# GNU General Public License for more details. #
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_CPMG_SQ, MODEL_TSMFK01
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_SINGLE,
model=MODEL_TSMFK01,
r2a=5.0,
dw=3.0,
k_AB=10.0,
spins_params=['r2a', 'dw', 'k_AB'])
CLUSTER = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_CLUSTER,
model=MODEL_TSMFK01,
r2a=5.0,
dw=3.0,
k_AB=10.0,
spins_params=['r2a', 'dw', 'k_AB'])
# Execute main function.
if __name__ == "__main__":
main()
# #
# This file is part of the program relax (http://www.nmr-relax.com). #
# #
# This program is free software: you can redistribute it and/or modify #
# it under the terms of the GNU General Public License as published by #
# the Free Software Foundation, either version 3 of the License, or #
# (at your option) any later version. #
# #
# This program is distributed in the hope that it will be useful, #
# but WITHOUT ANY WARRANTY; without even the implied warranty of #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the #
# GNU General Public License for more details. #
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_CPMG_MQ, MODEL_NS_MMQ_3SITE_LINEAR
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_CPMG_MQ], num_spins=NUM_SPINS_SINGLE, model=MODEL_NS_MMQ_3SITE_LINEAR, r2=5.0, dw_AB=1.0, dw_BC=2.0, dwH_AB=0.01, dwH_BC=0.02, pA=0.8, kex_AB=5000.0, pB=0.1, kex_BC=3000.0, spins_params=['r2', 'dw_AB', 'dw_BC', 'dwH_AB', 'dwH_BC', 'pA', 'kex_AB', 'pB', 'kex_BC'])
CLUSTER = Profile(exp_type=[EXP_TYPE_CPMG_MQ], num_spins=NUM_SPINS_CLUSTER, model=MODEL_NS_MMQ_3SITE_LINEAR, r2=5.0, dw_AB=1.0, dw_BC=2.0, dwH_AB=0.01, dwH_BC=0.02, pA=0.8, kex_AB=5000.0, pB=0.1, kex_BC=3000.0, spins_params=['r2', 'dw_AB', 'dw_BC', 'dwH_AB', 'dwH_BC', 'pA', 'kex_AB', 'pB', 'kex_BC'])
# Execute main function.
if __name__ == "__main__":
main()
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_CPMG_SQ, MODEL_B14
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_SINGLE,
model=MODEL_B14,
r2a=5.0,
r2b=10.0,
dw=3.0,
pA=0.9,
kex=1000.0,
spins_params=['r2a', 'r2b', 'dw', 'pA', 'kex'])
CLUSTER = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_CLUSTER,
model=MODEL_B14,
r2a=5.0,
r2b=10.0,
dw=3.0,
pA=0.9,
kex=1000.0,
spins_params=['r2a', 'r2b', 'dw', 'pA', 'kex'])
# Execute main function.
# #
# This file is part of the program relax (http://www.nmr-relax.com). #
# #
# This program is free software: you can redistribute it and/or modify #
# it under the terms of the GNU General Public License as published by #
# the Free Software Foundation, either version 3 of the License, or #
# (at your option) any later version. #
# #
# This program is distributed in the hope that it will be useful, #
# but WITHOUT ANY WARRANTY; without even the implied warranty of #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the #
# GNU General Public License for more details. #
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_R1RHO, MODEL_NS_R1RHO_3SITE
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_R1RHO], num_spins=NUM_SPINS_SINGLE, model=MODEL_NS_R1RHO_3SITE, r2=5.0, dw_AB=1.0, dw_BC=2.0, pA=0.8, kex_AB=5000.0, pB=0.1, kex_BC=3000.0, kex_AC=1000.0, spins_params=['r2', 'dw_AB', 'dw_BC', 'pA', 'kex_AB', 'pB', 'kex_BC', 'kex_AC'])
CLUSTER = Profile(exp_type=[EXP_TYPE_R1RHO], num_spins=NUM_SPINS_CLUSTER, model=MODEL_NS_R1RHO_3SITE, r2=5.0, dw_AB=1.0, dw_BC=2.0, pA=0.8, kex_AB=5000.0, pB=0.1, kex_BC=3000.0, kex_AC=1000.0, spins_params=['r2', 'dw_AB', 'dw_BC', 'pA', 'kex_AB', 'pB', 'kex_BC', 'kex_AC'])
# Execute main function.
if __name__ == "__main__":
main()
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile, version_comparison
from lib.dispersion.variables import EXP_TYPE_CPMG_SQ, MODEL_IT99
from version import version
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_SINGLE,
model=MODEL_IT99,
r2=5.0,
dw=3.0,
pA=0.9,
tex=1 / 1000.0,
spins_params=['r2', 'dw', 'pA', 'tex'])
num_spins = NUM_SPINS_CLUSTER
if version != 'repository checkout' and version_comparison(version,
'3.2.2') != 1:
num_spins = NUM_SPINS_SINGLE
print(
"WARNING: Cluster of only 1 spin analysis, since v. 3.2.2 had a bug with clustering analysis."
)
CLUSTER = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=num_spins,
model=MODEL_IT99,
r2=5.0,
dw=3.0,
# GNU General Public License for more details. #
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_R1RHO, MODEL_DPL94
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_R1RHO],
num_spins=NUM_SPINS_SINGLE,
model=MODEL_DPL94,
r2=5.0,
phi_ex=1.0,
kex=5000.0,
spins_params=['r2', 'phi_ex', 'kex'])
CLUSTER = Profile(exp_type=[EXP_TYPE_R1RHO],
num_spins=NUM_SPINS_CLUSTER,
model=MODEL_DPL94,
r2=5.0,
phi_ex=1.0,
kex=5000.0,
spins_params=['r2', 'phi_ex', 'kex'])
# Execute main function.
if __name__ == "__main__":
main()
# GNU General Public License for more details. #
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_R1RHO, MODEL_NS_R1RHO_2SITE
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_R1RHO],
num_spins=NUM_SPINS_SINGLE,
model=MODEL_NS_R1RHO_2SITE,
r2=5.0,
dw=1.0,
pA=0.9,
kex=5000.0,
spins_params=['r2', 'dw', 'pA', 'kex'])
CLUSTER = Profile(exp_type=[EXP_TYPE_R1RHO],
num_spins=NUM_SPINS_CLUSTER,
model=MODEL_NS_R1RHO_2SITE,
r2=5.0,
dw=1.0,
pA=0.9,
kex=5000.0,
spins_params=['r2', 'dw', 'pA', 'kex'])
# Execute main function.
if __name__ == "__main__":
main()
# #
# This program is distributed in the hope that it will be useful, #
# but WITHOUT ANY WARRANTY; without even the implied warranty of #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the #
# GNU General Public License for more details. #
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_CPMG_SQ, MODEL_NOREX
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_SINGLE,
model=MODEL_NOREX,
r2=5.0,
spins_params=['r2'])
CLUSTER = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_CLUSTER,
model=MODEL_NOREX,
r2=5.0,
spins_params=['r2'])
# Execute main function.
if __name__ == "__main__":
main()
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_CPMG_MQ, MODEL_NS_MMQ_2SITE
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_CPMG_MQ],
num_spins=NUM_SPINS_SINGLE,
model=MODEL_NS_MMQ_2SITE,
r2=5.0,
dw=3.0,
dwH=0.03,
pA=0.9,
kex=1000.0,
spins_params=['r2', 'dw', 'dwH', 'pA', 'kex'])
CLUSTER = Profile(exp_type=[EXP_TYPE_CPMG_MQ],
num_spins=NUM_SPINS_CLUSTER,
model=MODEL_NS_MMQ_2SITE,
r2=5.0,
dw=3.0,
dwH=0.03,
pA=0.9,
kex=1000.0,
spins_params=['r2', 'dw', 'dwH', 'pA', 'kex'])
# Execute main function.
# GNU General Public License for more details. #
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_CPMG_SQ, MODEL_LM63
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_SINGLE,
model=MODEL_LM63,
r2=5.0,
phi_ex=3.0,
kex=1000.0,
spins_params=['r2', 'phi_ex', 'kex'])
CLUSTER = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_CLUSTER,
model=MODEL_LM63,
r2=5.0,
phi_ex=3.0,
kex=1000.0,
spins_params=['r2', 'phi_ex', 'kex'])
# Execute main function.
if __name__ == "__main__":
main()
class DummyTestReceiver(ProfileExecutor):
def is_supported(self):
return True
def prepare(self):
pass
def run(self):
self.collect_results()
def cleanup(self):
pass
p = Profile("dummy", "Dummy SpeedTest", DummyTestSender, DummyTestReceiver,
"A truly dummy test that returns some random numbers.")
p.supported_options.add_option('min_transfer',
'The minimum random value of transfer',
units.BitRate,
default=0)
p.supported_options.add_option('max_transfer',
'The maximum random value of transfer',
units.BitRate,
default=1)
p.supported_options.add_option('min_time',
'The minimum random value of time',
units.Time,
default=0)
p.supported_options.add_option('max_time',
'The maximum random value of time',
units.Time,
# #
# You should have received a copy of the GNU General Public License #
# along with this program. If not, see <http://www.gnu.org/licenses/>. #
# #
###############################################################################
# relax module imports.
from base import cluster, main, NUM_SPINS_CLUSTER, NUM_SPINS_SINGLE, single, Profile
from lib.dispersion.variables import EXP_TYPE_CPMG_SQ, MODEL_LM63_3SITE
# Setup.
SINGLE = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_SINGLE,
model=MODEL_LM63_3SITE,
r2=5.0,
phi_ex_B=3.0,
phi_ex_C=4.0,
kB=2000.0,
kC=1000.0,
spins_params=['r2', 'phi_ex_B', 'phi_ex_C', 'kB', 'kC'])
CLUSTER = Profile(exp_type=[EXP_TYPE_CPMG_SQ],
num_spins=NUM_SPINS_CLUSTER,
model=MODEL_LM63_3SITE,
r2=5.0,
phi_ex_B=3.0,
phi_ex_C=4.0,
kB=2000.0,
kC=1000.0,
spins_params=['r2', 'phi_ex_B', 'phi_ex_C', 'kB', 'kC'])
# Execute main function.
