def test__get_tool_path_raises(self, mock_mkdtemp):
self.setup_mkdtemp(mock_mkdtemp)
self.workflow_version.workflow_type = 'other'
loader = BespinWorkflowLoader(self.workflow_version)
with self.assertRaises(InvalidWorkflowFileException) as context:
tool_path = loader._get_tool_path()
self.assertIn('Workflow type other is not supported',
str(context.exception))
def test__get_tool_path_zipped(self, mock_mkdtemp):
self.setup_mkdtemp(mock_mkdtemp)
loader = BespinWorkflowLoader(self.zipped_workflow_version)
tool_path = loader._get_tool_path()
self.assertEqual(tool_path, '/tmpdir/unzipped/workflow.cwl')
def test__get_tool_path_direct(self, mock_mkdtemp):
self.setup_mkdtemp(mock_mkdtemp)
loader = BespinWorkflowLoader(self.direct_workflow_version)
tool_path = loader._get_tool_path()
self.assertEqual(tool_path, 'file:///direct/direct.cwl')
def test__get_tool_path_packed(self, mock_mkdtemp):
self.setup_mkdtemp(mock_mkdtemp)
loader = BespinWorkflowLoader(self.packed_workflow_version)
tool_path = loader._get_tool_path()
self.assertEqual(tool_path, '/tmpdir/packed.cwl#main')