmd = pipe_to_world.recv()
if cmd == 'Exit':
break
elif cmd == "Ping":
pipe_to_world.send("Pong")
command = None
else:
command,payload = cmd
if command == 'Set_Detection_Mapping_Mode':
if payload == '3d':
if not isinstance(g_pool.pupil_detector,Detector_3D):
set_detector(Detector_3D)
detector_selector.read_only = True
else:
set_detector(Detector_2D)
detector_selector.read_only = False
else:
command = None
# Get an image from the grabber
try:
frame = cap.get_frame()
except CameraCaptureError:
logger.error("Capture from Camera Failed. Stopping.")
break
except EndofVideoFileError:
logger.warning("Video File is done. Stopping")
cap.seek_to_frame(0)
frame = cap.get_frame()
#update performace graphs
t = frame.timestamp
dt,ts = t-ts,t
try:
fps_graph.add(1./dt)
except ZeroDivisionError:
pass
cpu_graph.update()
### RECORDING of Eye Video (on demand) ###
# Setup variables and lists for recording
if 'Rec_Start' == command:
record_path,raw_mode = payload
logger.info("Will save eye video to: %s"%record_path)
timestamps_path = os.path.join(record_path, "eye%s_timestamps.npy"%eye_id)
if raw_mode and frame.jpeg_buffer:
video_path = os.path.join(record_path, "eye%s.mp4"%eye_id)
writer = JPEG_Writer(video_path,cap.frame_rate)
else:
video_path = os.path.join(record_path, "eye%s.mp4"%eye_id)
writer = AV_Writer(video_path,cap.frame_rate)
timestamps = []
elif 'Rec_Stop' == command:
logger.info("Done recording.")
writer.release()
writer = None
np.save(timestamps_path,np.asarray(timestamps))
del timestamps
if writer:
writer.write_video_frame(frame)
timestamps.append(frame.timestamp)
# pupil ellipse detection
result = g_pool.pupil_detector.detect(frame, g_pool.u_r, g_pool.display_mode == 'algorithm')
result['id'] = eye_id
# stream the result
g_pool.pupil_queue.put(result)
# GL drawing
if window_should_update():
if not g_pool.iconified:
glfw.glfwMakeContextCurrent(main_window)
clear_gl_screen()
# switch to work in normalized coordinate space
if g_pool.display_mode == 'algorithm':
g_pool.image_tex.update_from_ndarray(frame.img)
elif g_pool.display_mode in ('camera_image','roi'):
g_pool.image_tex.update_from_ndarray(frame.gray)
else:
pass
make_coord_system_norm_based(g_pool.flip)
g_pool.image_tex.draw()
window_size = glfw.glfwGetWindowSize(main_window)
make_coord_system_pixel_based((frame.height,frame.width,3),g_pool.flip)
if result['method'] == '3d c++':
eye_ball = result['projected_sphere']
try:
pts = cv2.ellipse2Poly( (int(eye_ball['center'][0]),int(eye_ball['center'][1])),
(int(eye_ball['axes'][0]/2),int(eye_ball['axes'][1]/2)),
int(eye_ball['angle']),0,360,8)
except ValueError as e:
pass
else:
draw_polyline(pts,2,RGBA(0.,.9,.1,result['model_confidence']) )
if result['confidence'] >0:
if result.has_key('ellipse'):
pts = cv2.ellipse2Poly( (int(result['ellipse']['center'][0]),int(result['ellipse']['center'][1])),
(int(result['ellipse']['axes'][0]/2),int(result['ellipse']['axes'][1]/2)),
int(result['ellipse']['angle']),0,360,15)
confidence = result['confidence'] * 0.7 #scale it a little
draw_polyline(pts,1,RGBA(1.,0,0,confidence))
draw_points([result['ellipse']['center']],size=20,color=RGBA(1.,0.,0.,confidence),sharpness=1.)
# render graphs
graph.push_view()
fps_graph.draw()
cpu_graph.draw()
graph.pop_view()
# render GUI
g_pool.gui.update()
#render the ROI
if g_pool.display_mode == 'roi':
g_pool.u_r.draw(g_pool.gui.scale)
#update screen
glfw.glfwSwapBuffers(main_window)
glfw.glfwPollEvents()
g_pool.pupil_detector.visualize() #detector decides if we visualize or not
# END while running
# in case eye recording was still runnnig: Save&close
if writer:
logger.info("Done recording eye.")
writer = None
np.save(timestamps_path,np.asarray(timestamps))
glfw.glfwRestoreWindow(main_window) #need to do this for windows os
# save session persistent settings
session_settings['gui_scale'] = g_pool.gui.scale
session_settings['roi'] = g_pool.u_r.get()
session_settings['flip'] = g_pool.flip
session_settings['display_mode'] = g_pool.display_mode
session_settings['ui_config'] = g_pool.gui.configuration
session_settings['capture_settings'] = g_pool.capture.settings
session_settings['window_size'] = glfw.glfwGetWindowSize(main_window)
session_settings['window_position'] = glfw.glfwGetWindowPos(main_window)
session_settings['version'] = g_pool.version
session_settings['last_pupil_detector'] = g_pool.pupil_detector.__class__.__name__
session_settings['pupil_detector_settings'] = g_pool.pupil_detector.get_settings()
session_settings.close()
g_pool.pupil_detector.cleanup()
g_pool.gui.terminate()
glfw.glfwDestroyWindow(main_window)
glfw.glfwTerminate()
cap.close()
logger.debug("Process done")
def eye(pupil_queue, timebase, pipe_to_world, is_alive_flag, user_dir, version,
eye_id, cap_src):
"""
Creates a window, gl context.
Grabs images from a capture.
Streams Pupil coordinates into g_pool.pupil_queue
"""
is_alive = Is_Alive_Manager(is_alive_flag)
with is_alive:
import logging
# Set up root logger for this process before doing imports of logged modules.
logger = logging.getLogger()
logger.setLevel(logging.INFO)
# remove inherited handlers
logger.handlers = []
# create file handler which logs even debug messages
fh = logging.FileHandler(os.path.join(user_dir, 'eye%s.log' % eye_id),
mode='w')
# fh.setLevel(logging.DEBUG)
# create console handler with a higher log level
ch = logging.StreamHandler()
ch.setLevel(logger.level + 10)
# create formatter and add it to the handlers
formatter = logging.Formatter(
'Eye' + str(eye_id) +
' Process: %(asctime)s - %(name)s - %(levelname)s - %(message)s')
fh.setFormatter(formatter)
formatter = logging.Formatter(
'EYE' + str(eye_id) +
' Process [%(levelname)s] %(name)s : %(message)s')
ch.setFormatter(formatter)
# add the handlers to the logger
logger.addHandler(fh)
logger.addHandler(ch)
#silence noisy modules
logging.getLogger("OpenGL").setLevel(logging.ERROR)
logging.getLogger("libav").setLevel(logging.ERROR)
# create logger for the context of this function
logger = logging.getLogger(__name__)
# We deferr the imports becasue of multiprocessing.
# Otherwise the world process each process also loads the other imports.
#general imports
import numpy as np
import cv2
#display
import glfw
from pyglui import ui, graph, cygl
from pyglui.cygl.utils import draw_points, RGBA, draw_polyline, Named_Texture
from OpenGL.GL import GL_LINE_LOOP
from gl_utils import basic_gl_setup, adjust_gl_view, clear_gl_screen, make_coord_system_pixel_based, make_coord_system_norm_based
from ui_roi import UIRoi
#monitoring
import psutil
# helpers/utils
from file_methods import Persistent_Dict
from version_utils import VersionFormat
from methods import normalize, denormalize, Roi, timer
from video_capture import autoCreateCapture, FileCaptureError, EndofVideoFileError, CameraCaptureError
from av_writer import JPEG_Writer, AV_Writer
# Pupil detectors
from pupil_detectors import Canny_Detector, Detector_2D, Detector_3D
pupil_detectors = {
Canny_Detector.__name__: Canny_Detector,
Detector_2D.__name__: Detector_2D,
Detector_3D.__name__: Detector_3D
}
#UI Platform tweaks
if platform.system() == 'Linux':
scroll_factor = 10.0
window_position_default = (600, 300 * eye_id)
elif platform.system() == 'Windows':
scroll_factor = 1.0
window_position_default = (600, 31 + 300 * eye_id)
else:
scroll_factor = 1.0
window_position_default = (600, 300 * eye_id)
#g_pool holds variables for this process
g_pool = Global_Container()
# make some constants avaiable
g_pool.user_dir = user_dir
g_pool.version = version
g_pool.app = 'capture'
g_pool.pupil_queue = pupil_queue
g_pool.timebase = timebase
# Callback functions
def on_resize(window, w, h):
if not g_pool.iconified:
active_window = glfw.glfwGetCurrentContext()
glfw.glfwMakeContextCurrent(window)
g_pool.gui.update_window(w, h)
graph.adjust_size(w, h)
adjust_gl_view(w, h)
glfw.glfwMakeContextCurrent(active_window)
def on_key(window, key, scancode, action, mods):
g_pool.gui.update_key(key, scancode, action, mods)
def on_char(window, char):
g_pool.gui.update_char(char)
def on_iconify(window, iconified):
g_pool.iconified = iconified
def on_button(window, button, action, mods):
if g_pool.display_mode == 'roi':
if action == glfw.GLFW_RELEASE and g_pool.u_r.active_edit_pt:
g_pool.u_r.active_edit_pt = False
return # if the roi interacts we dont what the gui to interact as well
elif action == glfw.GLFW_PRESS:
pos = glfw.glfwGetCursorPos(window)
pos = normalize(pos, glfw.glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1 - pos[0], 1 - pos[1]
pos = denormalize(
pos,
(frame.width, frame.height)) # Position in img pixels
if g_pool.u_r.mouse_over_edit_pt(
pos, g_pool.u_r.handle_size + 40,
g_pool.u_r.handle_size + 40):
return # if the roi interacts we dont what the gui to interact as well
g_pool.gui.update_button(button, action, mods)
def on_pos(window, x, y):
hdpi_factor = float(
glfw.glfwGetFramebufferSize(window)[0] /
glfw.glfwGetWindowSize(window)[0])
g_pool.gui.update_mouse(x * hdpi_factor, y * hdpi_factor)
if g_pool.u_r.active_edit_pt:
pos = normalize((x, y), glfw.glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1 - pos[0], 1 - pos[1]
pos = denormalize(pos, (frame.width, frame.height))
g_pool.u_r.move_vertex(g_pool.u_r.active_pt_idx, pos)
def on_scroll(window, x, y):
g_pool.gui.update_scroll(x, y * scroll_factor)
# load session persistent settings
session_settings = Persistent_Dict(
os.path.join(g_pool.user_dir, 'user_settings_eye%s' % eye_id))
if session_settings.get("version",
VersionFormat('0.0')) < g_pool.version:
logger.info(
"Session setting are from older version of this app. I will not use those."
)
session_settings.clear()
# Initialize capture
cap = autoCreateCapture(cap_src, timebase=g_pool.timebase)
default_settings = {'frame_size': (640, 480), 'frame_rate': 60}
previous_settings = session_settings.get('capture_settings', None)
if previous_settings and previous_settings['name'] == cap.name:
cap.settings = previous_settings
else:
cap.settings = default_settings
# Test capture
try:
frame = cap.get_frame()
except CameraCaptureError:
logger.error("Could not retrieve image from capture")
cap.close()
return
#signal world that we are ready to go
# pipe_to_world.send('eye%s process ready'%eye_id)
# any object we attach to the g_pool object *from now on* will only be visible to this process!
# vars should be declared here to make them visible to the code reader.
g_pool.iconified = False
g_pool.capture = cap
g_pool.flip = session_settings.get('flip', False)
g_pool.display_mode = session_settings.get('display_mode',
'camera_image')
g_pool.display_mode_info_text = {
'camera_image':
"Raw eye camera image. This uses the least amount of CPU power",
'roi':
"Click and drag on the blue circles to adjust the region of interest. The region should be a small as possible but big enough to capture to pupil in its movements",
'algorithm':
"Algorithm display mode overlays a visualization of the pupil detection parameters on top of the eye video. Adjust parameters with in the Pupil Detection menu below."
}
g_pool.u_r = UIRoi(frame.img.shape)
g_pool.u_r.set(session_settings.get('roi', g_pool.u_r.get()))
def on_frame_size_change(new_size):
g_pool.u_r = UIRoi((new_size[1], new_size[0]))
cap.on_frame_size_change = on_frame_size_change
writer = None
pupil_detector_settings = session_settings.get(
'pupil_detector_settings', None)
last_pupil_detector = pupil_detectors[session_settings.get(
'last_pupil_detector', Detector_2D.__name__)]
g_pool.pupil_detector = last_pupil_detector(g_pool,
pupil_detector_settings)
# UI callback functions
def set_scale(new_scale):
g_pool.gui.scale = new_scale
g_pool.gui.collect_menus()
def set_display_mode_info(val):
g_pool.display_mode = val
g_pool.display_mode_info.text = g_pool.display_mode_info_text[val]
def set_detector(new_detector):
g_pool.pupil_detector.cleanup()
g_pool.pupil_detector = new_detector(g_pool)
g_pool.pupil_detector.init_gui(g_pool.sidebar)
# Initialize glfw
glfw.glfwInit()
title = "eye %s" % eye_id
width, height = session_settings.get('window_size',
(frame.width, frame.height))
main_window = glfw.glfwCreateWindow(width, height, title, None, None)
window_pos = session_settings.get('window_position',
window_position_default)
glfw.glfwSetWindowPos(main_window, window_pos[0], window_pos[1])
glfw.glfwMakeContextCurrent(main_window)
cygl.utils.init()
# gl_state settings
basic_gl_setup()
g_pool.image_tex = Named_Texture()
g_pool.image_tex.update_from_frame(frame)
glfw.glfwSwapInterval(0)
#setup GUI
g_pool.gui = ui.UI()
g_pool.gui.scale = session_settings.get('gui_scale', 1)
g_pool.sidebar = ui.Scrolling_Menu("Settings",
pos=(-300, 0),
size=(0, 0),
header_pos='left')
general_settings = ui.Growing_Menu('General')
general_settings.append(
ui.Slider('scale',
g_pool.gui,
setter=set_scale,
step=.05,
min=1.,
max=2.5,
label='Interface Size'))
general_settings.append(
ui.Button(
'Reset window size', lambda: glfw.glfwSetWindowSize(
main_window, frame.width, frame.height)))
general_settings.append(
ui.Switch('flip', g_pool, label='Flip image display'))
general_settings.append(
ui.Selector('display_mode',
g_pool,
setter=set_display_mode_info,
selection=['camera_image', 'roi', 'algorithm'],
labels=['Camera Image', 'ROI', 'Algorithm'],
label="Mode"))
g_pool.display_mode_info = ui.Info_Text(
g_pool.display_mode_info_text[g_pool.display_mode])
general_settings.append(g_pool.display_mode_info)
g_pool.sidebar.append(general_settings)
g_pool.gui.append(g_pool.sidebar)
detector_selector = ui.Selector(
'pupil_detector',
getter=lambda: g_pool.pupil_detector.__class__,
setter=set_detector,
selection=[Canny_Detector, Detector_2D, Detector_3D],
labels=[
'Python 2D detector', 'C++ 2d detector', 'C++ 3d detector'
],
label="Detection method")
general_settings.append(detector_selector)
# let detector add its GUI
g_pool.pupil_detector.init_gui(g_pool.sidebar)
# let the camera add its GUI
g_pool.capture.init_gui(g_pool.sidebar)
# Register callbacks main_window
glfw.glfwSetFramebufferSizeCallback(main_window, on_resize)
glfw.glfwSetWindowIconifyCallback(main_window, on_iconify)
glfw.glfwSetKeyCallback(main_window, on_key)
glfw.glfwSetCharCallback(main_window, on_char)
glfw.glfwSetMouseButtonCallback(main_window, on_button)
glfw.glfwSetCursorPosCallback(main_window, on_pos)
glfw.glfwSetScrollCallback(main_window, on_scroll)
#set the last saved window size
on_resize(main_window, *glfw.glfwGetWindowSize(main_window))
# load last gui configuration
g_pool.gui.configuration = session_settings.get('ui_config', {})
#set up performance graphs
pid = os.getpid()
ps = psutil.Process(pid)
ts = frame.timestamp
cpu_graph = graph.Bar_Graph()
cpu_graph.pos = (20, 130)
cpu_graph.update_fn = ps.cpu_percent
cpu_graph.update_rate = 5
cpu_graph.label = 'CPU %0.1f'
fps_graph = graph.Bar_Graph()
fps_graph.pos = (140, 130)
fps_graph.update_rate = 5
fps_graph.label = "%0.0f FPS"
#create a timer to control window update frequency
window_update_timer = timer(1 / 60.)
def window_should_update():
return next(window_update_timer)
# Event loop
while not glfw.glfwWindowShouldClose(main_window):
if pipe_to_world.poll():
cmd = pipe_to_world.recv()
if cmd == 'Exit':
break
elif cmd == "Ping":
pipe_to_world.send("Pong")
command = None
else:
command, payload = cmd
if command == 'Set_Detection_Mapping_Mode':
if payload == '3d':
if not isinstance(g_pool.pupil_detector, Detector_3D):
set_detector(Detector_3D)
detector_selector.read_only = True
else:
set_detector(Detector_2D)
detector_selector.read_only = False
else:
command = None
# Get an image from the grabber
try:
frame = cap.get_frame()
except CameraCaptureError:
logger.error("Capture from Camera Failed. Stopping.")
break
except EndofVideoFileError:
logger.warning("Video File is done. Stopping")
cap.seek_to_frame(0)
frame = cap.get_frame()
#update performace graphs
t = frame.timestamp
dt, ts = t - ts, t
try:
fps_graph.add(1. / dt)
except ZeroDivisionError:
pass
cpu_graph.update()
### RECORDING of Eye Video (on demand) ###
# Setup variables and lists for recording
if 'Rec_Start' == command:
record_path, raw_mode = payload
logger.info("Will save eye video to: %s" % record_path)
timestamps_path = os.path.join(record_path,
"eye%s_timestamps.npy" % eye_id)
if raw_mode and frame.jpeg_buffer:
video_path = os.path.join(record_path,
"eye%s.mp4" % eye_id)
writer = JPEG_Writer(video_path, cap.frame_rate)
else:
video_path = os.path.join(record_path,
"eye%s.mp4" % eye_id)
writer = AV_Writer(video_path, cap.frame_rate)
timestamps = []
elif 'Rec_Stop' == command:
logger.info("Done recording.")
writer.release()
writer = None
np.save(timestamps_path, np.asarray(timestamps))
del timestamps
if writer:
writer.write_video_frame(frame)
timestamps.append(frame.timestamp)
# pupil ellipse detection
result = g_pool.pupil_detector.detect(
frame, g_pool.u_r, g_pool.display_mode == 'algorithm')
result['id'] = eye_id
# stream the result
g_pool.pupil_queue.put(result)
# GL drawing
if window_should_update():
if not g_pool.iconified:
glfw.glfwMakeContextCurrent(main_window)
clear_gl_screen()
# switch to work in normalized coordinate space
if g_pool.display_mode == 'algorithm':
g_pool.image_tex.update_from_ndarray(frame.img)
elif g_pool.display_mode in ('camera_image', 'roi'):
g_pool.image_tex.update_from_ndarray(frame.gray)
else:
pass
make_coord_system_norm_based(g_pool.flip)
g_pool.image_tex.draw()
# switch to work in pixel space
make_coord_system_pixel_based(
(frame.height, frame.width, 3), g_pool.flip)
if result['confidence'] > 0:
if result.has_key('ellipse'):
pts = cv2.ellipse2Poly(
(int(result['ellipse']['center'][0]),
int(result['ellipse']['center'][1])),
(int(result['ellipse']['axes'][0] / 2),
int(result['ellipse']['axes'][1] / 2)),
int(result['ellipse']['angle']), 0, 360, 15)
draw_polyline(pts, 1, RGBA(1., 0, 0, .5))
draw_points([result['ellipse']['center']],
size=20,
color=RGBA(1., 0., 0., .5),
sharpness=1.)
# render graphs
graph.push_view()
fps_graph.draw()
cpu_graph.draw()
graph.pop_view()
# render GUI
g_pool.gui.update()
#render the ROI
if g_pool.display_mode == 'roi':
g_pool.u_r.draw(g_pool.gui.scale)
#update screen
glfw.glfwSwapBuffers(main_window)
glfw.glfwPollEvents()
g_pool.pupil_detector.visualize(
) #detector decides if we visualize or not
# END while running
# in case eye recording was still runnnig: Save&close
if writer:
logger.info("Done recording eye.")
writer = None
np.save(timestamps_path, np.asarray(timestamps))
glfw.glfwRestoreWindow(main_window) #need to do this for windows os
# save session persistent settings
session_settings['gui_scale'] = g_pool.gui.scale
session_settings['roi'] = g_pool.u_r.get()
session_settings['flip'] = g_pool.flip
session_settings['display_mode'] = g_pool.display_mode
session_settings['ui_config'] = g_pool.gui.configuration
session_settings['capture_settings'] = g_pool.capture.settings
session_settings['window_size'] = glfw.glfwGetWindowSize(main_window)
session_settings['window_position'] = glfw.glfwGetWindowPos(
main_window)
session_settings['version'] = g_pool.version
session_settings[
'last_pupil_detector'] = g_pool.pupil_detector.__class__.__name__
session_settings[
'pupil_detector_settings'] = g_pool.pupil_detector.get_settings()
session_settings.close()
g_pool.pupil_detector.cleanup()
g_pool.gui.terminate()
glfw.glfwDestroyWindow(main_window)
glfw.glfwTerminate()
cap.close()
logger.debug("Process done")
def eye(g_pool, cap_src, cap_size, pipe_to_world, eye_id=0):
"""
Creates a window, gl context.
Grabs images from a capture.
Streams Pupil coordinates into g_pool.pupil_queue
"""
# modify the root logger for this process
logger = logging.getLogger()
# remove inherited handlers
logger.handlers = []
# create file handler which logs even debug messages
fh = logging.FileHandler(os.path.join(g_pool.user_dir,
'eye%s.log' % eye_id),
mode='w')
# fh.setLevel(logging.DEBUG)
# create console handler with a higher log level
ch = logging.StreamHandler()
ch.setLevel(logger.level + 10)
# create formatter and add it to the handlers
formatter = logging.Formatter(
'Eye' + str(eye_id) +
' Process: %(asctime)s - %(name)s - %(levelname)s - %(message)s')
fh.setFormatter(formatter)
formatter = logging.Formatter(
'EYE' + str(eye_id) +
' Process [%(levelname)s] %(name)s : %(message)s')
ch.setFormatter(formatter)
# add the handlers to the logger
logger.addHandler(fh)
logger.addHandler(ch)
# create logger for the context of this function
logger = logging.getLogger(__name__)
#UI Platform tweaks
if platform.system() == 'Linux':
scroll_factor = 10.0
window_position_default = (600, 300 * eye_id)
elif platform.system() == 'Windows':
scroll_factor = 1.0
window_position_default = (600, 31 + 300 * eye_id)
else:
scroll_factor = 1.0
window_position_default = (600, 300 * eye_id)
# Callback functions
def on_resize(window, w, h):
if not g_pool.iconified:
active_window = glfwGetCurrentContext()
glfwMakeContextCurrent(window)
g_pool.gui.update_window(w, h)
graph.adjust_size(w, h)
adjust_gl_view(w, h)
glfwMakeContextCurrent(active_window)
def on_key(window, key, scancode, action, mods):
g_pool.gui.update_key(key, scancode, action, mods)
def on_char(window, char):
g_pool.gui.update_char(char)
def on_iconify(window, iconified):
g_pool.iconified = iconified
def on_button(window, button, action, mods):
if g_pool.display_mode == 'roi':
if action == GLFW_RELEASE and u_r.active_edit_pt:
u_r.active_edit_pt = False
return # if the roi interacts we dont what the gui to interact as well
elif action == GLFW_PRESS:
pos = glfwGetCursorPos(window)
pos = normalize(pos, glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1 - pos[0], 1 - pos[1]
pos = denormalize(
pos, (frame.width, frame.height)) # Position in img pixels
if u_r.mouse_over_edit_pt(pos, u_r.handle_size + 40,
u_r.handle_size + 40):
return # if the roi interacts we dont what the gui to interact as well
g_pool.gui.update_button(button, action, mods)
def on_pos(window, x, y):
hdpi_factor = float(
glfwGetFramebufferSize(window)[0] / glfwGetWindowSize(window)[0])
g_pool.gui.update_mouse(x * hdpi_factor, y * hdpi_factor)
if u_r.active_edit_pt:
pos = normalize((x, y), glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1 - pos[0], 1 - pos[1]
pos = denormalize(pos, (frame.width, frame.height))
u_r.move_vertex(u_r.active_pt_idx, pos)
def on_scroll(window, x, y):
g_pool.gui.update_scroll(x, y * scroll_factor)
def on_close(window):
g_pool.quit.value = True
logger.info('Process closing from window')
# load session persistent settings
session_settings = Persistent_Dict(
os.path.join(g_pool.user_dir, 'user_settings_eye%s' % eye_id))
if session_settings.get("version", VersionFormat('0.0')) < g_pool.version:
logger.info(
"Session setting are from older version of this app. I will not use those."
)
session_settings.clear()
# Initialize capture
cap = autoCreateCapture(cap_src, timebase=g_pool.timebase)
default_settings = {'frame_size': cap_size, 'frame_rate': 30}
previous_settings = session_settings.get('capture_settings', None)
if previous_settings and previous_settings['name'] == cap.name:
cap.settings = previous_settings
else:
cap.settings = default_settings
# Test capture
try:
frame = cap.get_frame()
except CameraCaptureError:
logger.error("Could not retrieve image from capture")
cap.close()
return
#signal world that we are ready to go
pipe_to_world.send('eye%s process ready' % eye_id)
# any object we attach to the g_pool object *from now on* will only be visible to this process!
# vars should be declared here to make them visible to the code reader.
g_pool.iconified = False
g_pool.capture = cap
g_pool.flip = session_settings.get('flip', False)
g_pool.display_mode = session_settings.get('display_mode', 'camera_image')
g_pool.display_mode_info_text = {
'camera_image':
"Raw eye camera image. This uses the least amount of CPU power",
'roi':
"Click and drag on the blue circles to adjust the region of interest. The region should be a small as possible but big enough to capture to pupil in its movements",
'algorithm':
"Algorithm display mode overlays a visualization of the pupil detection parameters on top of the eye video. Adjust parameters with in the Pupil Detection menu below."
}
# g_pool.draw_pupil = session_settings.get('draw_pupil',True)
u_r = UIRoi(frame.img.shape)
u_r.set(session_settings.get('roi', u_r.get()))
writer = None
pupil_detector = Canny_Detector(g_pool)
# UI callback functions
def set_scale(new_scale):
g_pool.gui.scale = new_scale
g_pool.gui.collect_menus()
def set_display_mode_info(val):
g_pool.display_mode = val
g_pool.display_mode_info.text = g_pool.display_mode_info_text[val]
# Initialize glfw
glfwInit()
if g_pool.binocular:
title = "Binocular eye %s" % eye_id
else:
title = 'Eye'
width, height = session_settings.get('window_size',
(frame.width, frame.height))
main_window = glfwCreateWindow(width, height, title, None, None)
window_pos = session_settings.get('window_position',
window_position_default)
glfwSetWindowPos(main_window, window_pos[0], window_pos[1])
glfwMakeContextCurrent(main_window)
cygl_init()
# gl_state settings
basic_gl_setup()
g_pool.image_tex = Named_Texture()
g_pool.image_tex.update_from_frame(frame)
glfwSwapInterval(0)
#setup GUI
g_pool.gui = ui.UI()
g_pool.gui.scale = session_settings.get('gui_scale', 1)
g_pool.sidebar = ui.Scrolling_Menu("Settings",
pos=(-300, 0),
size=(0, 0),
header_pos='left')
general_settings = ui.Growing_Menu('General')
general_settings.append(
ui.Slider('scale',
g_pool.gui,
setter=set_scale,
step=.05,
min=1.,
max=2.5,
label='Interface Size'))
general_settings.append(
ui.Button(
'Reset window size',
lambda: glfwSetWindowSize(main_window, frame.width, frame.height)))
general_settings.append(
ui.Selector('display_mode',
g_pool,
setter=set_display_mode_info,
selection=['camera_image', 'roi', 'algorithm'],
labels=['Camera Image', 'ROI', 'Algorithm'],
label="Mode"))
general_settings.append(
ui.Switch('flip', g_pool, label='Flip image display'))
g_pool.display_mode_info = ui.Info_Text(
g_pool.display_mode_info_text[g_pool.display_mode])
general_settings.append(g_pool.display_mode_info)
g_pool.sidebar.append(general_settings)
g_pool.gui.append(g_pool.sidebar)
# let the camera add its GUI
g_pool.capture.init_gui(g_pool.sidebar)
# let detector add its GUI
pupil_detector.init_gui(g_pool.sidebar)
# Register callbacks main_window
glfwSetFramebufferSizeCallback(main_window, on_resize)
glfwSetWindowCloseCallback(main_window, on_close)
glfwSetWindowIconifyCallback(main_window, on_iconify)
glfwSetKeyCallback(main_window, on_key)
glfwSetCharCallback(main_window, on_char)
glfwSetMouseButtonCallback(main_window, on_button)
glfwSetCursorPosCallback(main_window, on_pos)
glfwSetScrollCallback(main_window, on_scroll)
#set the last saved window size
on_resize(main_window, *glfwGetWindowSize(main_window))
# load last gui configuration
g_pool.gui.configuration = session_settings.get('ui_config', {})
#set up performance graphs
pid = os.getpid()
ps = psutil.Process(pid)
ts = frame.timestamp
cpu_graph = graph.Bar_Graph()
cpu_graph.pos = (20, 130)
cpu_graph.update_fn = ps.cpu_percent
cpu_graph.update_rate = 5
cpu_graph.label = 'CPU %0.1f'
fps_graph = graph.Bar_Graph()
fps_graph.pos = (140, 130)
fps_graph.update_rate = 5
fps_graph.label = "%0.0f FPS"
#create a timer to control window update frequency
window_update_timer = timer(1 / 60.)
def window_should_update():
return next(window_update_timer)
# Event loop
while not g_pool.quit.value:
# Get an image from the grabber
try:
frame = cap.get_frame()
except CameraCaptureError:
logger.error("Capture from Camera Failed. Stopping.")
break
except EndofVideoFileError:
logger.warning("Video File is done. Stopping")
break
#update performace graphs
t = frame.timestamp
dt, ts = t - ts, t
try:
fps_graph.add(1. / dt)
except ZeroDivisionError:
pass
cpu_graph.update()
### RECORDING of Eye Video (on demand) ###
# Setup variables and lists for recording
if pipe_to_world.poll():
command, raw_mode = pipe_to_world.recv()
if command is not None:
record_path = command
logger.info("Will save eye video to: %s" % record_path)
timestamps_path = os.path.join(record_path,
"eye%s_timestamps.npy" % eye_id)
if raw_mode and frame.jpeg_buffer:
video_path = os.path.join(record_path,
"eye%s.mp4" % eye_id)
writer = JPEG_Writer(video_path, cap.frame_rate)
else:
video_path = os.path.join(record_path,
"eye%s.mp4" % eye_id)
writer = AV_Writer(video_path, cap.frame_rate)
timestamps = []
else:
logger.info("Done recording.")
writer.release()
writer = None
np.save(timestamps_path, np.asarray(timestamps))
del timestamps
if writer:
writer.write_video_frame(frame)
timestamps.append(frame.timestamp)
# pupil ellipse detection
result = pupil_detector.detect(
frame, user_roi=u_r, visualize=g_pool.display_mode == 'algorithm')
result['id'] = eye_id
# stream the result
g_pool.pupil_queue.put(result)
# GL drawing
if window_should_update():
if not g_pool.iconified:
glfwMakeContextCurrent(main_window)
clear_gl_screen()
# switch to work in normalized coordinate space
if g_pool.display_mode == 'algorithm':
g_pool.image_tex.update_from_ndarray(frame.img)
elif g_pool.display_mode in ('camera_image', 'roi'):
g_pool.image_tex.update_from_ndarray(frame.gray)
else:
pass
make_coord_system_norm_based(g_pool.flip)
g_pool.image_tex.draw()
# switch to work in pixel space
make_coord_system_pixel_based((frame.height, frame.width, 3),
g_pool.flip)
if result['confidence'] > 0:
if result.has_key('axes'):
pts = cv2.ellipse2Poly((int(
result['center'][0]), int(result['center'][1])),
(int(result['axes'][0] / 2),
int(result['axes'][1] / 2)),
int(result['angle']), 0, 360,
15)
cygl_draw_polyline(pts, 1, cygl_rgba(1., 0, 0, .5))
cygl_draw_points([result['center']],
size=20,
color=cygl_rgba(1., 0., 0., .5),
sharpness=1.)
# render graphs
graph.push_view()
fps_graph.draw()
cpu_graph.draw()
graph.pop_view()
# render GUI
g_pool.gui.update()
#render the ROI
if g_pool.display_mode == 'roi':
u_r.draw(g_pool.gui.scale)
#update screen
glfwSwapBuffers(main_window)
glfwPollEvents()
# END while running
# in case eye recording was still runnnig: Save&close
if writer:
logger.info("Done recording eye.")
writer = None
np.save(timestamps_path, np.asarray(timestamps))
glfwRestoreWindow(main_window) #need to do this for windows os
# save session persistent settings
session_settings['gui_scale'] = g_pool.gui.scale
session_settings['roi'] = u_r.get()
session_settings['flip'] = g_pool.flip
session_settings['display_mode'] = g_pool.display_mode
session_settings['ui_config'] = g_pool.gui.configuration
session_settings['capture_settings'] = g_pool.capture.settings
session_settings['window_size'] = glfwGetWindowSize(main_window)
session_settings['window_position'] = glfwGetWindowPos(main_window)
session_settings['version'] = g_pool.version
session_settings.close()
pupil_detector.cleanup()
g_pool.gui.terminate()
glfwDestroyWindow(main_window)
glfwTerminate()
cap.close()
#flushing queue in case world process did not exit gracefully
while not g_pool.pupil_queue.empty():
g_pool.pupil_queue.get()
g_pool.pupil_queue.close()
logger.debug("Process done")
def eye(g_pool,cap_src,cap_size,pipe_to_world,eye_id=0):
"""
Creates a window, gl context.
Grabs images from a capture.
Streams Pupil coordinates into g_pool.pupil_queue
"""
# modify the root logger for this process
logger = logging.getLogger()
# remove inherited handlers
logger.handlers = []
# create file handler which logs even debug messages
fh = logging.FileHandler(os.path.join(g_pool.user_dir,'eye%s.log'%eye_id),mode='w')
# fh.setLevel(logging.DEBUG)
# create console handler with a higher log level
ch = logging.StreamHandler()
ch.setLevel(logger.level+10)
# create formatter and add it to the handlers
formatter = logging.Formatter('Eye'+str(eye_id)+' Process: %(asctime)s - %(name)s - %(levelname)s - %(message)s')
fh.setFormatter(formatter)
formatter = logging.Formatter('EYE'+str(eye_id)+' Process [%(levelname)s] %(name)s : %(message)s')
ch.setFormatter(formatter)
# add the handlers to the logger
logger.addHandler(fh)
logger.addHandler(ch)
# create logger for the context of this function
logger = logging.getLogger(__name__)
#UI Platform tweaks
if platform.system() == 'Linux':
scroll_factor = 10.0
window_position_default = (600,300*eye_id)
elif platform.system() == 'Windows':
scroll_factor = 1.0
window_position_default = (600,31+300*eye_id)
else:
scroll_factor = 1.0
window_position_default = (600,300*eye_id)
# Callback functions
def on_resize(window,w, h):
if not g_pool.iconified:
active_window = glfwGetCurrentContext()
glfwMakeContextCurrent(window)
g_pool.gui.update_window(w,h)
graph.adjust_size(w,h)
adjust_gl_view(w,h)
glfwMakeContextCurrent(active_window)
def on_key(window, key, scancode, action, mods):
g_pool.gui.update_key(key,scancode,action,mods)
def on_char(window,char):
g_pool.gui.update_char(char)
def on_iconify(window,iconified):
g_pool.iconified = iconified
def on_button(window,button, action, mods):
if g_pool.display_mode == 'roi':
if action == GLFW_RELEASE and u_r.active_edit_pt:
u_r.active_edit_pt = False
return # if the roi interacts we dont what the gui to interact as well
elif action == GLFW_PRESS:
pos = glfwGetCursorPos(window)
pos = normalize(pos,glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1-pos[0],1-pos[1]
pos = denormalize(pos,(frame.width,frame.height)) # Position in img pixels
if u_r.mouse_over_edit_pt(pos,u_r.handle_size+40,u_r.handle_size+40):
return # if the roi interacts we dont what the gui to interact as well
g_pool.gui.update_button(button,action,mods)
def on_pos(window,x, y):
hdpi_factor = float(glfwGetFramebufferSize(window)[0]/glfwGetWindowSize(window)[0])
g_pool.gui.update_mouse(x*hdpi_factor,y*hdpi_factor)
if u_r.active_edit_pt:
pos = normalize((x,y),glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1-pos[0],1-pos[1]
pos = denormalize(pos,(frame.width,frame.height) )
u_r.move_vertex(u_r.active_pt_idx,pos)
def on_scroll(window,x,y):
g_pool.gui.update_scroll(x,y*scroll_factor)
def on_close(window):
g_pool.quit.value = True
logger.info('Process closing from window')
# load session persistent settings
session_settings = Persistent_Dict(os.path.join(g_pool.user_dir,'user_settings_eye%s'%eye_id))
if session_settings.get("version",VersionFormat('0.0')) < g_pool.version:
logger.info("Session setting are from older version of this app. I will not use those.")
session_settings.clear()
# Initialize capture
cap = autoCreateCapture(cap_src, timebase=g_pool.timebase)
default_settings = {'frame_size':cap_size,'frame_rate':30}
previous_settings = session_settings.get('capture_settings',None)
if previous_settings and previous_settings['name'] == cap.name:
cap.settings = previous_settings
else:
cap.settings = default_settings
# Test capture
try:
frame = cap.get_frame()
except CameraCaptureError:
logger.error("Could not retrieve image from capture")
cap.close()
return
#signal world that we are ready to go
pipe_to_world.send('eye%s process ready'%eye_id)
# any object we attach to the g_pool object *from now on* will only be visible to this process!
# vars should be declared here to make them visible to the code reader.
g_pool.iconified = False
g_pool.capture = cap
g_pool.flip = session_settings.get('flip',False)
g_pool.display_mode = session_settings.get('display_mode','camera_image')
g_pool.display_mode_info_text = {'camera_image': "Raw eye camera image. This uses the least amount of CPU power",
'roi': "Click and drag on the blue circles to adjust the region of interest. The region should be a small as possible but big enough to capture to pupil in its movements",
'algorithm': "Algorithm display mode overlays a visualization of the pupil detection parameters on top of the eye video. Adjust parameters with in the Pupil Detection menu below."}
# g_pool.draw_pupil = session_settings.get('draw_pupil',True)
u_r = UIRoi(frame.img.shape)
u_r.set(session_settings.get('roi',u_r.get()))
writer = None
pupil_detector = Canny_Detector(g_pool)
# UI callback functions
def set_scale(new_scale):
g_pool.gui.scale = new_scale
g_pool.gui.collect_menus()
def set_display_mode_info(val):
g_pool.display_mode = val
g_pool.display_mode_info.text = g_pool.display_mode_info_text[val]
# Initialize glfw
glfwInit()
if g_pool.binocular:
title = "Binocular eye %s"%eye_id
else:
title = 'Eye'
width,height = session_settings.get('window_size',(frame.width, frame.height))
main_window = glfwCreateWindow(width,height, title, None, None)
window_pos = session_settings.get('window_position',window_position_default)
glfwSetWindowPos(main_window,window_pos[0],window_pos[1])
glfwMakeContextCurrent(main_window)
cygl_init()
# gl_state settings
basic_gl_setup()
g_pool.image_tex = create_named_texture(frame.img.shape)
update_named_texture(g_pool.image_tex,frame.img)
glfwSwapInterval(0)
#setup GUI
g_pool.gui = ui.UI()
g_pool.gui.scale = session_settings.get('gui_scale',1)
g_pool.sidebar = ui.Scrolling_Menu("Settings",pos=(-300,0),size=(0,0),header_pos='left')
general_settings = ui.Growing_Menu('General')
general_settings.append(ui.Slider('scale',g_pool.gui, setter=set_scale,step = .05,min=1.,max=2.5,label='Interface Size'))
general_settings.append(ui.Button('Reset window size',lambda: glfwSetWindowSize(main_window,frame.width,frame.height)) )
general_settings.append(ui.Selector('display_mode',g_pool,setter=set_display_mode_info,selection=['camera_image','roi','algorithm'], labels=['Camera Image', 'ROI', 'Algorithm'], label="Mode") )
general_settings.append(ui.Switch('flip',g_pool,label='Flip image display'))
g_pool.display_mode_info = ui.Info_Text(g_pool.display_mode_info_text[g_pool.display_mode])
general_settings.append(g_pool.display_mode_info)
g_pool.sidebar.append(general_settings)
g_pool.gui.append(g_pool.sidebar)
g_pool.gui.append(ui.Hot_Key("quit",setter=on_close,getter=lambda:True,label="X",hotkey=GLFW_KEY_ESCAPE))
# let the camera add its GUI
g_pool.capture.init_gui(g_pool.sidebar)
# let detector add its GUI
pupil_detector.init_gui(g_pool.sidebar)
# Register callbacks main_window
glfwSetFramebufferSizeCallback(main_window,on_resize)
glfwSetWindowCloseCallback(main_window,on_close)
glfwSetWindowIconifyCallback(main_window,on_iconify)
glfwSetKeyCallback(main_window,on_key)
glfwSetCharCallback(main_window,on_char)
glfwSetMouseButtonCallback(main_window,on_button)
glfwSetCursorPosCallback(main_window,on_pos)
glfwSetScrollCallback(main_window,on_scroll)
#set the last saved window size
on_resize(main_window, *glfwGetWindowSize(main_window))
# load last gui configuration
g_pool.gui.configuration = session_settings.get('ui_config',{})
#set up performance graphs
pid = os.getpid()
ps = psutil.Process(pid)
ts = frame.timestamp
cpu_graph = graph.Bar_Graph()
cpu_graph.pos = (20,130)
cpu_graph.update_fn = ps.cpu_percent
cpu_graph.update_rate = 5
cpu_graph.label = 'CPU %0.1f'
fps_graph = graph.Bar_Graph()
fps_graph.pos = (140,130)
fps_graph.update_rate = 5
fps_graph.label = "%0.0f FPS"
#create a timer to control window update frequency
window_update_timer = timer(1/60.)
def window_should_update():
return next(window_update_timer)
# Event loop
while not g_pool.quit.value:
# Get an image from the grabber
try:
frame = cap.get_frame()
except CameraCaptureError:
logger.error("Capture from Camera Failed. Stopping.")
break
except EndofVideoFileError:
logger.warning("Video File is done. Stopping")
break
#update performace graphs
t = frame.timestamp
dt,ts = t-ts,t
try:
fps_graph.add(1./dt)
except ZeroDivisionError:
pass
cpu_graph.update()
### RECORDING of Eye Video (on demand) ###
# Setup variables and lists for recording
if pipe_to_world.poll():
command,raw_mode = pipe_to_world.recv()
if command is not None:
record_path = command
logger.info("Will save eye video to: %s"%record_path)
timestamps_path = os.path.join(record_path, "eye%s_timestamps.npy"%eye_id)
if raw_mode and hasattr(frame,'jpeg_buffer') :
video_path = os.path.join(record_path, "eye%s.mp4"%eye_id)
writer = JPEG_Writer(video_path,cap.frame_rate)
else:
video_path = os.path.join(record_path, "eye%s.mkv"%eye_id)
writer = CV_Writer(video_path,float(cap.frame_rate), cap.frame_size)
timestamps = []
else:
logger.info("Done recording.")
writer.release()
writer = None
np.save(timestamps_path,np.asarray(timestamps))
del timestamps
if writer:
writer.write_video_frame(frame)
timestamps.append(frame.timestamp)
# pupil ellipse detection
result = pupil_detector.detect(frame,user_roi=u_r,visualize=g_pool.display_mode == 'algorithm')
result['id'] = eye_id
# stream the result
g_pool.pupil_queue.put(result)
# GL drawing
if window_should_update():
if not g_pool.iconified:
glfwMakeContextCurrent(main_window)
clear_gl_screen()
# switch to work in normalized coordinate space
if g_pool.display_mode == 'algorithm':
update_named_texture(g_pool.image_tex,frame.img)
elif g_pool.display_mode in ('camera_image','roi'):
update_named_texture(g_pool.image_tex,frame.gray)
else:
pass
make_coord_system_norm_based(g_pool.flip)
draw_named_texture(g_pool.image_tex)
# switch to work in pixel space
make_coord_system_pixel_based((frame.height,frame.width,3),g_pool.flip)
if result['confidence'] >0:
if result.has_key('axes'):
pts = cv2.ellipse2Poly( (int(result['center'][0]),int(result['center'][1])),
(int(result['axes'][0]/2),int(result['axes'][1]/2)),
int(result['angle']),0,360,15)
cygl_draw_polyline(pts,1,cygl_rgba(1.,0,0,.5))
cygl_draw_points([result['center']],size=20,color=cygl_rgba(1.,0.,0.,.5),sharpness=1.)
# render graphs
graph.push_view()
fps_graph.draw()
cpu_graph.draw()
graph.pop_view()
# render GUI
g_pool.gui.update()
#render the ROI
if g_pool.display_mode == 'roi':
u_r.draw(g_pool.gui.scale)
#update screen
glfwSwapBuffers(main_window)
glfwPollEvents()
# END while running
# in case eye recording was still runnnig: Save&close
if writer:
logger.info("Done recording eye.")
writer = None
np.save(timestamps_path,np.asarray(timestamps))
glfwRestoreWindow(main_window) #need to do this for windows os
# save session persistent settings
session_settings['gui_scale'] = g_pool.gui.scale
session_settings['roi'] = u_r.get()
session_settings['flip'] = g_pool.flip
session_settings['display_mode'] = g_pool.display_mode
session_settings['ui_config'] = g_pool.gui.configuration
session_settings['capture_settings'] = g_pool.capture.settings
session_settings['window_size'] = glfwGetWindowSize(main_window)
session_settings['window_position'] = glfwGetWindowPos(main_window)
session_settings['version'] = g_pool.version
session_settings.close()
pupil_detector.cleanup()
g_pool.gui.terminate()
glfwDestroyWindow(main_window)
glfwTerminate()
cap.close()
#flushing queue in case world process did not exit gracefully
while not g_pool.pupil_queue.empty():
g_pool.pupil_queue.get()
g_pool.pupil_queue.close()
logger.debug("Process done")
def eye(timebase,
is_alive_flag,
ipc_pub_url,
ipc_sub_url,
ipc_push_url,
user_dir,
version,
eye_id,
overwrite_cap_settings=None):
"""reads eye video and detects the pupil.
Creates a window, gl context.
Grabs images from a capture.
Streams Pupil coordinates.
Reacts to notifications:
``set_detection_mapping_mode``: Sets detection method
``eye_process.should_stop``: Stops the eye process
``recording.started``: Starts recording eye video
``recording.stopped``: Stops recording eye video
``frame_publishing.started``: Starts frame publishing
``frame_publishing.stopped``: Stops frame publishing
Emits notifications:
``eye_process.started``: Eye process started
``eye_process.stopped``: Eye process stopped
Emits data:
``pupil.<eye id>``: Pupil data for eye with id ``<eye id>``
``frame.eye.<eye id>``: Eye frames with id ``<eye id>``
"""
# We deferr the imports becasue of multiprocessing.
# Otherwise the world process each process also loads the other imports.
import zmq
import zmq_tools
zmq_ctx = zmq.Context()
ipc_socket = zmq_tools.Msg_Dispatcher(zmq_ctx, ipc_push_url)
pupil_socket = zmq_tools.Msg_Streamer(zmq_ctx, ipc_pub_url)
notify_sub = zmq_tools.Msg_Receiver(zmq_ctx,
ipc_sub_url,
topics=("notify", ))
with Is_Alive_Manager(is_alive_flag, ipc_socket, eye_id):
#logging setup
import logging
logging.getLogger("OpenGL").setLevel(logging.ERROR)
logger = logging.getLogger()
logger.handlers = []
logger.addHandler(zmq_tools.ZMQ_handler(zmq_ctx, ipc_push_url))
# create logger for the context of this function
logger = logging.getLogger(__name__)
#general imports
import numpy as np
import cv2
#display
import glfw
from pyglui import ui, graph, cygl
from pyglui.cygl.utils import draw_points, RGBA, draw_polyline, Named_Texture, Sphere
import OpenGL.GL as gl
from gl_utils import basic_gl_setup, adjust_gl_view, clear_gl_screen, make_coord_system_pixel_based, make_coord_system_norm_based, make_coord_system_eye_camera_based, is_window_visible
from ui_roi import UIRoi
#monitoring
import psutil
import math
# helpers/utils
from uvc import get_time_monotonic, StreamError
from file_methods import Persistent_Dict
from version_utils import VersionFormat
from methods import normalize, denormalize, Roi, timer
from av_writer import JPEG_Writer, AV_Writer
from video_capture import InitialisationError, StreamError, Fake_Source, EndofVideoFileError, source_classes, manager_classes
source_by_name = {src.class_name(): src for src in source_classes}
# Pupil detectors
from pupil_detectors import Detector_2D, Detector_3D
pupil_detectors = {
Detector_2D.__name__: Detector_2D,
Detector_3D.__name__: Detector_3D
}
#UI Platform tweaks
if platform.system() == 'Linux':
scroll_factor = 10.0
window_position_default = (600, 300 * eye_id)
elif platform.system() == 'Windows':
scroll_factor = 1.0
window_position_default = (600, 31 + 300 * eye_id)
else:
scroll_factor = 1.0
window_position_default = (600, 300 * eye_id)
#g_pool holds variables for this process
g_pool = Global_Container()
# make some constants avaiable
g_pool.user_dir = user_dir
g_pool.version = version
g_pool.app = 'capture'
g_pool.timebase = timebase
g_pool.ipc_pub = ipc_socket
def get_timestamp():
return get_time_monotonic() - g_pool.timebase.value
g_pool.get_timestamp = get_timestamp
g_pool.get_now = get_time_monotonic
# Callback functions
def on_resize(window, w, h):
if is_window_visible(window):
active_window = glfw.glfwGetCurrentContext()
glfw.glfwMakeContextCurrent(window)
g_pool.gui.update_window(w, h)
graph.adjust_size(w, h)
adjust_gl_view(w, h)
glfw.glfwMakeContextCurrent(active_window)
def on_key(window, key, scancode, action, mods):
g_pool.gui.update_key(key, scancode, action, mods)
def on_char(window, char):
g_pool.gui.update_char(char)
def on_iconify(window, iconified):
g_pool.iconified = iconified
def on_button(window, button, action, mods):
if g_pool.display_mode == 'roi':
if action == glfw.GLFW_RELEASE and g_pool.u_r.active_edit_pt:
g_pool.u_r.active_edit_pt = False
return # if the roi interacts we dont what the gui to interact as well
elif action == glfw.GLFW_PRESS:
pos = glfw.glfwGetCursorPos(window)
pos = normalize(pos, glfw.glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1 - pos[0], 1 - pos[1]
pos = denormalize(
pos,
(frame.width, frame.height)) # Position in img pixels
if g_pool.u_r.mouse_over_edit_pt(
pos, g_pool.u_r.handle_size + 40,
g_pool.u_r.handle_size + 40):
return # if the roi interacts we dont what the gui to interact as well
g_pool.gui.update_button(button, action, mods)
def on_pos(window, x, y):
hdpi_factor = float(
glfw.glfwGetFramebufferSize(window)[0] /
glfw.glfwGetWindowSize(window)[0])
g_pool.gui.update_mouse(x * hdpi_factor, y * hdpi_factor)
if g_pool.u_r.active_edit_pt:
pos = normalize((x, y), glfw.glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1 - pos[0], 1 - pos[1]
pos = denormalize(pos, (frame.width, frame.height))
g_pool.u_r.move_vertex(g_pool.u_r.active_pt_idx, pos)
def on_scroll(window, x, y):
g_pool.gui.update_scroll(x, y * scroll_factor)
# load session persistent settings
session_settings = Persistent_Dict(
os.path.join(g_pool.user_dir, 'user_settings_eye%s' % eye_id))
if session_settings.get("version",
VersionFormat('0.0')) < g_pool.version:
logger.info(
"Session setting are from older version of this app. I will not use those."
)
session_settings.clear()
capture_manager_settings = session_settings.get(
'capture_manager_settings', ('UVC_Manager', {}))
if eye_id == 0:
cap_src = [
"Pupil Cam1 ID0", "HD-6000", "Integrated Camera",
"HD USB Camera", "USB 2.0 Camera"
]
else:
cap_src = ["Pupil Cam1 ID1", "HD-6000", "Integrated Camera"]
# Initialize capture
default_settings = {
'source_class_name': 'UVC_Source',
'preferred_names': cap_src,
'frame_size': (640, 480),
'frame_rate': 90
}
settings = overwrite_cap_settings or session_settings.get(
'capture_settings', default_settings)
try:
cap = source_by_name[settings['source_class_name']](g_pool,
**settings)
except (KeyError, InitialisationError) as e:
if isinstance(e, KeyError):
logger.warning(
'Incompatible capture setting encountered. Falling back to fake source.'
)
cap = Fake_Source(g_pool, **settings)
g_pool.iconified = False
g_pool.capture = cap
g_pool.capture_manager = None
g_pool.flip = session_settings.get('flip', False)
g_pool.display_mode = session_settings.get('display_mode',
'camera_image')
g_pool.display_mode_info_text = {
'camera_image':
"Raw eye camera image. This uses the least amount of CPU power",
'roi':
"Click and drag on the blue circles to adjust the region of interest. The region should be as small as possible, but large enough to capture all pupil movements.",
'algorithm':
"Algorithm display mode overlays a visualization of the pupil detection parameters on top of the eye video. Adjust parameters within the Pupil Detection menu below."
}
g_pool.u_r = UIRoi(
(g_pool.capture.frame_size[1], g_pool.capture.frame_size[0]))
roi_user_settings = session_settings.get('roi')
if roi_user_settings and roi_user_settings[-1] == g_pool.u_r.get()[-1]:
g_pool.u_r.set(roi_user_settings)
writer = None
pupil_detector_settings = session_settings.get(
'pupil_detector_settings', None)
last_pupil_detector = pupil_detectors[session_settings.get(
'last_pupil_detector', Detector_2D.__name__)]
g_pool.pupil_detector = last_pupil_detector(g_pool,
pupil_detector_settings)
# UI callback functions
def set_scale(new_scale):
g_pool.gui.scale = new_scale
g_pool.gui.collect_menus()
def set_display_mode_info(val):
g_pool.display_mode = val
g_pool.display_mode_info.text = g_pool.display_mode_info_text[val]
def set_detector(new_detector):
g_pool.pupil_detector.cleanup()
g_pool.pupil_detector = new_detector(g_pool)
g_pool.pupil_detector.init_gui(g_pool.sidebar)
# Initialize glfw
glfw.glfwInit()
title = "eye %s" % eye_id
width, height = session_settings.get('window_size',
g_pool.capture.frame_size)
main_window = glfw.glfwCreateWindow(width, height, title, None, None)
window_pos = session_settings.get('window_position',
window_position_default)
glfw.glfwSetWindowPos(main_window, window_pos[0], window_pos[1])
glfw.glfwMakeContextCurrent(main_window)
cygl.utils.init()
# gl_state settings
basic_gl_setup()
g_pool.image_tex = Named_Texture()
glfw.glfwSwapInterval(0)
#setup GUI
g_pool.gui = ui.UI()
g_pool.gui.scale = session_settings.get('gui_scale', 1)
g_pool.sidebar = ui.Scrolling_Menu("Settings",
pos=(-300, 0),
size=(0, 0),
header_pos='left')
general_settings = ui.Growing_Menu('General')
general_settings.append(
ui.Slider('scale',
g_pool.gui,
setter=set_scale,
step=.05,
min=1.,
max=2.5,
label='Interface Size'))
general_settings.append(
ui.Button(
'Reset window size', lambda: glfw.glfwSetWindowSize(
main_window, frame.width, frame.height)))
general_settings.append(
ui.Switch('flip', g_pool, label='Flip image display'))
general_settings.append(
ui.Selector('display_mode',
g_pool,
setter=set_display_mode_info,
selection=['camera_image', 'roi', 'algorithm'],
labels=['Camera Image', 'ROI', 'Algorithm'],
label="Mode"))
g_pool.display_mode_info = ui.Info_Text(
g_pool.display_mode_info_text[g_pool.display_mode])
general_settings.append(g_pool.display_mode_info)
g_pool.gui.append(g_pool.sidebar)
detector_selector = ui.Selector(
'pupil_detector',
getter=lambda: g_pool.pupil_detector.__class__,
setter=set_detector,
selection=[Detector_2D, Detector_3D],
labels=['C++ 2d detector', 'C++ 3d detector'],
label="Detection method")
general_settings.append(detector_selector)
g_pool.capture_selector_menu = ui.Growing_Menu('Capture Selection')
g_pool.capture_source_menu = ui.Growing_Menu('Capture Source')
g_pool.capture.init_gui()
g_pool.sidebar.append(general_settings)
g_pool.sidebar.append(g_pool.capture_selector_menu)
g_pool.sidebar.append(g_pool.capture_source_menu)
g_pool.pupil_detector.init_gui(g_pool.sidebar)
manager_class_name, manager_settings = capture_manager_settings
manager_class_by_name = {c.__name__: c for c in manager_classes}
g_pool.capture_manager = manager_class_by_name[manager_class_name](
g_pool, **manager_settings)
g_pool.capture_manager.init_gui()
def open_manager(manager_class):
g_pool.capture_manager.cleanup()
g_pool.capture_manager = manager_class(g_pool)
g_pool.capture_manager.init_gui()
#We add the capture selection menu, after a manager has been added:
g_pool.capture_selector_menu.insert(
0,
ui.Selector('capture_manager',
g_pool,
setter=open_manager,
getter=lambda: g_pool.capture_manager.__class__,
selection=manager_classes,
labels=[b.gui_name for b in manager_classes],
label='Manager'))
# Register callbacks main_window
glfw.glfwSetFramebufferSizeCallback(main_window, on_resize)
glfw.glfwSetWindowIconifyCallback(main_window, on_iconify)
glfw.glfwSetKeyCallback(main_window, on_key)
glfw.glfwSetCharCallback(main_window, on_char)
glfw.glfwSetMouseButtonCallback(main_window, on_button)
glfw.glfwSetCursorPosCallback(main_window, on_pos)
glfw.glfwSetScrollCallback(main_window, on_scroll)
#set the last saved window size
on_resize(main_window, *glfw.glfwGetWindowSize(main_window))
# load last gui configuration
g_pool.gui.configuration = session_settings.get('ui_config', {})
#set up performance graphs
pid = os.getpid()
ps = psutil.Process(pid)
ts = g_pool.get_timestamp()
cpu_graph = graph.Bar_Graph()
cpu_graph.pos = (20, 130)
cpu_graph.update_fn = ps.cpu_percent
cpu_graph.update_rate = 5
cpu_graph.label = 'CPU %0.1f'
fps_graph = graph.Bar_Graph()
fps_graph.pos = (140, 130)
fps_graph.update_rate = 5
fps_graph.label = "%0.0f FPS"
should_publish_frames = False
frame_publish_format = 'jpeg'
#create a timer to control window update frequency
window_update_timer = timer(1 / 60.)
def window_should_update():
return next(window_update_timer)
logger.warning('Process started.')
# Event loop
while not glfw.glfwWindowShouldClose(main_window):
if notify_sub.new_data:
t, notification = notify_sub.recv()
subject = notification['subject']
if subject == 'eye_process.should_stop':
if notification['eye_id'] == eye_id:
break
elif subject == 'set_detection_mapping_mode':
if notification['mode'] == '3d':
if not isinstance(g_pool.pupil_detector, Detector_3D):
set_detector(Detector_3D)
detector_selector.read_only = True
else:
if not isinstance(g_pool.pupil_detector, Detector_2D):
set_detector(Detector_2D)
detector_selector.read_only = False
elif subject == 'recording.started':
if notification['record_eye']:
record_path = notification['rec_path']
raw_mode = notification['compression']
logger.info("Will save eye video to: %s" % record_path)
timestamps_path = os.path.join(
record_path, "eye%s_timestamps.npy" % eye_id)
if raw_mode and frame.jpeg_buffer:
video_path = os.path.join(record_path,
"eye%s.mp4" % eye_id)
writer = JPEG_Writer(video_path,
g_pool.capture.frame_rate)
else:
video_path = os.path.join(record_path,
"eye%s.mp4" % eye_id)
writer = AV_Writer(video_path,
g_pool.capture.frame_rate)
timestamps = []
elif subject == 'recording.stopped':
if writer:
logger.info("Done recording.")
writer.release()
writer = None
np.save(timestamps_path, np.asarray(timestamps))
del timestamps
elif subject.startswith('meta.should_doc'):
ipc_socket.notify({
'subject': 'meta.doc',
'actor': 'eye%i' % eye_id,
'doc': eye.__doc__
})
elif subject.startswith('frame_publishing.started'):
should_publish_frames = True
frame_publish_format = notification.get('format', 'jpeg')
elif subject.startswith('frame_publishing.stopped'):
should_publish_frames = False
frame_publish_format = 'jpeg'
else:
g_pool.capture_manager.on_notify(notification)
# Get an image from the grabber
try:
frame = g_pool.capture.get_frame()
except StreamError as e:
logger.error("Error getting frame. Stopping eye process.")
logger.debug("Caught error: %s" % e)
break
except EndofVideoFileError:
logger.warning("Video File is done. Stopping")
g_pool.capture.seek_to_frame(0)
frame = g_pool.capture.get_frame()
g_pool.u_r = UIRoi((frame.height, frame.width))
g_pool.capture_manager.update(frame, {})
if should_publish_frames and frame.jpeg_buffer:
if frame_publish_format == "jpeg":
data = frame.jpeg_buffer
elif frame_publish_format == "yuv":
data = frame.yuv_buffer
elif frame_publish_format == "bgr":
data = frame.bgr
elif frame_publish_format == "gray":
data = frame.gray
pupil_socket.send(
'frame.eye.%s' % eye_id, {
'width': frame.width,
'height': frame.width,
'index': frame.index,
'timestamp': frame.timestamp,
'format': frame_publish_format,
'__raw_data__': [data]
})
#update performace graphs
t = frame.timestamp
dt, ts = t - ts, t
try:
fps_graph.add(1. / dt)
except ZeroDivisionError:
pass
cpu_graph.update()
if writer:
writer.write_video_frame(frame)
timestamps.append(frame.timestamp)
# pupil ellipse detection
result = g_pool.pupil_detector.detect(
frame, g_pool.u_r, g_pool.display_mode == 'algorithm')
result['id'] = eye_id
# stream the result
pupil_socket.send('pupil.%s' % eye_id, result)
# GL drawing
if window_should_update():
if is_window_visible(main_window):
glfw.glfwMakeContextCurrent(main_window)
clear_gl_screen()
# switch to work in normalized coordinate space
if g_pool.display_mode == 'algorithm':
g_pool.image_tex.update_from_ndarray(frame.img)
elif g_pool.display_mode in ('camera_image', 'roi'):
g_pool.image_tex.update_from_ndarray(frame.gray)
else:
pass
make_coord_system_norm_based(g_pool.flip)
g_pool.image_tex.draw()
window_size = glfw.glfwGetWindowSize(main_window)
make_coord_system_pixel_based(
(frame.height, frame.width, 3), g_pool.flip)
g_pool.capture.gl_display()
if result['method'] == '3d c++':
eye_ball = result['projected_sphere']
try:
pts = cv2.ellipse2Poly(
(int(eye_ball['center'][0]),
int(eye_ball['center'][1])),
(int(eye_ball['axes'][0] / 2),
int(eye_ball['axes'][1] / 2)),
int(eye_ball['angle']), 0, 360, 8)
except ValueError as e:
pass
else:
draw_polyline(
pts, 2,
RGBA(0., .9, .1, result['model_confidence']))
if result['confidence'] > 0:
if result.has_key('ellipse'):
pts = cv2.ellipse2Poly(
(int(result['ellipse']['center'][0]),
int(result['ellipse']['center'][1])),
(int(result['ellipse']['axes'][0] / 2),
int(result['ellipse']['axes'][1] / 2)),
int(result['ellipse']['angle']), 0, 360, 15)
confidence = result[
'confidence'] * 0.7 #scale it a little
draw_polyline(pts, 1, RGBA(1., 0, 0, confidence))
draw_points([result['ellipse']['center']],
size=20,
color=RGBA(1., 0., 0., confidence),
sharpness=1.)
# render graphs
graph.push_view()
fps_graph.draw()
cpu_graph.draw()
graph.pop_view()
# render GUI
g_pool.gui.update()
#render the ROI
g_pool.u_r.draw(g_pool.gui.scale)
if g_pool.display_mode == 'roi':
g_pool.u_r.draw_points(g_pool.gui.scale)
#update screen
glfw.glfwSwapBuffers(main_window)
glfw.glfwPollEvents()
g_pool.pupil_detector.visualize(
) #detector decides if we visualize or not
# END while running
# in case eye recording was still runnnig: Save&close
if writer:
logger.info("Done recording eye.")
writer = None
np.save(timestamps_path, np.asarray(timestamps))
glfw.glfwRestoreWindow(main_window) #need to do this for windows os
# save session persistent settings
session_settings['gui_scale'] = g_pool.gui.scale
session_settings['roi'] = g_pool.u_r.get()
session_settings['flip'] = g_pool.flip
session_settings['display_mode'] = g_pool.display_mode
session_settings['ui_config'] = g_pool.gui.configuration
session_settings['capture_settings'] = g_pool.capture.settings
session_settings[
'capture_manager_settings'] = g_pool.capture_manager.class_name, g_pool.capture_manager.get_init_dict(
)
session_settings['window_size'] = glfw.glfwGetWindowSize(main_window)
session_settings['window_position'] = glfw.glfwGetWindowPos(
main_window)
session_settings['version'] = g_pool.version
session_settings[
'last_pupil_detector'] = g_pool.pupil_detector.__class__.__name__
session_settings[
'pupil_detector_settings'] = g_pool.pupil_detector.get_settings()
session_settings.close()
g_pool.capture.deinit_gui()
g_pool.pupil_detector.cleanup()
g_pool.gui.terminate()
glfw.glfwDestroyWindow(main_window)
glfw.glfwTerminate()
g_pool.capture_manager.cleanup()
g_pool.capture.cleanup()
logger.info("Process shutting down.")
def eye(timebase, is_alive_flag, ipc_pub_url, ipc_sub_url,ipc_push_url, user_dir, version, eye_id,overwrite_cap_settings=None):
"""reads eye video and detects the pupil.
Creates a window, gl context.
Grabs images from a capture.
Streams Pupil coordinates.
Reacts to notifications:
``set_detection_mapping_mode``: Sets detection method
``eye_process.should_stop``: Stops the eye process
``recording.started``: Starts recording eye video
``recording.stopped``: Stops recording eye video
``frame_publishing.started``: Starts frame publishing
``frame_publishing.stopped``: Stops frame publishing
Emits notifications:
``eye_process.started``: Eye process started
``eye_process.stopped``: Eye process stopped
Emits data:
``pupil.<eye id>``: Pupil data for eye with id ``<eye id>``
``frame.eye.<eye id>``: Eye frames with id ``<eye id>``
"""
# We deferr the imports becasue of multiprocessing.
# Otherwise the world process each process also loads the other imports.
import zmq
import zmq_tools
zmq_ctx = zmq.Context()
ipc_socket = zmq_tools.Msg_Dispatcher(zmq_ctx,ipc_push_url)
pupil_socket = zmq_tools.Msg_Streamer(zmq_ctx,ipc_pub_url)
notify_sub = zmq_tools.Msg_Receiver(zmq_ctx,ipc_sub_url,topics=("notify",))
with Is_Alive_Manager(is_alive_flag,ipc_socket,eye_id):
#logging setup
import logging
logging.getLogger("OpenGL").setLevel(logging.ERROR)
logger = logging.getLogger()
logger.handlers = []
logger.addHandler(zmq_tools.ZMQ_handler(zmq_ctx,ipc_push_url))
# create logger for the context of this function
logger = logging.getLogger(__name__)
#general imports
import numpy as np
import cv2
#display
import glfw
from pyglui import ui,graph,cygl
from pyglui.cygl.utils import draw_points, RGBA, draw_polyline, Named_Texture, Sphere
import OpenGL.GL as gl
from gl_utils import basic_gl_setup,adjust_gl_view, clear_gl_screen ,make_coord_system_pixel_based,make_coord_system_norm_based, make_coord_system_eye_camera_based,is_window_visible
from ui_roi import UIRoi
#monitoring
import psutil
import math
# helpers/utils
from uvc import get_time_monotonic, StreamError
from file_methods import Persistent_Dict
from version_utils import VersionFormat
from methods import normalize, denormalize, Roi, timer
from av_writer import JPEG_Writer,AV_Writer
from video_capture import InitialisationError,StreamError, Fake_Source,EndofVideoFileError, source_classes, manager_classes
source_by_name = {src.class_name():src for src in source_classes}
# Pupil detectors
from pupil_detectors import Detector_2D, Detector_3D
pupil_detectors = {Detector_2D.__name__:Detector_2D,Detector_3D.__name__:Detector_3D}
#UI Platform tweaks
if platform.system() == 'Linux':
scroll_factor = 10.0
window_position_default = (600,300*eye_id)
elif platform.system() == 'Windows':
scroll_factor = 1.0
window_position_default = (600,31+300*eye_id)
else:
scroll_factor = 1.0
window_position_default = (600,300*eye_id)
#g_pool holds variables for this process
g_pool = Global_Container()
# make some constants avaiable
g_pool.user_dir = user_dir
g_pool.version = version
g_pool.app = 'capture'
g_pool.timebase = timebase
g_pool.ipc_pub = ipc_socket
def get_timestamp():
return get_time_monotonic()-g_pool.timebase.value
g_pool.get_timestamp = get_timestamp
g_pool.get_now = get_time_monotonic
# Callback functions
def on_resize(window,w, h):
if is_window_visible(window):
active_window = glfw.glfwGetCurrentContext()
glfw.glfwMakeContextCurrent(window)
g_pool.gui.update_window(w,h)
graph.adjust_size(w,h)
adjust_gl_view(w,h)
glfw.glfwMakeContextCurrent(active_window)
def on_key(window, key, scancode, action, mods):
g_pool.gui.update_key(key,scancode,action,mods)
def on_char(window,char):
g_pool.gui.update_char(char)
def on_iconify(window,iconified):
g_pool.iconified = iconified
def on_button(window,button, action, mods):
if g_pool.display_mode == 'roi':
if action == glfw.GLFW_RELEASE and g_pool.u_r.active_edit_pt:
g_pool.u_r.active_edit_pt = False
return # if the roi interacts we dont what the gui to interact as well
elif action == glfw.GLFW_PRESS:
pos = glfw.glfwGetCursorPos(window)
pos = normalize(pos,glfw.glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1-pos[0],1-pos[1]
pos = denormalize(pos,(frame.width,frame.height)) # Position in img pixels
if g_pool.u_r.mouse_over_edit_pt(pos,g_pool.u_r.handle_size+40,g_pool.u_r.handle_size+40):
return # if the roi interacts we dont what the gui to interact as well
g_pool.gui.update_button(button,action,mods)
def on_pos(window,x, y):
hdpi_factor = float(glfw.glfwGetFramebufferSize(window)[0]/glfw.glfwGetWindowSize(window)[0])
g_pool.gui.update_mouse(x*hdpi_factor,y*hdpi_factor)
if g_pool.u_r.active_edit_pt:
pos = normalize((x,y),glfw.glfwGetWindowSize(main_window))
if g_pool.flip:
pos = 1-pos[0],1-pos[1]
pos = denormalize(pos,(frame.width,frame.height) )
g_pool.u_r.move_vertex(g_pool.u_r.active_pt_idx,pos)
def on_scroll(window,x,y):
g_pool.gui.update_scroll(x,y*scroll_factor)
# load session persistent settings
session_settings = Persistent_Dict(os.path.join(g_pool.user_dir,'user_settings_eye%s'%eye_id))
if session_settings.get("version",VersionFormat('0.0')) < g_pool.version:
logger.info("Session setting are from older version of this app. I will not use those.")
session_settings.clear()
capture_manager_settings = session_settings.get(
'capture_manager_settings', ('UVC_Manager',{}))
if eye_id == 0:
cap_src = ["Pupil Cam1 ID0","HD-6000","Integrated Camera","HD USB Camera","USB 2.0 Camera"]
else:
cap_src = ["Pupil Cam1 ID1","HD-6000","Integrated Camera"]
# Initialize capture
default_settings = {
'source_class_name': 'UVC_Source',
'preferred_names' : cap_src,
'frame_size': (640,480),
'frame_rate': 90
}
settings = overwrite_cap_settings or session_settings.get('capture_settings', default_settings)
try:
cap = source_by_name[settings['source_class_name']](g_pool, **settings)
except (KeyError,InitialisationError) as e:
if isinstance(e,KeyError):
logger.warning('Incompatible capture setting encountered. Falling back to fake source.')
cap = Fake_Source(g_pool, **settings)
g_pool.iconified = False
g_pool.capture = cap
g_pool.capture_manager = None
g_pool.flip = session_settings.get('flip',False)
g_pool.display_mode = session_settings.get('display_mode','camera_image')
g_pool.display_mode_info_text = {'camera_image': "Raw eye camera image. This uses the least amount of CPU power",
'roi': "Click and drag on the blue circles to adjust the region of interest. The region should be as small as possible, but large enough to capture all pupil movements.",
'algorithm': "Algorithm display mode overlays a visualization of the pupil detection parameters on top of the eye video. Adjust parameters within the Pupil Detection menu below."}
g_pool.u_r = UIRoi((g_pool.capture.frame_size[1],g_pool.capture.frame_size[0]))
roi_user_settings = session_settings.get('roi')
if roi_user_settings and roi_user_settings[-1] == g_pool.u_r.get()[-1]:
g_pool.u_r.set(roi_user_settings)
writer = None
pupil_detector_settings = session_settings.get('pupil_detector_settings',None)
last_pupil_detector = pupil_detectors[session_settings.get('last_pupil_detector',Detector_2D.__name__)]
g_pool.pupil_detector = last_pupil_detector(g_pool,pupil_detector_settings)
# UI callback functions
def set_scale(new_scale):
g_pool.gui.scale = new_scale
g_pool.gui.collect_menus()
def set_display_mode_info(val):
g_pool.display_mode = val
g_pool.display_mode_info.text = g_pool.display_mode_info_text[val]
def set_detector(new_detector):
g_pool.pupil_detector.cleanup()
g_pool.pupil_detector = new_detector(g_pool)
g_pool.pupil_detector.init_gui(g_pool.sidebar)
# Initialize glfw
glfw.glfwInit()
title = "eye %s"%eye_id
width,height = session_settings.get('window_size',g_pool.capture.frame_size)
main_window = glfw.glfwCreateWindow(width,height, title, None, None)
window_pos = session_settings.get('window_position',window_position_default)
glfw.glfwSetWindowPos(main_window,window_pos[0],window_pos[1])
glfw.glfwMakeContextCurrent(main_window)
cygl.utils.init()
# gl_state settings
basic_gl_setup()
g_pool.image_tex = Named_Texture()
glfw.glfwSwapInterval(0)
#setup GUI
g_pool.gui = ui.UI()
g_pool.gui.scale = session_settings.get('gui_scale',1)
g_pool.sidebar = ui.Scrolling_Menu("Settings",pos=(-300,0),size=(0,0),header_pos='left')
general_settings = ui.Growing_Menu('General')
general_settings.append(ui.Slider('scale',g_pool.gui, setter=set_scale,step = .05,min=1.,max=2.5,label='Interface Size'))
general_settings.append(ui.Button('Reset window size',lambda: glfw.glfwSetWindowSize(main_window,frame.width,frame.height)) )
general_settings.append(ui.Switch('flip',g_pool,label='Flip image display'))
general_settings.append(ui.Selector('display_mode',g_pool,setter=set_display_mode_info,selection=['camera_image','roi','algorithm'], labels=['Camera Image', 'ROI', 'Algorithm'], label="Mode") )
g_pool.display_mode_info = ui.Info_Text(g_pool.display_mode_info_text[g_pool.display_mode])
general_settings.append(g_pool.display_mode_info)
g_pool.gui.append(g_pool.sidebar)
detector_selector = ui.Selector('pupil_detector',getter = lambda: g_pool.pupil_detector.__class__ ,setter=set_detector,selection=[Detector_2D, Detector_3D],labels=['C++ 2d detector', 'C++ 3d detector'], label="Detection method")
general_settings.append(detector_selector)
g_pool.capture_selector_menu = ui.Growing_Menu('Capture Selection')
g_pool.capture_source_menu = ui.Growing_Menu('Capture Source')
g_pool.capture.init_gui()
g_pool.sidebar.append(general_settings)
g_pool.sidebar.append(g_pool.capture_selector_menu)
g_pool.sidebar.append(g_pool.capture_source_menu)
g_pool.pupil_detector.init_gui(g_pool.sidebar)
manager_class_name, manager_settings = capture_manager_settings
manager_class_by_name = {c.__name__:c for c in manager_classes}
g_pool.capture_manager = manager_class_by_name[manager_class_name](g_pool,**manager_settings)
g_pool.capture_manager.init_gui()
def open_manager(manager_class):
g_pool.capture_manager.cleanup()
g_pool.capture_manager = manager_class(g_pool)
g_pool.capture_manager.init_gui()
#We add the capture selection menu, after a manager has been added:
g_pool.capture_selector_menu.insert(0,ui.Selector(
'capture_manager',g_pool,
setter = open_manager,
getter = lambda: g_pool.capture_manager.__class__,
selection = manager_classes,
labels = [b.gui_name for b in manager_classes],
label = 'Manager'
))
# Register callbacks main_window
glfw.glfwSetFramebufferSizeCallback(main_window,on_resize)
glfw.glfwSetWindowIconifyCallback(main_window,on_iconify)
glfw.glfwSetKeyCallback(main_window,on_key)
glfw.glfwSetCharCallback(main_window,on_char)
glfw.glfwSetMouseButtonCallback(main_window,on_button)
glfw.glfwSetCursorPosCallback(main_window,on_pos)
glfw.glfwSetScrollCallback(main_window,on_scroll)
#set the last saved window size
on_resize(main_window, *glfw.glfwGetWindowSize(main_window))
# load last gui configuration
g_pool.gui.configuration = session_settings.get('ui_config',{})
#set up performance graphs
pid = os.getpid()
ps = psutil.Process(pid)
ts = g_pool.get_timestamp()
cpu_graph = graph.Bar_Graph()
cpu_graph.pos = (20,130)
cpu_graph.update_fn = ps.cpu_percent
cpu_graph.update_rate = 5
cpu_graph.label = 'CPU %0.1f'
fps_graph = graph.Bar_Graph()
fps_graph.pos = (140,130)
fps_graph.update_rate = 5
fps_graph.label = "%0.0f FPS"
should_publish_frames = False
frame_publish_format = 'jpeg'
#create a timer to control window update frequency
window_update_timer = timer(1/60.)
def window_should_update():
return next(window_update_timer)
logger.warning('Process started.')
# Event loop
while not glfw.glfwWindowShouldClose(main_window):
if notify_sub.new_data:
t,notification = notify_sub.recv()
subject = notification['subject']
if subject == 'eye_process.should_stop':
if notification['eye_id'] == eye_id:
break
elif subject == 'set_detection_mapping_mode':
if notification['mode'] == '3d':
if not isinstance(g_pool.pupil_detector,Detector_3D):
set_detector(Detector_3D)
detector_selector.read_only = True
else:
if not isinstance(g_pool.pupil_detector,Detector_2D):
set_detector(Detector_2D)
detector_selector.read_only = False
elif subject == 'recording.started':
if notification['record_eye']:
record_path = notification['rec_path']
raw_mode = notification['compression']
logger.info("Will save eye video to: %s"%record_path)
timestamps_path = os.path.join(record_path, "eye%s_timestamps.npy"%eye_id)
if raw_mode and frame.jpeg_buffer:
video_path = os.path.join(record_path, "eye%s.mp4"%eye_id)
writer = JPEG_Writer(video_path,g_pool.capture.frame_rate)
else:
video_path = os.path.join(record_path, "eye%s.mp4"%eye_id)
writer = AV_Writer(video_path,g_pool.capture.frame_rate)
timestamps = []
elif subject == 'recording.stopped':
if writer:
logger.info("Done recording.")
writer.release()
writer = None
np.save(timestamps_path,np.asarray(timestamps))
del timestamps
elif subject.startswith('meta.should_doc'):
ipc_socket.notify({
'subject':'meta.doc',
'actor':'eye%i'%eye_id,
'doc':eye.__doc__
})
elif subject.startswith('frame_publishing.started'):
should_publish_frames = True
frame_publish_format = notification.get('format','jpeg')
elif subject.startswith('frame_publishing.stopped'):
should_publish_frames = False
frame_publish_format = 'jpeg'
else:
g_pool.capture_manager.on_notify(notification)
# Get an image from the grabber
try:
frame = g_pool.capture.get_frame()
except StreamError as e:
logger.error("Error getting frame. Stopping eye process.")
logger.debug("Caught error: %s"%e)
break
except EndofVideoFileError:
logger.warning("Video File is done. Stopping")
g_pool.capture.seek_to_frame(0)
frame = g_pool.capture.get_frame()
g_pool.u_r = UIRoi((frame.height,frame.width))
g_pool.capture_manager.update(frame, {})
if should_publish_frames and frame.jpeg_buffer:
if frame_publish_format == "jpeg":
data = frame.jpeg_buffer
elif frame_publish_format == "yuv":
data = frame.yuv_buffer
elif frame_publish_format == "bgr":
data = frame.bgr
elif frame_publish_format == "gray":
data = frame.gray
pupil_socket.send('frame.eye.%s'%eye_id,{
'width': frame.width,
'height': frame.width,
'index': frame.index,
'timestamp': frame.timestamp,
'format': frame_publish_format,
'__raw_data__': [data]
})
#update performace graphs
t = frame.timestamp
dt,ts = t-ts,t
try:
fps_graph.add(1./dt)
except ZeroDivisionError:
pass
cpu_graph.update()
if writer:
writer.write_video_frame(frame)
timestamps.append(frame.timestamp)
# pupil ellipse detection
result = g_pool.pupil_detector.detect(frame, g_pool.u_r, g_pool.display_mode == 'algorithm')
result['id'] = eye_id
# stream the result
pupil_socket.send('pupil.%s'%eye_id,result)
# GL drawing
if window_should_update():
if is_window_visible(main_window):
glfw.glfwMakeContextCurrent(main_window)
clear_gl_screen()
# switch to work in normalized coordinate space
if g_pool.display_mode == 'algorithm':
g_pool.image_tex.update_from_ndarray(frame.img)
elif g_pool.display_mode in ('camera_image','roi'):
g_pool.image_tex.update_from_ndarray(frame.gray)
else:
pass
make_coord_system_norm_based(g_pool.flip)
g_pool.image_tex.draw()
window_size = glfw.glfwGetWindowSize(main_window)
make_coord_system_pixel_based((frame.height,frame.width,3),g_pool.flip)
g_pool.capture.gl_display()
if result['method'] == '3d c++':
eye_ball = result['projected_sphere']
try:
pts = cv2.ellipse2Poly( (int(eye_ball['center'][0]),int(eye_ball['center'][1])),
(int(eye_ball['axes'][0]/2),int(eye_ball['axes'][1]/2)),
int(eye_ball['angle']),0,360,8)
except ValueError as e:
pass
else:
draw_polyline(pts,2,RGBA(0.,.9,.1,result['model_confidence']) )
if result['confidence'] >0:
if result.has_key('ellipse'):
pts = cv2.ellipse2Poly( (int(result['ellipse']['center'][0]),int(result['ellipse']['center'][1])),
(int(result['ellipse']['axes'][0]/2),int(result['ellipse']['axes'][1]/2)),
int(result['ellipse']['angle']),0,360,15)
confidence = result['confidence'] * 0.7 #scale it a little
draw_polyline(pts,1,RGBA(1.,0,0,confidence))
draw_points([result['ellipse']['center']],size=20,color=RGBA(1.,0.,0.,confidence),sharpness=1.)
# render graphs
graph.push_view()
fps_graph.draw()
cpu_graph.draw()
graph.pop_view()
# render GUI
g_pool.gui.update()
#render the ROI
g_pool.u_r.draw(g_pool.gui.scale)
if g_pool.display_mode == 'roi':
g_pool.u_r.draw_points(g_pool.gui.scale)
#update screen
glfw.glfwSwapBuffers(main_window)
glfw.glfwPollEvents()
g_pool.pupil_detector.visualize() #detector decides if we visualize or not
# END while running
# in case eye recording was still runnnig: Save&close
if writer:
logger.info("Done recording eye.")
writer = None
np.save(timestamps_path,np.asarray(timestamps))
glfw.glfwRestoreWindow(main_window) #need to do this for windows os
# save session persistent settings
session_settings['gui_scale'] = g_pool.gui.scale
session_settings['roi'] = g_pool.u_r.get()
session_settings['flip'] = g_pool.flip
session_settings['display_mode'] = g_pool.display_mode
session_settings['ui_config'] = g_pool.gui.configuration
session_settings['capture_settings'] = g_pool.capture.settings
session_settings['capture_manager_settings'] = g_pool.capture_manager.class_name, g_pool.capture_manager.get_init_dict()
session_settings['window_size'] = glfw.glfwGetWindowSize(main_window)
session_settings['window_position'] = glfw.glfwGetWindowPos(main_window)
session_settings['version'] = g_pool.version
session_settings['last_pupil_detector'] = g_pool.pupil_detector.__class__.__name__
session_settings['pupil_detector_settings'] = g_pool.pupil_detector.get_settings()
session_settings.close()
g_pool.capture.deinit_gui()
g_pool.pupil_detector.cleanup()
g_pool.gui.terminate()
glfw.glfwDestroyWindow(main_window)
glfw.glfwTerminate()
g_pool.capture_manager.cleanup()
g_pool.capture.cleanup()
logger.info("Process shutting down.")